EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSTOG00000006812 (Gene tree)
Gene ID: 101958762
Gene Symbol: SMARCA2
Alias: BAF190|BRM|SNF2|SNF2L2|SNF2LA|SWI2|Sth1p|hBRM|hSNF2a
Full Name: SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 2
Gene Type: protein_coding
Species: Ictidomys_tridecemlineatus
Status: putative
Strand: Minus strand
Length: 165886 bases
Position: chrJH393313.1:2835496-3001381
Accession: 101958762
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSTOP00000025649	ResIII	PF04851.15	1.9e-08	1	1
ENSSTOP00000028694	ResIII	PF04851.15	1.9e-08	1	1
ENSSTOP00000029055	ResIII	PF04851.15	1.9e-08	1	1
ENSSTOP00000030030	ResIII	PF04851.15	1.9e-08	1	1
ENSSTOP00000031381	ResIII	PF04851.15	2e-08	1	1
ENSSTOP00000006128	ResIII	PF04851.15	2e-08	1	1
ENSSTOP00000031381	BRK	PF07533.16	2.2e-17	1	1
ENSSTOP00000025649	BRK	PF07533.16	2.2e-17	1	1
ENSSTOP00000006128	BRK	PF07533.16	2.2e-17	1	1
ENSSTOP00000028694	BRK	PF07533.16	2.2e-17	1	1
ENSSTOP00000029055	BRK	PF07533.16	2.2e-17	1	1
ENSSTOP00000030030	BRK	PF07533.16	2.2e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSTOT00000006855	SMARCA2-206	4779	XM_005324077	ENSSTOP00000006128	1592 (aa)	XP_005324134	I3M8N2
ENSSTOT00000037606	SMARCA2-207	4761	-	ENSSTOP00000031381	1586 (aa)	-	A0A287DD12
ENSSTOT00000039417	SMARCA2-208	4689	-	ENSSTOP00000025649	1562 (aa)	-	A0A287CWL0
ENSSTOT00000036922	SMARCA2-201	5858	XM_005324078	ENSSTOP00000028694	1574 (aa)	XP_005324135	A0A287D8Z6
ENSSTOT00000031739	SMARCA2-205	1963	XM_005324081	ENSSTOP00000027474	260 (aa)	XP_005324138	A0A287D1Q9
ENSSTOT00000034957	SMARCA2-209	204	-	ENSSTOP00000026481	68 (aa)	-	A0A287CYY5
ENSSTOT00000034371	SMARCA2-203	6046	-	ENSSTOP00000029055	1574 (aa)	-	A0A287D8Z6
ENSSTOT00000034460	SMARCA2-204	2243	XM_005324079	ENSSTOP00000027724	278 (aa)	XP_005324136	A0A287D2G2
ENSSTOT00000042283	SMARCA2-202	6246	-	ENSSTOP00000030030	1574 (aa)	-	A0A287D8Z6

Gene Model

Click here to download ENSSTOG00000006812's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSTOG00000006812's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSTOG00000006812	SMARCA2	82	82.217	ENSSTOG00000007939	SMARCA4	98	75.517

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSTOG00000006812	SMARCA2	100	98.116	ENSG00000080503	SMARCA2	100	99.329	Homo_sapiens
ENSSTOG00000006812	SMARCA2	100	80.528	ENSAPOG00000002641	SMARCA2	97	80.348	Acanthochromis_polyacanthus
ENSSTOG00000006812	SMARCA2	80	99.296	ENSAMEG00000012325	SMARCA2	100	99.296	Ailuropoda_melanoleuca
