EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSTOG00000006615 (Gene tree)
Gene ID: 101968466
Gene Symbol: EXOSC1
Alias: CGI-108|CSL4|Csl4p|SKI4|Ski4p|hCsl4p|p13
Full Name: exosome component 1
Gene Type: protein_coding
Species: Ictidomys_tridecemlineatus
Status: putative
Strand: Plus strand
Length: 7399 bases
Position: chrJH393446.1:2230737-2238135
Accession: 101968466
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSTOP00000028464	EXOSC1	PF10447.9	4.7e-15	1	1
ENSSTOP00000005898	ECR1_N	PF14382.6	3.2e-09	1	1
ENSSTOP00000028464	ECR1_N	PF14382.6	4.4e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSTOT00000041729	EXOSC1-201	1669	XM_005335270	ENSSTOP00000028464	195 (aa)	XP_005335327	A0A287D4L2
ENSSTOT00000006598	EXOSC1-202	465	-	ENSSTOP00000005898	154 (aa)	-	I3M874

Gene Model

Click here to download ENSSTOG00000006615's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSTOG00000006615's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSTOG00000006615	EXOSC1	63	84.426	ENSSTOG00000029860	-	93	84.426

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSTOG00000006615	EXOSC1	100	97.436	ENSG00000171311	EXOSC1	100	97.436	Homo_sapiens
ENSSTOG00000006615	EXOSC1	98	79.581	ENSAPOG00000007822	exosc1	98	79.581	Acanthochromis_polyacanthus
ENSSTOG00000006615	EXOSC1	100	98.974	ENSAMEG00000000129	EXOSC1	100	98.974	Ailuropoda_melanoleuca
ENSSTOG00000006615	EXOSC1	96	79.255	ENSACIG00000018956	exosc1	92	79.255	Amphilophus_citrinellus
ENSSTOG00000006615	EXOSC1	98	79.581	ENSAOCG00000010699	exosc1	98	79.581	Amphiprion_ocellaris
ENSSTOG00000006615	EXOSC1	92	70.391	ENSAPEG00000012690	exosc1	96	70.391	Amphiprion_percula
ENSSTOG00000006615	EXOSC1	98	79.058	ENSATEG00000018683	exosc1	98	79.058	Anabas_testudineus
ENSSTOG00000006615	EXOSC1	99	84.974	ENSACAG00000002101	EXOSC1	99	84.974	Anolis_carolinensis
ENSSTOG00000006615	EXOSC1	100	98.974	ENSANAG00000034669	EXOSC1	100	98.974	Aotus_nancymaae
ENSSTOG00000006615	EXOSC1	98	79.581	ENSACLG00000021243	exosc1	98	79.581	Astatotilapia_calliptera
ENSSTOG00000006615	EXOSC1	98	81.152	ENSAMXG00000011116	exosc1	98	81.152	Astyanax_mexicanus
ENSSTOG00000006615	EXOSC1	100	98.462	ENSBTAG00000012699	EXOSC1	100	98.462	Bos_taurus
ENSSTOG00000006615	EXOSC1	92	32.447	WBGene00012966	exos-1	90	32.447	Caenorhabditis_elegans
ENSSTOG00000006615	EXOSC1	100	98.701	ENSCJAG00000016586	EXOSC1	100	98.701	Callithrix_jacchus
ENSSTOG00000006615	EXOSC1	100	99.487	ENSCAFG00000009068	EXOSC1	94	99.487	Canis_familiaris
ENSSTOG00000006615	EXOSC1	100	99.487	ENSCAFG00020006002	EXOSC1	94	99.487	Canis_lupus_dingo
ENSSTOG00000006615	EXOSC1	100	98.462	ENSCHIG00000015253	EXOSC1	100	98.462	Capra_hircus
ENSSTOG00000006615	EXOSC1	100	97.949	ENSTSYG00000000760	EXOSC1	100	97.949	Carlito_syrichta
ENSSTOG00000006615	EXOSC1	100	98.462	ENSCPOG00000001173	EXOSC1	100	98.462	Cavia_porcellus
