EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSTOG00000006620 (Gene tree)
Gene ID: 101965324
Gene Symbol: RAB5C
Alias: RAB5CL|RABL
Full Name: RAB5C%2C member RAS oncogene family
Gene Type: protein_coding
Species: Ictidomys_tridecemlineatus
Status: putative
Strand: Minus strand
Length: 24106 bases
Position: chrJH393300.1:16960917-16985022
Accession: 101965324
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSTOP00000027419	MMR_HSR1	PF01926.23	0.0001	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSTOT00000040910	RAB5C-201	3591	XM_005321871	ENSSTOP00000027419	216 (aa)	XP_005321928	A0A287D1K5
ENSSTOT00000006607	RAB5C-202	702	-	ENSSTOP00000005907	233 (aa)	-	I3M882

Gene Model

Click here to download ENSSTOG00000006620's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSTOG00000006620's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSTOG00000006620	RAB5C	80	35.260	ENSSTOG00000010962	RAB23	73	35.260
ENSSTOG00000006620	RAB5C	89	37.500	ENSSTOG00000011222	-	95	37.500
ENSSTOG00000006620	RAB5C	77	32.934	ENSSTOG00000009530	KRAS	90	32.164
ENSSTOG00000006620	RAB5C	77	42.442	ENSSTOG00000028487	RAB7A	83	42.442
ENSSTOG00000006620	RAB5C	78	33.140	ENSSTOG00000023505	RERG	84	33.140
ENSSTOG00000006620	RAB5C	95	31.839	ENSSTOG00000008444	RAB36	83	31.839
ENSSTOG00000006620	RAB5C	90	39.604	ENSSTOG00000001886	RAB2B	94	39.604
ENSSTOG00000006620	RAB5C	89	34.848	ENSSTOG00000024550	RAB9A	97	34.848
ENSSTOG00000006620	RAB5C	81	33.702	ENSSTOG00000021206	HRAS	94	33.702
ENSSTOG00000006620	RAB5C	89	34.848	ENSSTOG00000004081	RAB9B	97	34.848
ENSSTOG00000006620	RAB5C	72	33.121	ENSSTOG00000004544	RHEB	85	33.121
ENSSTOG00000006620	RAB5C	100	86.574	ENSSTOG00000026229	RAB5A	100	86.574
ENSSTOG00000006620	RAB5C	55	31.148	ENSSTOG00000013990	-	62	31.148
ENSSTOG00000006620	RAB5C	55	32.787	ENSSTOG00000009294	ARL8B	62	32.787
ENSSTOG00000006620	RAB5C	84	34.426	ENSSTOG00000011237	RAB39B	86	34.426
ENSSTOG00000006620	RAB5C	75	45.062	ENSSTOG00000014560	-	78	45.062
ENSSTOG00000006620	RAB5C	89	43.590	ENSSTOG00000020693	-	96	43.590
ENSSTOG00000006620	RAB5C	90	41.748	ENSSTOG00000031571	RAB11B	94	41.748
ENSSTOG00000006620	RAB5C	81	44.000	ENSSTOG00000023497	RAB6A	84	44.000
ENSSTOG00000006620	RAB5C	74	39.623	ENSSTOG00000000861	RAB15	75	39.623
ENSSTOG00000006620	RAB5C	73	31.250	ENSSTOG00000025062	RAB34	62	31.250
ENSSTOG00000006620	RAB5C	93	38.164	ENSSTOG00000027511	RAB33B	89	38.164
ENSSTOG00000006620	RAB5C	72	37.888	ENSSTOG00000000084	-	74	37.888
ENSSTOG00000006620	RAB5C	75	40.361	ENSSTOG00000008386	RAB33A	70	40.361
ENSSTOG00000006620	RAB5C	97	84.689	ENSSTOG00000010536	RAB5B	97	84.689