ENSSTOG00000006812	SMARCA2	100	79.612	ENSACIG00000015607	SMARCA2	97	79.640	Amphilophus_citrinellus
ENSSTOG00000006812	SMARCA2	100	80.225	ENSAOCG00000009647	-	97	80.116	Amphiprion_ocellaris
ENSSTOG00000006812	SMARCA2	100	80.402	ENSAPEG00000007646	SMARCA2	97	80.219	Amphiprion_percula
ENSSTOG00000006812	SMARCA2	99	81.182	ENSATEG00000006916	SMARCA2	96	80.986	Anabas_testudineus
ENSSTOG00000006812	SMARCA2	89	89.958	ENSAPLG00000013873	SMARCA2	94	88.727	Anas_platyrhynchos
ENSSTOG00000006812	SMARCA2	100	90.355	ENSACAG00000002423	SMARCA2	100	89.587	Anolis_carolinensis
ENSSTOG00000006812	SMARCA2	100	98.054	ENSANAG00000026498	SMARCA2	100	98.054	Aotus_nancymaae
ENSSTOG00000006812	SMARCA2	100	80.820	ENSACLG00000004248	SMARCA2	97	80.777	Astatotilapia_calliptera
ENSSTOG00000006812	SMARCA2	100	81.304	ENSAMXG00000012404	smarca2	97	82.307	Astyanax_mexicanus
ENSSTOG00000006812	SMARCA2	100	96.887	ENSBTAG00000007494	SMARCA2	100	96.887	Bos_taurus
ENSSTOG00000006812	SMARCA2	99	98.401	ENSCJAG00000010710	SMARCA2	99	98.362	Callithrix_jacchus
ENSSTOG00000006812	SMARCA2	100	97.141	ENSCAFG00000002013	SMARCA2	100	97.141	Canis_familiaris
ENSSTOG00000006812	SMARCA2	78	94.577	ENSCAFG00020026802	SMARCA2	98	94.577	Canis_lupus_dingo
ENSSTOG00000006812	SMARCA2	100	96.922	ENSCHIG00000025863	SMARCA2	100	96.922	Capra_hircus
ENSSTOG00000006812	SMARCA2	100	97.445	ENSTSYG00000003858	SMARCA2	100	97.445	Carlito_syrichta
ENSSTOG00000006812	SMARCA2	99	94.371	ENSCAPG00000002890	SMARCA2	100	94.371	Cavia_aperea
ENSSTOG00000006812	SMARCA2	100	97.586	ENSCPOG00000005475	SMARCA2	100	97.586	Cavia_porcellus
ENSSTOG00000006812	SMARCA2	100	98.159	ENSCCAG00000030636	SMARCA2	100	98.159	Cebus_capucinus
ENSSTOG00000006812	SMARCA2	100	97.652	ENSCATG00000031470	SMARCA2	100	97.652	Cercocebus_atys
ENSSTOG00000006812	SMARCA2	100	97.714	ENSCLAG00000014484	SMARCA2	100	97.714	Chinchilla_lanigera
ENSSTOG00000006812	SMARCA2	94	97.690	ENSCSAG00000008650	SMARCA2	99	97.690	Chlorocebus_sabaeus
ENSSTOG00000006812	SMARCA2	87	91.823	ENSCHOG00000004316	SMARCA2	87	91.823	Choloepus_hoffmanni
ENSSTOG00000006812	SMARCA2	100	91.041	ENSCPBG00000025463	SMARCA2	99	95.242	Chrysemys_picta_bellii
ENSSTOG00000006812	SMARCA2	100	97.990	ENSCANG00000039597	SMARCA2	100	97.990	Colobus_angolensis_palliatus
ENSSTOG00000006812	SMARCA2	100	90.201	ENSCGRG00001002323	Smarca2	100	90.333	Cricetulus_griseus_chok1gshd