ENSSTOG00000006615	EXOSC1	100	59.627	ENSCCAG00000023986	EXOSC1	100	59.627	Cebus_capucinus
ENSSTOG00000006615	EXOSC1	100	97.436	ENSCATG00000034114	EXOSC1	100	97.436	Cercocebus_atys
ENSSTOG00000006615	EXOSC1	100	98.974	ENSCLAG00000002463	EXOSC1	100	98.974	Chinchilla_lanigera
ENSSTOG00000006615	EXOSC1	100	96.923	ENSCSAG00000005870	EXOSC1	100	96.923	Chlorocebus_sabaeus
ENSSTOG00000006615	EXOSC1	96	84.492	ENSCHOG00000006477	EXOSC1	100	84.492	Choloepus_hoffmanni
ENSSTOG00000006615	EXOSC1	54	81.132	ENSCPBG00000011949	EXOSC1	88	81.132	Chrysemys_picta_bellii
ENSSTOG00000006615	EXOSC1	95	56.150	ENSCING00000022734	-	89	56.150	Ciona_intestinalis
ENSSTOG00000006615	EXOSC1	95	57.219	ENSCSAVG00000010865	-	95	57.219	Ciona_savignyi
ENSSTOG00000006615	EXOSC1	100	97.436	ENSCANG00000034159	EXOSC1	100	97.436	Colobus_angolensis_palliatus
ENSSTOG00000006615	EXOSC1	100	98.052	ENSCGRG00001000335	Exosc1	100	98.052	Cricetulus_griseus_chok1gshd
ENSSTOG00000006615	EXOSC1	100	98.052	ENSCGRG00000011602	Exosc1	100	98.052	Cricetulus_griseus_crigri
ENSSTOG00000006615	EXOSC1	98	67.539	ENSCSEG00000007895	exosc1	95	67.539	Cynoglossus_semilaevis
ENSSTOG00000006615	EXOSC1	98	75.521	ENSCVAG00000016748	exosc1	99	75.521	Cyprinodon_variegatus
ENSSTOG00000006615	EXOSC1	98	80.105	ENSDARG00000059841	exosc1	98	80.105	Danio_rerio
ENSSTOG00000006615	EXOSC1	75	98.649	ENSDNOG00000007983	EXOSC1	100	98.649	Dasypus_novemcinctus
ENSSTOG00000006615	EXOSC1	100	97.949	ENSDORG00000016528	Exosc1	100	97.949	Dipodomys_ordii
ENSSTOG00000006615	EXOSC1	94	48.677	FBgn0032346	Csl4	92	48.677	Drosophila_melanogaster
ENSSTOG00000006615	EXOSC1	100	95.897	ENSETEG00000002469	-	100	95.897	Echinops_telfairi
ENSSTOG00000006615	EXOSC1	99	62.755	ENSEBUG00000008164	exosc1	98	62.755	Eptatretus_burgeri
ENSSTOG00000006615	EXOSC1	100	88.718	ENSEASG00005008684	EXOSC1	100	88.718	Equus_asinus_asinus
ENSSTOG00000006615	EXOSC1	61	78.992	ENSECAG00000010621	EXOSC1	71	78.992	Equus_caballus
ENSSTOG00000006615	EXOSC1	100	97.949	ENSEEUG00000005647	EXOSC1	100	97.949	Erinaceus_europaeus
ENSSTOG00000006615	EXOSC1	94	80.435	ENSELUG00000017369	exosc1	81	80.435	Esox_lucius
ENSSTOG00000006615	EXOSC1	100	98.974	ENSFCAG00000040563	EXOSC1	94	98.974	Felis_catus
ENSSTOG00000006615	EXOSC1	100	83.077	ENSFALG00000008450	EXOSC1	100	83.077	Ficedula_albicollis
ENSSTOG00000006615	EXOSC1	100	98.974	ENSFDAG00000000846	EXOSC1	100	98.974	Fukomys_damarensis
ENSSTOG00000006615	EXOSC1	98	75.521	ENSFHEG00000009154	exosc1	99	75.521	Fundulus_heteroclitus
ENSSTOG00000006615	EXOSC1	98	79.581	ENSGMOG00000008993	exosc1	98	79.581	Gadus_morhua
ENSSTOG00000006615	EXOSC1	100	72.821	ENSGALG00000039917	EXOSC1	100	86.301	Gallus_gallus
ENSSTOG00000006615	EXOSC1	98	75.521	ENSGAFG00000010265	exosc1	94	75.521	Gambusia_affinis
ENSSTOG00000006615	EXOSC1	98	79.581	ENSGACG00000018936	exosc1	98	79.581	Gasterosteus_aculeatus