ENSSTOG00000006620	RAB5C	89	43.878	ENSSTOG00000011052	RAB1B	96	43.878
ENSSTOG00000006620	RAB5C	53	39.130	ENSSTOG00000002723	-	51	39.130
ENSSTOG00000006620	RAB5C	86	39.785	ENSSTOG00000025248	RAB14	87	39.785
ENSSTOG00000006620	RAB5C	86	38.095	ENSSTOG00000025122	RAB12	96	36.444
ENSSTOG00000006620	RAB5C	83	30.556	ENSSTOG00000023151	NRAS	94	30.556
ENSSTOG00000006620	RAB5C	90	41.262	ENSSTOG00000015255	RAB11A	94	41.262
ENSSTOG00000006620	RAB5C	78	42.012	ENSSTOG00000020966	RAB30	83	42.012
ENSSTOG00000006620	RAB5C	89	41.791	ENSSTOG00000000634	RAB25	93	41.791
ENSSTOG00000006620	RAB5C	81	44.571	ENSSTOG00000014123	RAB6B	84	44.571

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSTOG00000006620	RAB5C	100	97.685	ENSG00000108774	RAB5C	100	100.000	Homo_sapiens
ENSSTOG00000006620	RAB5C	99	88.837	ENSAPOG00000016864	rab5c	98	90.698	Acanthochromis_polyacanthus
ENSSTOG00000006620	RAB5C	100	97.685	ENSAMEG00000006003	RAB5C	100	97.685	Ailuropoda_melanoleuca
ENSSTOG00000006620	RAB5C	99	88.426	ENSACIG00000010896	rab5c	98	89.815	Amphilophus_citrinellus
ENSSTOG00000006620	RAB5C	99	88.889	ENSAOCG00000016614	rab5c	98	90.741	Amphiprion_ocellaris
ENSSTOG00000006620	RAB5C	97	88.626	ENSAPEG00000017868	-	97	90.521	Amphiprion_percula
ENSSTOG00000006620	RAB5C	100	89.450	ENSATEG00000001937	rab5c	100	90.367	Anabas_testudineus
ENSSTOG00000006620	RAB5C	94	98.039	ENSANAG00000025390	RAB5C	100	98.039	Aotus_nancymaae
ENSSTOG00000006620	RAB5C	99	87.500	ENSACLG00000002706	rab5c	98	89.815	Astatotilapia_calliptera
ENSSTOG00000006620	RAB5C	96	89.100	ENSACLG00000008615	-	99	88.584	Astatotilapia_calliptera
ENSSTOG00000006620	RAB5C	99	89.401	ENSAMXG00000043717	rab5c	98	90.783	Astyanax_mexicanus
ENSSTOG00000006620	RAB5C	96	89.048	ENSAMXG00000037267	-	99	90.476	Astyanax_mexicanus
ENSSTOG00000006620	RAB5C	100	97.685	ENSBTAG00000006982	RAB5C	100	97.685	Bos_taurus
ENSSTOG00000006620	RAB5C	99	76.279	WBGene00004268	rab-5	99	76.279	Caenorhabditis_elegans
ENSSTOG00000006620	RAB5C	100	97.222	ENSCAFG00000015629	RAB5C	100	97.222	Canis_familiaris
ENSSTOG00000006620	RAB5C	100	97.222	ENSCAFG00020013537	RAB5C	100	97.222	Canis_lupus_dingo
ENSSTOG00000006620	RAB5C	100	97.685	ENSCHIG00000012960	RAB5C	100	97.685	Capra_hircus
ENSSTOG00000006620	RAB5C	100	98.148	ENSTSYG00000030531	RAB5C	100	98.148	Carlito_syrichta
ENSSTOG00000006620	RAB5C	100	98.148	ENSCCAG00000025940	RAB5C	100	98.148	Cebus_capucinus
ENSSTOG00000006620	RAB5C	100	97.685	ENSCATG00000040873	RAB5C	100	97.685	Cercocebus_atys
ENSSTOG00000006620	RAB5C	100	96.759	ENSCLAG00000016650	RAB5C	100	96.759	Chinchilla_lanigera
