EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSTOG00000007125 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ictidomys_tridecemlineatus
Status: putative
Strand: Minus strand
Length: 1884 bases
Position: chrJH393302.1:2450591-2452474
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSTOP00000006364	APOBEC_N	PF08210.11	1e-43	1	1
ENSSTOP00000006364	APOBEC_C	PF05240.14	2.1e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSTOT00000007122	-	1066	-	ENSSTOP00000006364	208 (aa)	-	I3M955

Gene Model

Click here to download ENSSTOG00000007125's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSTOG00000007125's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSTOG00000007125	-	85	35.912	ENSSTOG00000010972	AICDA	89	35.912

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSTOG00000007125	-	85	51.111	ENSG00000100298	APOBEC3H	99	51.111	Homo_sapiens
ENSSTOG00000007125	-	86	56.522	ENSAMEG00000010818	-	78	56.522	Ailuropoda_melanoleuca
ENSSTOG00000007125	-	85	53.261	ENSANAG00000025410	APOBEC3H	82	53.261	Aotus_nancymaae
ENSSTOG00000007125	-	87	52.514	ENSBTAG00000007755	APOBEC3H	94	52.514	Bos_taurus
ENSSTOG00000007125	-	85	53.889	ENSCJAG00000012524	APOBEC3H	91	54.286	Callithrix_jacchus
ENSSTOG00000007125	-	86	51.397	ENSCAFG00000001361	APOBEC3Z3	92	51.397	Canis_familiaris
ENSSTOG00000007125	-	87	49.724	ENSCAFG00020002584	-	93	49.724	Canis_lupus_dingo
ENSSTOG00000007125	-	87	50.829	ENSCHIG00000026580	-	96	50.829	Capra_hircus
ENSSTOG00000007125	-	84	51.429	ENSTSYG00000032894	-	100	51.429	Carlito_syrichta
ENSSTOG00000007125	-	91	53.927	ENSCPOG00000009257	-	82	53.927	Cavia_porcellus
ENSSTOG00000007125	-	85	51.366	ENSCCAG00000008525	APOBEC3H	90	53.191	Cebus_capucinus
ENSSTOG00000007125	-	85	51.667	ENSCATG00000030302	APOBEC3H	99	51.667	Cercocebus_atys
ENSSTOG00000007125	-	84	54.545	ENSCLAG00000016615	-	87	54.545	Chinchilla_lanigera
ENSSTOG00000007125	-	91	50.725	ENSCSAG00000006371	APOBEC3H	98	50.725	Chlorocebus_sabaeus
ENSSTOG00000007125	-	88	52.198	ENSCGRG00001022976	Apobec3	87	52.198	Cricetulus_griseus_chok1gshd
ENSSTOG00000007125	-	88	52.198	ENSCGRG00000005621	Apobec3	87	52.198	Cricetulus_griseus_crigri
ENSSTOG00000007125	-	86	52.717	ENSDORG00000027271	-	92	52.717	Dipodomys_ordii
ENSSTOG00000007125	-	77	43.373	ENSEASG00005009166	-	57	40.816	Equus_asinus_asinus
ENSSTOG00000007125	-	94	47.449	ENSECAG00000007726	APOBEC3H	76	49.718	Equus_caballus
ENSSTOG00000007125	-	88	51.892	ENSFCAG00000005251	APOBEC3Z3	94	51.892	Felis_catus
ENSSTOG00000007125	-	75	56.934	ENSJJAG00000016840	-	78	56.934	Jaculus_jaculus
ENSSTOG00000007125	-	86	46.023	ENSLAFG00000027404	-	95	46.023	Loxodonta_africana
ENSSTOG00000007125	-	85	53.333	ENSMFAG00000031827	APOBEC3H	90	55.072	Macaca_fascicularis
ENSSTOG00000007125	-	85	53.333	ENSMMUG00000001016	APOBEC3H	91	54.286	Macaca_mulatta
ENSSTOG00000007125	-	85	53.333	ENSMNEG00000039259	APOBEC3H	91	54.286	Macaca_nemestrina