ENSSTOG00000006812	SMARCA2	99	77.551	ENSCSEG00000019311	SMARCA2	97	77.597	Cynoglossus_semilaevis
ENSSTOG00000006812	SMARCA2	85	79.613	ENSCVAG00000016571	SMARCA2	77	85.238	Cyprinodon_variegatus
ENSSTOG00000006812	SMARCA2	100	81.414	ENSDARG00000008904	smarca2	97	81.924	Danio_rerio
ENSSTOG00000006812	SMARCA2	100	95.480	ENSDNOG00000006402	SMARCA2	100	95.480	Dasypus_novemcinctus
ENSSTOG00000006812	SMARCA2	100	97.552	ENSDORG00000014832	Smarca2	100	97.552	Dipodomys_ordii
ENSSTOG00000006812	SMARCA2	81	60.247	FBgn0000212	brm	73	61.241	Drosophila_melanogaster
ENSSTOG00000006812	SMARCA2	95	70.153	ENSEBUG00000011442	-	94	70.536	Eptatretus_burgeri
ENSSTOG00000006812	SMARCA2	87	61.775	ENSEBUG00000002449	-	89	68.491	Eptatretus_burgeri
ENSSTOG00000006812	SMARCA2	100	97.078	ENSEASG00005010312	SMARCA2	100	97.078	Equus_asinus_asinus
ENSSTOG00000006812	SMARCA2	67	100.000	ENSEEUG00000015540	-	69	100.000	Erinaceus_europaeus
ENSSTOG00000006812	SMARCA2	93	80.733	ENSELUG00000010318	smarca2	96	79.071	Esox_lucius
ENSSTOG00000006812	SMARCA2	100	96.633	ENSFCAG00000001568	SMARCA2	100	96.633	Felis_catus
ENSSTOG00000006812	SMARCA2	100	91.683	ENSFALG00000010416	SMARCA2	100	91.934	Ficedula_albicollis
ENSSTOG00000006812	SMARCA2	99	96.620	ENSFDAG00000010502	SMARCA2	99	96.556	Fukomys_damarensis
ENSSTOG00000006812	SMARCA2	100	80.561	ENSFHEG00000021250	SMARCA2	97	80.064	Fundulus_heteroclitus
ENSSTOG00000006812	SMARCA2	98	77.469	ENSGMOG00000014229	SMARCA2	97	77.763	Gadus_morhua
ENSSTOG00000006812	SMARCA2	100	92.381	ENSGALG00000010164	SMARCA2	100	91.556	Gallus_gallus
ENSSTOG00000006812	SMARCA2	95	76.826	ENSGAFG00000001164	SMARCA2	89	96.667	Gambusia_affinis
ENSSTOG00000006812	SMARCA2	99	79.117	ENSGACG00000014488	SMARCA2	97	78.645	Gasterosteus_aculeatus
ENSSTOG00000006812	SMARCA2	100	91.566	ENSGAGG00000024412	SMARCA2	100	91.683	Gopherus_agassizii
ENSSTOG00000006812	SMARCA2	100	93.028	ENSGGOG00000000513	SMARCA2	85	97.116	Gorilla_gorilla
ENSSTOG00000006812	SMARCA2	100	80.313	ENSHBUG00000006691	SMARCA2	96	80.742	Haplochromis_burtoni
ENSSTOG00000006812	SMARCA2	99	97.063	ENSHGLG00000005215	SMARCA2	99	97.063	Heterocephalus_glaber_female
ENSSTOG00000006812	SMARCA2	100	95.997	ENSHGLG00100010496	SMARCA2	100	95.997	Heterocephalus_glaber_male
ENSSTOG00000006812	SMARCA2	78	86.548	ENSHCOG00000015348	-	88	86.733	Hippocampus_comes
ENSSTOG00000006812	SMARCA2	100	81.110	ENSIPUG00000011060	smarca2	97	81.948	Ictalurus_punctatus
ENSSTOG00000006812	SMARCA2	100	97.524	ENSJJAG00000010867	Smarca2	100	97.524	Jaculus_jaculus