ENSSTOG00000006620	RAB5C	82	99.438	ENSCHOG00000009886	RAB5C	100	99.438	Choloepus_hoffmanni
ENSSTOG00000006620	RAB5C	99	76.168	ENSCING00000003340	-	99	76.168	Ciona_intestinalis
ENSSTOG00000006620	RAB5C	99	74.545	ENSCSAVG00000000613	-	99	83.333	Ciona_savignyi
ENSSTOG00000006620	RAB5C	100	97.685	ENSCGRG00001014226	Rab5c	100	97.685	Cricetulus_griseus_chok1gshd
ENSSTOG00000006620	RAB5C	100	97.685	ENSCGRG00000007534	Rab5c	100	97.685	Cricetulus_griseus_crigri
ENSSTOG00000006620	RAB5C	99	90.278	ENSCSEG00000017024	rab5c	98	90.278	Cynoglossus_semilaevis
ENSSTOG00000006620	RAB5C	99	88.889	ENSCVAG00000009550	rab5c	98	90.278	Cyprinodon_variegatus
ENSSTOG00000006620	RAB5C	100	97.222	ENSDNOG00000038853	RAB5C	100	97.222	Dasypus_novemcinctus
ENSSTOG00000006620	RAB5C	100	97.222	ENSDORG00000006819	Rab5c	100	97.222	Dipodomys_ordii
ENSSTOG00000006620	RAB5C	99	74.074	FBgn0014010	Rab5	95	74.074	Drosophila_melanogaster
ENSSTOG00000006620	RAB5C	99	79.070	ENSEBUG00000014794	rab5c	100	79.070	Eptatretus_burgeri
ENSSTOG00000006620	RAB5C	100	97.685	ENSEASG00005009281	RAB5C	100	97.685	Equus_asinus_asinus
ENSSTOG00000006620	RAB5C	100	98.148	ENSECAG00000025054	RAB5C	100	98.148	Equus_caballus
ENSSTOG00000006620	RAB5C	100	97.685	ENSEEUG00000002790	RAB5C	100	97.685	Erinaceus_europaeus
ENSSTOG00000006620	RAB5C	99	87.963	ENSELUG00000010439	-	98	87.963	Esox_lucius
ENSSTOG00000006620	RAB5C	99	87.500	ENSELUG00000018516	rab5c	99	89.352	Esox_lucius
ENSSTOG00000006620	RAB5C	100	97.685	ENSFCAG00000002148	RAB5C	100	97.685	Felis_catus
ENSSTOG00000006620	RAB5C	100	94.907	ENSFDAG00000021541	RAB5C	100	94.907	Fukomys_damarensis
ENSSTOG00000006620	RAB5C	99	90.783	ENSFHEG00000015268	-	99	90.783	Fundulus_heteroclitus
ENSSTOG00000006620	RAB5C	99	88.889	ENSFHEG00000012117	rab5c	98	90.278	Fundulus_heteroclitus
ENSSTOG00000006620	RAB5C	99	87.500	ENSGMOG00000015096	rab5c	98	89.815	Gadus_morhua
ENSSTOG00000006620	RAB5C	78	88.166	ENSGMOG00000001876	-	98	88.166	Gadus_morhua
ENSSTOG00000006620	RAB5C	99	89.352	ENSGAFG00000000884	rab5c	98	90.741	Gambusia_affinis
ENSSTOG00000006620	RAB5C	96	90.952	ENSGAFG00000003642	-	99	88.182	Gambusia_affinis
ENSSTOG00000006620	RAB5C	87	94.681	ENSGACG00000008659	rab5c	98	86.697	Gasterosteus_aculeatus
ENSSTOG00000006620	RAB5C	100	97.685	ENSGGOG00000005472	RAB5C	100	97.685	Gorilla_gorilla
ENSSTOG00000006620	RAB5C	99	87.500	ENSHBUG00000002014	rab5c	98	89.815	Haplochromis_burtoni
ENSSTOG00000006620	RAB5C	96	89.100	ENSHBUG00000006823	-	99	88.584	Haplochromis_burtoni
ENSSTOG00000006620	RAB5C	100	94.444	ENSHGLG00000012067	RAB5C	100	94.444	Heterocephalus_glaber_female