ENSSTOG00000006615	EXOSC1	100	84.615	ENSGAGG00000019192	EXOSC1	100	84.615	Gopherus_agassizii
ENSSTOG00000006615	EXOSC1	100	85.128	ENSGGOG00000003099	EXOSC1	100	85.128	Gorilla_gorilla
ENSSTOG00000006615	EXOSC1	98	79.581	ENSHBUG00000017857	exosc1	98	79.581	Haplochromis_burtoni
ENSSTOG00000006615	EXOSC1	100	98.701	ENSHGLG00000016927	EXOSC1	100	98.701	Heterocephalus_glaber_female
ENSSTOG00000006615	EXOSC1	100	98.701	ENSHGLG00100012208	EXOSC1	100	98.701	Heterocephalus_glaber_male
ENSSTOG00000006615	EXOSC1	98	78.534	ENSHCOG00000019882	exosc1	98	78.534	Hippocampus_comes
ENSSTOG00000006615	EXOSC1	98	80.105	ENSIPUG00000007685	exosc1	98	80.105	Ictalurus_punctatus
ENSSTOG00000006615	EXOSC1	100	97.949	ENSJJAG00000013311	Exosc1	100	97.949	Jaculus_jaculus
ENSSTOG00000006615	EXOSC1	98	77.604	ENSKMAG00000001202	exosc1	81	77.604	Kryptolebias_marmoratus
ENSSTOG00000006615	EXOSC1	98	79.058	ENSLBEG00000011448	exosc1	98	79.058	Labrus_bergylta
ENSSTOG00000006615	EXOSC1	98	73.885	ENSLOCG00000003776	exosc1	99	73.885	Lepisosteus_oculatus
ENSSTOG00000006615	EXOSC1	100	97.949	ENSLAFG00000015983	EXOSC1	100	97.949	Loxodonta_africana
ENSSTOG00000006615	EXOSC1	100	97.436	ENSMFAG00000001493	EXOSC1	100	97.436	Macaca_fascicularis
ENSSTOG00000006615	EXOSC1	100	97.436	ENSMMUG00000020028	EXOSC1	100	97.403	Macaca_mulatta
ENSSTOG00000006615	EXOSC1	100	97.436	ENSMNEG00000029816	EXOSC1	100	97.436	Macaca_nemestrina
ENSSTOG00000006615	EXOSC1	100	97.403	ENSMLEG00000027643	EXOSC1	100	97.403	Mandrillus_leucophaeus
ENSSTOG00000006615	EXOSC1	98	79.688	ENSMAMG00000012200	exosc1	99	79.688	Mastacembelus_armatus
ENSSTOG00000006615	EXOSC1	98	79.581	ENSMZEG00005007042	exosc1	98	79.581	Maylandia_zebra
ENSSTOG00000006615	EXOSC1	100	85.641	ENSMAUG00000020462	-	100	85.641	Mesocricetus_auratus
ENSSTOG00000006615	EXOSC1	100	98.462	ENSMICG00000007664	EXOSC1	100	98.052	Microcebus_murinus
ENSSTOG00000006615	EXOSC1	100	98.052	ENSMOCG00000006004	-	100	98.052	Microtus_ochrogaster
ENSSTOG00000006615	EXOSC1	97	91.053	ENSMOCG00000017124	-	97	91.053	Microtus_ochrogaster
ENSSTOG00000006615	EXOSC1	99	75.817	ENSMMOG00000021403	exosc1	99	75.817	Mola_mola
ENSSTOG00000006615	EXOSC1	100	93.367	ENSMODG00000004213	EXOSC1	100	93.367	Monodelphis_domestica
ENSSTOG00000006615	EXOSC1	94	80.435	ENSMALG00000007061	exosc1	92	80.435	Monopterus_albus
ENSSTOG00000006615	EXOSC1	100	97.403	MGP_CAROLIEiJ_G0022959	Exosc1	100	97.403	Mus_caroli
ENSSTOG00000006615	EXOSC1	100	96.753	ENSMUSG00000034321	Exosc1	100	96.753	Mus_musculus
ENSSTOG00000006615	EXOSC1	100	98.052	MGP_PahariEiJ_G0014449	Exosc1	100	98.052	Mus_pahari
ENSSTOG00000006615	EXOSC1	100	97.403	MGP_SPRETEiJ_G0023880	Exosc1	100	97.403	Mus_spretus
ENSSTOG00000006615	EXOSC1	100	98.974	ENSMPUG00000017044	EXOSC1	100	98.974	Mustela_putorius_furo
ENSSTOG00000006615	EXOSC1	100	98.462	ENSMLUG00000009228	EXOSC1	100	98.462	Myotis_lucifugus