ENSSTOG00000006812	SMARCA2	100	80.298	ENSKMAG00000015844	-	98	79.987	Kryptolebias_marmoratus
ENSSTOG00000006812	SMARCA2	98	83.941	ENSLOCG00000011499	smarca2	97	83.666	Lepisosteus_oculatus
ENSSTOG00000006812	SMARCA2	100	95.009	ENSLAFG00000014061	SMARCA2	100	95.199	Loxodonta_africana
ENSSTOG00000006812	SMARCA2	100	96.482	ENSMFAG00000003814	SMARCA2	100	96.482	Macaca_fascicularis
ENSSTOG00000006812	SMARCA2	100	98.053	ENSMMUG00000015279	SMARCA2	100	98.053	Macaca_mulatta
ENSSTOG00000006812	SMARCA2	100	97.428	ENSMNEG00000041069	SMARCA2	100	97.428	Macaca_nemestrina
ENSSTOG00000006812	SMARCA2	100	95.415	ENSMLEG00000027418	SMARCA2	100	95.415	Mandrillus_leucophaeus
ENSSTOG00000006812	SMARCA2	100	81.281	ENSMAMG00000003056	SMARCA2	97	82.143	Mastacembelus_armatus
ENSSTOG00000006812	SMARCA2	100	80.528	ENSMZEG00005020709	SMARCA2	97	80.412	Maylandia_zebra
ENSSTOG00000006812	SMARCA2	77	77.822	ENSMGAG00000005160	-	100	76.760	Meleagris_gallopavo
ENSSTOG00000006812	SMARCA2	100	97.613	ENSMICG00000005162	SMARCA2	100	97.613	Microcebus_murinus
ENSSTOG00000006812	SMARCA2	100	97.081	ENSMOCG00000001611	Smarca2	100	97.081	Microtus_ochrogaster
ENSSTOG00000006812	SMARCA2	99	79.052	ENSMMOG00000014196	SMARCA2	97	79.061	Mola_mola
ENSSTOG00000006812	SMARCA2	100	92.346	ENSMODG00000003578	SMARCA2	100	92.159	Monodelphis_domestica
ENSSTOG00000006812	SMARCA2	99	80.974	ENSMALG00000009611	SMARCA2	97	80.679	Monopterus_albus
ENSSTOG00000006812	SMARCA2	100	96.941	MGP_CAROLIEiJ_G0022841	Smarca2	100	96.941	Mus_caroli
ENSSTOG00000006812	SMARCA2	100	96.841	ENSMUSG00000024921	Smarca2	99	99.441	Mus_musculus
ENSSTOG00000006812	SMARCA2	100	97.150	MGP_PahariEiJ_G0014334	Smarca2	100	97.150	Mus_pahari
ENSSTOG00000006812	SMARCA2	100	96.654	MGP_SPRETEiJ_G0023759	Smarca2	99	97.769	Mus_spretus
ENSSTOG00000006812	SMARCA2	80	99.063	ENSMPUG00000005171	SMARCA2	94	99.063	Mustela_putorius_furo
ENSSTOG00000006812	SMARCA2	99	91.263	ENSMLUG00000002342	SMARCA2	83	93.926	Myotis_lucifugus
ENSSTOG00000006812	SMARCA2	99	96.528	ENSNGAG00000000108	Smarca2	99	96.528	Nannospalax_galili
ENSSTOG00000006812	SMARCA2	95	68.029	ENSNBRG00000017998	SMARCA2	94	83.085	Neolamprologus_brichardi
ENSSTOG00000006812	SMARCA2	100	94.790	ENSNLEG00000008575	SMARCA2	100	94.790	Nomascus_leucogenys
ENSSTOG00000006812	SMARCA2	100	85.741	ENSMEUG00000009812	SMARCA2	100	85.553	Notamacropus_eugenii
ENSSTOG00000006812	SMARCA2	100	91.134	ENSOPRG00000013474	SMARCA2	100	91.260	Ochotona_princeps