ENSSTOG00000006620	RAB5C	97	82.547	ENSHCOG00000020238	-	100	80.909	Hippocampus_comes
ENSSTOG00000006620	RAB5C	99	89.401	ENSHCOG00000004662	rab5c	97	90.323	Hippocampus_comes
ENSSTOG00000006620	RAB5C	96	86.854	ENSIPUG00000020082	rab5c	98	87.783	Ictalurus_punctatus
ENSSTOG00000006620	RAB5C	100	97.685	ENSJJAG00000021181	Rab5c	100	97.685	Jaculus_jaculus
ENSSTOG00000006620	RAB5C	99	88.018	ENSKMAG00000017417	-	99	88.018	Kryptolebias_marmoratus
ENSSTOG00000006620	RAB5C	99	88.426	ENSKMAG00000020038	rab5c	98	90.278	Kryptolebias_marmoratus
ENSSTOG00000006620	RAB5C	100	87.615	ENSLBEG00000010408	-	99	87.615	Labrus_bergylta
ENSSTOG00000006620	RAB5C	99	89.815	ENSLBEG00000004128	rab5c	98	91.204	Labrus_bergylta
ENSSTOG00000006620	RAB5C	99	93.458	ENSLOCG00000012566	rab5c	100	93.458	Lepisosteus_oculatus
ENSSTOG00000006620	RAB5C	100	97.685	ENSMFAG00000039627	RAB5C	100	97.685	Macaca_fascicularis
ENSSTOG00000006620	RAB5C	100	97.685	ENSMNEG00000000355	RAB5C	100	97.685	Macaca_nemestrina
ENSSTOG00000006620	RAB5C	99	88.018	ENSMAMG00000016207	-	99	88.018	Mastacembelus_armatus
ENSSTOG00000006620	RAB5C	99	87.963	ENSMAMG00000022322	rab5c	98	89.815	Mastacembelus_armatus
ENSSTOG00000006620	RAB5C	96	89.100	ENSMZEG00005021090	-	99	88.584	Maylandia_zebra
ENSSTOG00000006620	RAB5C	99	87.500	ENSMZEG00005022735	rab5c	98	89.815	Maylandia_zebra
ENSSTOG00000006620	RAB5C	100	98.611	ENSMAUG00000015005	Rab5c	100	98.611	Mesocricetus_auratus
ENSSTOG00000006620	RAB5C	100	97.685	ENSMICG00000041608	RAB5C	100	97.685	Microcebus_murinus
ENSSTOG00000006620	RAB5C	100	97.685	ENSMOCG00000018531	-	100	97.685	Microtus_ochrogaster
ENSSTOG00000006620	RAB5C	99	89.815	ENSMMOG00000020621	rab5c	98	89.815	Mola_mola
ENSSTOG00000006620	RAB5C	99	87.615	ENSMALG00000022348	-	99	87.615	Monopterus_albus
ENSSTOG00000006620	RAB5C	97	84.834	ENSMALG00000006052	rab5c	96	84.651	Monopterus_albus
ENSSTOG00000006620	RAB5C	100	99.074	MGP_CAROLIEiJ_G0017184	Rab5c	100	99.074	Mus_caroli
ENSSTOG00000006620	RAB5C	100	99.074	ENSMUSG00000019173	Rab5c	100	99.074	Mus_musculus
ENSSTOG00000006620	RAB5C	100	99.074	MGP_PahariEiJ_G0018314	Rab5c	100	99.074	Mus_pahari
ENSSTOG00000006620	RAB5C	100	99.074	MGP_SPRETEiJ_G0018027	Rab5c	100	99.074	Mus_spretus
ENSSTOG00000006620	RAB5C	100	97.685	ENSMPUG00000010554	RAB5C	100	97.685	Mustela_putorius_furo
ENSSTOG00000006620	RAB5C	100	96.759	ENSNGAG00000010286	Rab5c	100	96.759	Nannospalax_galili
ENSSTOG00000006620	RAB5C	99	88.426	ENSNBRG00000018165	rab5c	98	90.741	Neolamprologus_brichardi
ENSSTOG00000006620	RAB5C	96	89.100	ENSNBRG00000016922	-	99	88.584	Neolamprologus_brichardi