ENSSTOG00000006615	EXOSC1	100	96.410	ENSNGAG00000022033	Exosc1	100	96.410	Nannospalax_galili
ENSSTOG00000006615	EXOSC1	98	76.159	ENSNBRG00000024007	exosc1	98	76.159	Neolamprologus_brichardi
ENSSTOG00000006615	EXOSC1	100	97.403	ENSNLEG00000013872	EXOSC1	100	97.403	Nomascus_leucogenys
ENSSTOG00000006615	EXOSC1	59	92.174	ENSMEUG00000002246	EXOSC1	100	92.174	Notamacropus_eugenii
ENSSTOG00000006615	EXOSC1	100	96.923	ENSOPRG00000005065	EXOSC1	100	96.923	Ochotona_princeps
ENSSTOG00000006615	EXOSC1	100	98.462	ENSODEG00000016709	EXOSC1	100	98.462	Octodon_degus
ENSSTOG00000006615	EXOSC1	98	79.581	ENSONIG00000017683	exosc1	98	79.581	Oreochromis_niloticus
ENSSTOG00000006615	EXOSC1	59	93.913	ENSOANG00000006563	EXOSC1	98	91.935	Ornithorhynchus_anatinus
ENSSTOG00000006615	EXOSC1	100	97.959	ENSOCUG00000011898	-	100	97.959	Oryctolagus_cuniculus
ENSSTOG00000006615	EXOSC1	100	92.821	ENSOCUG00000026461	-	100	92.821	Oryctolagus_cuniculus
ENSSTOG00000006615	EXOSC1	98	78.125	ENSORLG00000011595	exosc1	98	78.125	Oryzias_latipes
ENSSTOG00000006615	EXOSC1	98	78.125	ENSORLG00020005831	exosc1	98	78.125	Oryzias_latipes_hni
ENSSTOG00000006615	EXOSC1	98	78.125	ENSORLG00015004317	exosc1	98	78.125	Oryzias_latipes_hsok
ENSSTOG00000006615	EXOSC1	97	64.162	ENSOMEG00000013907	exosc1	98	64.162	Oryzias_melastigma
ENSSTOG00000006615	EXOSC1	100	97.949	ENSOGAG00000016259	EXOSC1	100	97.949	Otolemur_garnettii
ENSSTOG00000006615	EXOSC1	100	97.949	ENSOARG00000010136	EXOSC1	100	97.949	Ovis_aries
ENSSTOG00000006615	EXOSC1	100	97.403	ENSPPAG00000039842	EXOSC1	100	97.403	Pan_paniscus
ENSSTOG00000006615	EXOSC1	100	98.974	ENSPPRG00000023366	EXOSC1	100	98.974	Panthera_pardus
ENSSTOG00000006615	EXOSC1	100	98.974	ENSPTIG00000017701	EXOSC1	100	98.974	Panthera_tigris_altaica
ENSSTOG00000006615	EXOSC1	100	97.436	ENSPTRG00000002808	EXOSC1	100	97.436	Pan_troglodytes
ENSSTOG00000006615	EXOSC1	100	97.436	ENSPANG00000021324	EXOSC1	100	97.436	Papio_anubis
ENSSTOG00000006615	EXOSC1	98	80.628	ENSPKIG00000016037	exosc1	98	80.628	Paramormyrops_kingsleyae
ENSSTOG00000006615	EXOSC1	75	81.507	ENSPSIG00000013571	EXOSC1	98	81.148	Pelodiscus_sinensis
ENSSTOG00000006615	EXOSC1	98	68.586	ENSPMGG00000014002	exosc1	98	68.586	Periophthalmus_magnuspinnatus
ENSSTOG00000006615	EXOSC1	100	98.052	ENSPEMG00000010710	-	100	98.052	Peromyscus_maniculatus_bairdii
ENSSTOG00000006615	EXOSC1	95	71.123	ENSPMAG00000000195	exosc1	95	71.123	Petromyzon_marinus
ENSSTOG00000006615	EXOSC1	100	94.359	ENSPCIG00000002210	EXOSC1	99	94.359	Phascolarctos_cinereus
ENSSTOG00000006615	EXOSC1	98	75.000	ENSPFOG00000006755	exosc1	94	75.000	Poecilia_formosa
ENSSTOG00000006615	EXOSC1	98	75.000	ENSPLAG00000005880	exosc1	99	75.000	Poecilia_latipinna
ENSSTOG00000006615	EXOSC1	98	75.000	ENSPMEG00000015598	exosc1	94	75.000	Poecilia_mexicana
ENSSTOG00000006615	EXOSC1	98	66.146	ENSPREG00000000405	exosc1	93	66.146	Poecilia_reticulata