ENSSTOG00000006812	SMARCA2	99	97.194	ENSODEG00000005452	SMARCA2	99	97.194	Octodon_degus
ENSSTOG00000006812	SMARCA2	99	80.643	ENSONIG00000014163	SMARCA2	97	80.616	Oreochromis_niloticus
ENSSTOG00000006812	SMARCA2	50	94.480	ENSOANG00000008299	-	95	98.248	Ornithorhynchus_anatinus
ENSSTOG00000006812	SMARCA2	100	97.025	ENSOCUG00000006320	SMARCA2	100	97.025	Oryctolagus_cuniculus
ENSSTOG00000006812	SMARCA2	100	79.874	ENSORLG00000020820	SMARCA2	97	79.677	Oryzias_latipes
ENSSTOG00000006812	SMARCA2	100	79.699	ENSORLG00015006289	SMARCA2	97	79.793	Oryzias_latipes_hsok
ENSSTOG00000006812	SMARCA2	99	80.627	ENSOMEG00000009736	-	97	79.357	Oryzias_melastigma
ENSSTOG00000006812	SMARCA2	99	93.404	ENSOGAG00000017053	SMARCA2	99	93.953	Otolemur_garnettii
ENSSTOG00000006812	SMARCA2	100	95.431	ENSOARG00000013265	SMARCA2	100	95.368	Ovis_aries
ENSSTOG00000006812	SMARCA2	100	93.593	ENSPPAG00000038717	SMARCA2	100	94.309	Pan_paniscus
ENSSTOG00000006812	SMARCA2	100	96.696	ENSPPRG00000001879	SMARCA2	100	96.696	Panthera_pardus
ENSSTOG00000006812	SMARCA2	100	96.422	ENSPTRG00000051168	SMARCA2	100	96.422	Pan_troglodytes
ENSSTOG00000006812	SMARCA2	100	90.602	ENSPANG00000025121	SMARCA2	100	90.915	Papio_anubis
ENSSTOG00000006812	SMARCA2	100	82.868	ENSPKIG00000018469	-	97	82.380	Paramormyrops_kingsleyae
ENSSTOG00000006812	SMARCA2	100	89.448	ENSPSIG00000006284	SMARCA2	100	90.863	Pelodiscus_sinensis
ENSSTOG00000006812	SMARCA2	99	74.161	ENSPMGG00000013696	-	97	74.357	Periophthalmus_magnuspinnatus
ENSSTOG00000006812	SMARCA2	100	96.798	ENSPEMG00000019821	Smarca2	100	96.798	Peromyscus_maniculatus_bairdii
ENSSTOG00000006812	SMARCA2	95	72.674	ENSPMAG00000005337	-	94	72.307	Petromyzon_marinus
ENSSTOG00000006812	SMARCA2	100	93.901	ENSPCIG00000015658	SMARCA2	100	93.710	Phascolarctos_cinereus
ENSSTOG00000006812	SMARCA2	100	79.925	ENSPFOG00000001856	SMARCA2	97	79.757	Poecilia_formosa
ENSSTOG00000006812	SMARCA2	99	80.403	ENSPLAG00000017829	SMARCA2	80	83.663	Poecilia_latipinna
ENSSTOG00000006812	SMARCA2	99	80.391	ENSPMEG00000001815	-	97	77.112	Poecilia_mexicana
ENSSTOG00000006812	SMARCA2	100	80.186	ENSPREG00000013800	SMARCA2	96	77.677	Poecilia_reticulata
ENSSTOG00000006812	SMARCA2	100	97.395	ENSPPYG00000019258	SMARCA2	100	97.395	Pongo_abelii
ENSSTOG00000006812	SMARCA2	76	85.523	ENSPCAG00000016969	SMARCA2	78	86.115	Procavia_capensis
ENSSTOG00000006812	SMARCA2	100	95.857	ENSPCOG00000025709	SMARCA2	100	95.857	Propithecus_coquereli