ENSSTOG00000006620	RAB5C	82	92.697	ENSOPRG00000008255	RAB5C	100	92.697	Ochotona_princeps
ENSSTOG00000006620	RAB5C	100	96.296	ENSODEG00000017920	RAB5C	100	96.296	Octodon_degus
ENSSTOG00000006620	RAB5C	99	88.426	ENSONIG00000001113	rab5c	98	91.204	Oreochromis_niloticus
ENSSTOG00000006620	RAB5C	100	88.073	ENSORLG00000003882	rab5c	100	88.991	Oryzias_latipes
ENSSTOG00000006620	RAB5C	100	88.532	ENSORLG00020008388	rab5c	100	88.532	Oryzias_latipes_hni
ENSSTOG00000006620	RAB5C	100	88.073	ENSORLG00015021900	rab5c	100	88.991	Oryzias_latipes_hsok
ENSSTOG00000006620	RAB5C	100	88.073	ENSOMEG00000023078	rab5c	100	88.991	Oryzias_melastigma
ENSSTOG00000006620	RAB5C	100	97.685	ENSOGAG00000009456	RAB5C	100	97.685	Otolemur_garnettii
ENSSTOG00000006620	RAB5C	100	97.685	ENSOARG00000018768	RAB5C	100	97.685	Ovis_aries
ENSSTOG00000006620	RAB5C	100	97.685	ENSPPAG00000037206	RAB5C	100	97.685	Pan_paniscus
ENSSTOG00000006620	RAB5C	100	97.685	ENSPPRG00000005745	RAB5C	100	97.685	Panthera_pardus
ENSSTOG00000006620	RAB5C	100	97.685	ENSPTIG00000008177	RAB5C	100	97.685	Panthera_tigris_altaica
ENSSTOG00000006620	RAB5C	100	97.685	ENSPTRG00000009194	RAB5C	100	97.685	Pan_troglodytes
ENSSTOG00000006620	RAB5C	99	88.426	ENSPKIG00000020112	-	99	88.426	Paramormyrops_kingsleyae
ENSSTOG00000006620	RAB5C	99	88.837	ENSPKIG00000001237	-	99	88.837	Paramormyrops_kingsleyae
ENSSTOG00000006620	RAB5C	99	86.111	ENSPMGG00000010792	rab5c	97	89.573	Periophthalmus_magnuspinnatus
ENSSTOG00000006620	RAB5C	100	97.685	ENSPEMG00000017971	Rab5c	100	97.685	Peromyscus_maniculatus_bairdii
ENSSTOG00000006620	RAB5C	99	79.535	ENSPMAG00000001399	rab5c	100	79.535	Petromyzon_marinus
ENSSTOG00000006620	RAB5C	99	79.070	ENSPMAG00000007867	rab5c	100	79.070	Petromyzon_marinus
ENSSTOG00000006620	RAB5C	99	78.222	ENSPMAG00000000008	rab5c	100	78.222	Petromyzon_marinus
ENSSTOG00000006620	RAB5C	100	95.833	ENSPCIG00000020225	-	100	95.833	Phascolarctos_cinereus
ENSSTOG00000006620	RAB5C	99	89.352	ENSPLAG00000004790	rab5c	98	90.741	Poecilia_latipinna
ENSSTOG00000006620	RAB5C	99	89.862	ENSPLAG00000016333	-	99	89.862	Poecilia_latipinna
ENSSTOG00000006620	RAB5C	98	88.263	ENSPMEG00000012614	-	98	88.584	Poecilia_mexicana
ENSSTOG00000006620	RAB5C	99	89.352	ENSPMEG00000011336	rab5c	98	90.741	Poecilia_mexicana
ENSSTOG00000006620	RAB5C	87	92.593	ENSPREG00000022167	-	89	93.989	Poecilia_reticulata
ENSSTOG00000006620	RAB5C	99	89.352	ENSPREG00000010146	rab5c	98	90.741	Poecilia_reticulata
ENSSTOG00000006620	RAB5C	100	97.685	ENSPPYG00000008398	RAB5C	100	97.685	Pongo_abelii
ENSSTOG00000006620	RAB5C	100	96.759	ENSPCAG00000016412	RAB5C	100	96.759	Procavia_capensis