ENSSTOG00000006615	EXOSC1	100	96.923	ENSPPYG00000002531	EXOSC1	100	96.923	Pongo_abelii
ENSSTOG00000006615	EXOSC1	100	97.949	ENSPCAG00000009135	EXOSC1	100	97.949	Procavia_capensis
ENSSTOG00000006615	EXOSC1	100	92.308	ENSPCOG00000027539	EXOSC1	100	92.308	Propithecus_coquereli
ENSSTOG00000006615	EXOSC1	100	98.974	ENSPVAG00000003372	EXOSC1	100	98.974	Pteropus_vampyrus
ENSSTOG00000006615	EXOSC1	98	79.581	ENSPNYG00000021745	exosc1	98	79.581	Pundamilia_nyererei
ENSSTOG00000006615	EXOSC1	98	80.105	ENSPNAG00000001944	exosc1	98	80.105	Pygocentrus_nattereri
ENSSTOG00000006615	EXOSC1	100	98.052	ENSRNOG00000048708	Exosc1	100	98.052	Rattus_norvegicus
ENSSTOG00000006615	EXOSC1	100	97.436	ENSRBIG00000035618	EXOSC1	100	97.436	Rhinopithecus_bieti
ENSSTOG00000006615	EXOSC1	100	97.436	ENSRROG00000032589	EXOSC1	100	97.403	Rhinopithecus_roxellana
ENSSTOG00000006615	EXOSC1	100	98.974	ENSSBOG00000000359	EXOSC1	100	98.974	Saimiri_boliviensis_boliviensis
ENSSTOG00000006615	EXOSC1	75	97.279	ENSSHAG00000018219	EXOSC1	100	97.279	Sarcophilus_harrisii
ENSSTOG00000006615	EXOSC1	98	81.771	ENSSFOG00015009069	exosc1	99	81.771	Scleropages_formosus
ENSSTOG00000006615	EXOSC1	97	77.368	ENSSFOG00015016289	-	98	77.368	Scleropages_formosus
ENSSTOG00000006615	EXOSC1	98	80.105	ENSSMAG00000003721	exosc1	98	80.105	Scophthalmus_maximus
ENSSTOG00000006615	EXOSC1	98	80.105	ENSSDUG00000002993	exosc1	98	80.105	Seriola_dumerili
ENSSTOG00000006615	EXOSC1	98	80.105	ENSSLDG00000025181	exosc1	98	80.105	Seriola_lalandi_dorsalis
ENSSTOG00000006615	EXOSC1	100	84.615	ENSSARG00000000162	EXOSC1	100	84.615	Sorex_araneus
ENSSTOG00000006615	EXOSC1	99	82.990	ENSSPUG00000012263	EXOSC1	99	82.990	Sphenodon_punctatus
ENSSTOG00000006615	EXOSC1	98	71.204	ENSSPAG00000016792	exosc1	82	71.204	Stegastes_partitus
ENSSTOG00000006615	EXOSC1	100	97.949	ENSSSCG00000010518	EXOSC1	91	97.949	Sus_scrofa
ENSSTOG00000006615	EXOSC1	98	81.250	ENSTGUG00000009692	EXOSC1	99	81.250	Taeniopygia_guttata
ENSSTOG00000006615	EXOSC1	97	73.545	ENSTRUG00000007706	exosc1	98	73.545	Takifugu_rubripes
ENSSTOG00000006615	EXOSC1	97	73.057	ENSTNIG00000014079	exosc1	97	73.057	Tetraodon_nigroviridis
ENSSTOG00000006615	EXOSC1	100	89.744	ENSTBEG00000006011	EXOSC1	100	89.744	Tupaia_belangeri
ENSSTOG00000006615	EXOSC1	94	98.370	ENSTTRG00000009887	EXOSC1	100	98.370	Tursiops_truncatus
ENSSTOG00000006615	EXOSC1	100	84.516	ENSUAMG00000010266	EXOSC1	100	84.516	Ursus_americanus
ENSSTOG00000006615	EXOSC1	100	84.516	ENSUMAG00000022002	EXOSC1	100	84.516	Ursus_maritimus
ENSSTOG00000006615	EXOSC1	100	99.487	ENSVVUG00000023192	EXOSC1	63	99.487	Vulpes_vulpes
ENSSTOG00000006615	EXOSC1	98	78.646	ENSXETG00000003434	exosc1	99	78.646	Xenopus_tropicalis
ENSSTOG00000006615	EXOSC1	62	85.000	ENSXCOG00000014499	exosc1	92	85.000	Xiphophorus_couchianus
ENSSTOG00000006615	EXOSC1	98	66.667	ENSXMAG00000023382	exosc1	93	66.667	Xiphophorus_maculatus