ENSSTOG00000006812	SMARCA2	91	98.421	ENSPVAG00000000901	SMARCA2	95	98.421	Pteropus_vampyrus
ENSSTOG00000006812	SMARCA2	100	77.073	ENSPNYG00000004533	SMARCA2	97	76.611	Pundamilia_nyererei
ENSSTOG00000006812	SMARCA2	99	82.634	ENSPNAG00000014635	smarca2	96	82.750	Pygocentrus_nattereri
ENSSTOG00000006812	SMARCA2	100	96.869	ENSRNOG00000011931	Smarca2	100	96.869	Rattus_norvegicus
ENSSTOG00000006812	SMARCA2	100	95.680	ENSRBIG00000038618	SMARCA2	100	95.680	Rhinopithecus_bieti
ENSSTOG00000006812	SMARCA2	100	96.796	ENSRROG00000019271	SMARCA2	100	96.796	Rhinopithecus_roxellana
ENSSTOG00000006812	SMARCA2	100	93.308	ENSSBOG00000034827	SMARCA2	100	93.719	Saimiri_boliviensis_boliviensis
ENSSTOG00000006812	SMARCA2	100	91.848	ENSSHAG00000007884	SMARCA2	100	92.035	Sarcophilus_harrisii
ENSSTOG00000006812	SMARCA2	91	83.799	ENSSFOG00015014870	SMARCA2	94	85.463	Scleropages_formosus
ENSSTOG00000006812	SMARCA2	100	80.326	ENSSMAG00000013707	SMARCA2	97	80.398	Scophthalmus_maximus
ENSSTOG00000006812	SMARCA2	100	80.318	ENSSDUG00000008852	-	98	80.451	Seriola_dumerili
ENSSTOG00000006812	SMARCA2	99	81.095	ENSSLDG00000025449	SMARCA2	97	80.518	Seriola_lalandi_dorsalis
ENSSTOG00000006812	SMARCA2	95	97.895	ENSSARG00000007888	SMARCA2	95	97.895	Sorex_araneus
ENSSTOG00000006812	SMARCA2	98	85.696	ENSSPUG00000001629	SMARCA2	98	85.845	Sphenodon_punctatus
ENSSTOG00000006812	SMARCA2	100	80.451	ENSSPAG00000020091	-	97	80.141	Stegastes_partitus
ENSSTOG00000006812	SMARCA2	100	96.734	ENSSSCG00000005232	SMARCA2	100	96.734	Sus_scrofa
ENSSTOG00000006812	SMARCA2	98	91.482	ENSTGUG00000005460	SMARCA2	98	91.016	Taeniopygia_guttata
ENSSTOG00000006812	SMARCA2	99	79.987	ENSTRUG00000015619	SMARCA2	97	79.767	Takifugu_rubripes
ENSSTOG00000006812	SMARCA2	67	100.000	ENSTBEG00000008767	SMARCA2	74	100.000	Tupaia_belangeri
ENSSTOG00000006812	SMARCA2	100	93.405	ENSTTRG00000002033	SMARCA2	100	93.405	Tursiops_truncatus
ENSSTOG00000006812	SMARCA2	89	94.575	ENSUAMG00000024701	SMARCA2	99	94.579	Ursus_americanus
ENSSTOG00000006812	SMARCA2	92	87.586	ENSVPAG00000001204	SMARCA2	100	87.586	Vicugna_pacos
ENSSTOG00000006812	SMARCA2	77	95.580	ENSVVUG00000004598	SMARCA2	99	95.580	Vulpes_vulpes
ENSSTOG00000006812	SMARCA2	100	83.478	ENSXETG00000015299	smarca2	81	88.249	Xenopus_tropicalis
ENSSTOG00000006812	SMARCA2	90	79.225	ENSXCOG00000011073	SMARCA2	97	80.029	Xiphophorus_couchianus
ENSSTOG00000006812	SMARCA2	100	79.727	ENSXMAG00000015611	SMARCA2	96	78.964	Xiphophorus_maculatus