ENSSTOG00000007125	-	85	52.222	ENSMLEG00000033417	APOBEC3H	90	54.348	Mandrillus_leucophaeus
ENSSTOG00000007125	-	91	49.500	ENSMAUG00000011683	Apobec3	87	49.500	Mesocricetus_auratus
ENSSTOG00000007125	-	97	55.618	ENSMOCG00000021576	Apobec3	92	55.191	Microtus_ochrogaster
ENSSTOG00000007125	-	86	46.328	MGP_CAROLIEiJ_G0020029	Apobec3	92	46.524	Mus_caroli
ENSSTOG00000007125	-	86	47.399	ENSMUSG00000009585	Apobec3	100	44.340	Mus_musculus
ENSSTOG00000007125	-	97	48.634	MGP_PahariEiJ_G0020031	-	91	46.842	Mus_pahari
ENSSTOG00000007125	-	85	47.283	MGP_SPRETEiJ_G0020927	Apobec3	89	47.283	Mus_spretus
ENSSTOG00000007125	-	87	57.865	ENSMPUG00000013239	-	87	57.865	Mustela_putorius_furo
ENSSTOG00000007125	-	89	50.286	ENSNGAG00000018998	Apobec3	92	50.286	Nannospalax_galili
ENSSTOG00000007125	-	85	52.222	ENSNLEG00000015218	-	85	52.222	Nomascus_leucogenys
ENSSTOG00000007125	-	87	40.223	ENSOCUG00000023913	-	83	40.223	Oryctolagus_cuniculus
ENSSTOG00000007125	-	87	51.955	ENSOARG00000016290	APOBEC3F	96	51.955	Ovis_aries
ENSSTOG00000007125	-	85	51.667	ENSPPAG00000036522	APOBEC3H	98	51.667	Pan_paniscus
ENSSTOG00000007125	-	88	53.226	ENSPPRG00000003941	-	94	53.226	Panthera_pardus
ENSSTOG00000007125	-	72	40.764	ENSPPRG00000003675	-	81	40.764	Panthera_pardus
ENSSTOG00000007125	-	88	53.226	ENSPTIG00000010283	-	94	53.226	Panthera_tigris_altaica
ENSSTOG00000007125	-	85	51.667	ENSPTRG00000014390	APOBEC3H	98	51.667	Pan_troglodytes
ENSSTOG00000007125	-	91	49.029	ENSPANG00000010774	APOBEC3H	98	49.029	Papio_anubis
ENSSTOG00000007125	-	86	49.198	ENSPEMG00000000456	Apobec3	84	49.457	Peromyscus_maniculatus_bairdii
ENSSTOG00000007125	-	85	53.889	ENSPPYG00000011834	-	85	53.889	Pongo_abelii
ENSSTOG00000007125	-	85	44.318	ENSPCAG00000015655	-	98	44.318	Procavia_capensis
ENSSTOG00000007125	-	61	40.476	ENSPVAG00000024161	-	94	40.476	Pteropus_vampyrus
ENSSTOG00000007125	-	64	36.090	ENSPVAG00000024267	-	99	36.090	Pteropus_vampyrus
ENSSTOG00000007125	-	85	53.409	ENSPVAG00000009462	-	99	53.409	Pteropus_vampyrus
ENSSTOG00000007125	-	85	49.727	ENSRNOG00000016852	Apobec3	85	49.727	Rattus_norvegicus
ENSSTOG00000007125	-	85	54.444	ENSRBIG00000029088	APOBEC3H	91	57.143	Rhinopithecus_bieti
ENSSTOG00000007125	-	85	55.000	ENSRROG00000024699	APOBEC3H	91	57.143	Rhinopithecus_roxellana
ENSSTOG00000007125	-	90	50.777	ENSSBOG00000030005	APOBEC3H	99	52.198	Saimiri_boliviensis_boliviensis
ENSSTOG00000007125	-	87	51.955	ENSSSCG00000000091	APOBEC3B	84	51.955	Sus_scrofa
ENSSTOG00000007125	-	82	55.882	ENSTBEG00000001532	-	99	55.882	Tupaia_belangeri
ENSSTOG00000007125	-	86	53.333	ENSTTRG00000001266	-	100	53.333	Tursiops_truncatus
ENSSTOG00000007125	-	86	54.839	ENSUAMG00000004427	-	83	54.839	Ursus_americanus
ENSSTOG00000007125	-	86	56.983	ENSUMAG00000014435	-	91	56.983	Ursus_maritimus
ENSSTOG00000007125	-	62	51.163	ENSVPAG00000011108	-	99	51.163	Vicugna_pacos