ENSSTOG00000006620	RAB5C	100	96.759	ENSPCOG00000026327	RAB5C	100	96.759	Propithecus_coquereli
ENSSTOG00000006620	RAB5C	100	98.148	ENSPVAG00000003867	RAB5C	100	98.148	Pteropus_vampyrus
ENSSTOG00000006620	RAB5C	96	89.100	ENSPNYG00000015851	-	99	88.584	Pundamilia_nyererei
ENSSTOG00000006620	RAB5C	99	87.500	ENSPNYG00000010615	rab5c	98	89.815	Pundamilia_nyererei
ENSSTOG00000006620	RAB5C	97	87.264	ENSPNAG00000002218	-	99	88.679	Pygocentrus_nattereri
ENSSTOG00000006620	RAB5C	99	90.323	ENSPNAG00000028138	rab5c	98	90.323	Pygocentrus_nattereri
ENSSTOG00000006620	RAB5C	100	98.611	ENSRNOG00000018568	Rab5c	100	98.611	Rattus_norvegicus
ENSSTOG00000006620	RAB5C	100	97.685	ENSRBIG00000031376	RAB5C	100	97.685	Rhinopithecus_bieti
ENSSTOG00000006620	RAB5C	100	97.685	ENSRROG00000032895	RAB5C	100	97.685	Rhinopithecus_roxellana
ENSSTOG00000006620	RAB5C	100	98.148	ENSSBOG00000032552	-	100	98.148	Saimiri_boliviensis_boliviensis
ENSSTOG00000006620	RAB5C	100	96.296	ENSSHAG00000005267	-	100	96.296	Sarcophilus_harrisii
ENSSTOG00000006620	RAB5C	99	86.636	ENSSFOG00015009988	-	99	86.636	Scleropages_formosus
ENSSTOG00000006620	RAB5C	96	91.346	ENSSMAG00000007323	rab5c	98	89.352	Scophthalmus_maximus
ENSSTOG00000006620	RAB5C	99	90.741	ENSSDUG00000023008	rab5c	98	90.741	Seriola_dumerili
ENSSTOG00000006620	RAB5C	99	90.278	ENSSLDG00000017771	rab5c	98	90.278	Seriola_lalandi_dorsalis
ENSSTOG00000006620	RAB5C	100	94.907	ENSSPUG00000012950	-	100	94.907	Sphenodon_punctatus
ENSSTOG00000006620	RAB5C	99	89.352	ENSSPAG00000006436	rab5c	98	91.667	Stegastes_partitus
ENSSTOG00000006620	RAB5C	100	97.685	ENSSSCG00000032467	RAB5C	100	97.685	Sus_scrofa
ENSSTOG00000006620	RAB5C	99	87.500	ENSTRUG00000015590	rab5c	98	89.352	Takifugu_rubripes
ENSSTOG00000006620	RAB5C	96	89.952	ENSTNIG00000011711	rab5c	95	89.952	Tetraodon_nigroviridis
ENSSTOG00000006620	RAB5C	100	97.685	ENSTBEG00000007092	RAB5C	100	97.685	Tupaia_belangeri
ENSSTOG00000006620	RAB5C	100	96.759	ENSTTRG00000006673	RAB5C	100	96.759	Tursiops_truncatus
ENSSTOG00000006620	RAB5C	100	97.685	ENSUAMG00000024343	RAB5C	100	97.685	Ursus_americanus
ENSSTOG00000006620	RAB5C	100	97.685	ENSUMAG00000023270	RAB5C	100	97.685	Ursus_maritimus
ENSSTOG00000006620	RAB5C	96	91.429	ENSXCOG00000006300	-	99	88.636	Xiphophorus_couchianus
ENSSTOG00000006620	RAB5C	99	88.889	ENSXCOG00000016788	rab5c	98	90.741	Xiphophorus_couchianus
ENSSTOG00000006620	RAB5C	99	89.352	ENSXMAG00000003266	rab5c	98	90.741	Xiphophorus_maculatus
ENSSTOG00000006620	RAB5C	99	90.323	ENSXMAG00000022179	-	99	90.323	Xiphophorus_maculatus