EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSTOG00000007519 (Gene tree)
Gene ID: 101960281
Gene Symbol: PARN
Alias: DAN
Full Name: poly(A)-specific ribonuclease
Gene Type: protein_coding
Species: Ictidomys_tridecemlineatus
Status: putative
Strand: Minus strand
Length: 143615 bases
Position: chrJH393311.1:2666874-2810488
Accession: 101960281
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSTOP00000006730	R3H	PF01424.22	3.9e-05	1	1
ENSSTOP00000006730	RNA_bind	PF08675.11	8.3e-33	1	1
ENSSTOP00000006730	CAF1	PF04857.20	8.6e-90	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSTOT00000007530	PARN-201	3312	XM_013357899	ENSSTOP00000006730	634 (aa)	XP_013213353	I3M9X4

Gene Model

Click here to download ENSSTOG00000007519's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSTOG00000007519's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSTOG00000007519	PARN	100	91.549	ENSG00000140694	PARN	100	96.610	Homo_sapiens
ENSSTOG00000007519	PARN	100	91.080	ENSAMEG00000011208	PARN	100	91.080	Ailuropoda_melanoleuca
ENSSTOG00000007519	PARN	91	68.404	ENSACIG00000000619	parn	96	68.404	Amphilophus_citrinellus
ENSSTOG00000007519	PARN	91	73.137	ENSAOCG00000003465	parn	82	73.137	Amphiprion_ocellaris
ENSSTOG00000007519	PARN	79	73.360	ENSAPEG00000010661	parn	96	73.360	Amphiprion_percula
ENSSTOG00000007519	PARN	95	70.484	ENSATEG00000004661	parn	88	70.484	Anabas_testudineus
ENSSTOG00000007519	PARN	99	82.437	ENSAPLG00000013914	PARN	99	82.437	Anas_platyrhynchos
ENSSTOG00000007519	PARN	100	77.231	ENSACAG00000004973	PARN	100	78.714	Anolis_carolinensis
ENSSTOG00000007519	PARN	100	90.610	ENSANAG00000031516	PARN	100	96.610	Aotus_nancymaae
ENSSTOG00000007519	PARN	91	73.529	ENSACLG00000004742	parn	83	73.748	Astatotilapia_calliptera
ENSSTOG00000007519	PARN	87	75.410	ENSAMXG00000012390	parn	92	71.503	Astyanax_mexicanus
ENSSTOG00000007519	PARN	100	89.028	ENSBTAG00000018097	PARN	100	91.334	Bos_taurus
ENSSTOG00000007519	PARN	100	90.923	ENSCJAG00000015866	PARN	100	96.610	Callithrix_jacchus
ENSSTOG00000007519	PARN	100	91.536	ENSCAFG00000018795	PARN	100	91.536	Canis_familiaris
ENSSTOG00000007519	PARN	100	91.536	ENSCAFG00020024126	PARN	100	91.536	Canis_lupus_dingo
ENSSTOG00000007519	PARN	100	92.006	ENSCHIG00000018143	PARN	100	92.006	Capra_hircus
ENSSTOG00000007519	PARN	74	61.954	ENSCAPG00000007984	PARN	78	61.954	Cavia_aperea
ENSSTOG00000007519	PARN	100	90.267	ENSCPOG00000002263	PARN	100	90.267	Cavia_porcellus
ENSSTOG00000007519	PARN	100	91.236	ENSCCAG00000030367	PARN	100	96.610	Cebus_capucinus
ENSSTOG00000007519	PARN	100	83.465	ENSCATG00000041368	PARN	100	96.610	Cercocebus_atys
ENSSTOG00000007519	PARN	52	35.172	ENSCATG00000033196	PNLDC1	70	35.172	Cercocebus_atys
ENSSTOG00000007519	PARN	100	91.052	ENSCLAG00000015406	PARN	99	91.052	Chinchilla_lanigera
ENSSTOG00000007519	PARN	100	91.862	ENSCSAG00000008142	PARN	100	91.862	Chlorocebus_sabaeus
ENSSTOG00000007519	PARN	99	73.851	ENSCHOG00000007014	PARN	100	73.851	Choloepus_hoffmanni
ENSSTOG00000007519	PARN	85	84.743	ENSCPBG00000006609	PARN	94	85.192	Chrysemys_picta_bellii
ENSSTOG00000007519	PARN	81	44.090	ENSCING00000010142	-	99	44.090	Ciona_intestinalis
ENSSTOG00000007519	PARN	100	79.483	ENSCANG00000028849	-	100	96.610	Colobus_angolensis_palliatus
ENSSTOG00000007519	PARN	100	85.915	ENSCGRG00001012096	Parn	100	85.915	Cricetulus_griseus_chok1gshd
ENSSTOG00000007519	PARN	100	85.915	ENSCGRG00000004939	Parn	100	85.915	Cricetulus_griseus_crigri
ENSSTOG00000007519	PARN	95	69.771	ENSCSEG00000002064	parn	100	63.801	Cynoglossus_semilaevis
ENSSTOG00000007519	PARN	91	72.821	ENSCVAG00000014848	parn	83	72.821	Cyprinodon_variegatus
ENSSTOG00000007519	PARN	100	63.182	ENSDARG00000102634	parn	100	62.879	Danio_rerio
ENSSTOG00000007519	PARN	100	91.379	ENSDNOG00000000833	PARN	98	93.705	Dasypus_novemcinctus
ENSSTOG00000007519	PARN	73	91.255	ENSETEG00000014828	-	69	91.255	Echinops_telfairi
ENSSTOG00000007519	PARN	100	91.536	ENSEASG00005011400	PARN	100	91.536	Equus_asinus_asinus
ENSSTOG00000007519	PARN	100	91.223	ENSECAG00000017792	PARN	100	91.223	Equus_caballus
ENSSTOG00000007519	PARN	86	82.805	ENSEEUG00000010370	PARN	86	82.805	Erinaceus_europaeus
ENSSTOG00000007519	PARN	84	76.075	ENSELUG00000013139	parn	71	76.075	Esox_lucius
ENSSTOG00000007519	PARN	100	92.790	ENSFCAG00000044961	PARN	100	100.000	Felis_catus
ENSSTOG00000007519	PARN	58	31.053	ENSFALG00000012081	PNLDC1	70	31.053	Ficedula_albicollis
ENSSTOG00000007519	PARN	99	81.775	ENSFALG00000003911	PARN	98	81.775	Ficedula_albicollis
ENSSTOG00000007519	PARN	100	90.424	ENSFDAG00000009234	PARN	100	90.424	Fukomys_damarensis
ENSSTOG00000007519	PARN	92	66.110	ENSFHEG00000013738	parn	92	76.271	Fundulus_heteroclitus
ENSSTOG00000007519	PARN	84	75.373	ENSGMOG00000003231	parn	97	75.373	Gadus_morhua
ENSSTOG00000007519	PARN	100	81.790	ENSGALG00000003091	PARN	100	81.790	Gallus_gallus
ENSSTOG00000007519	PARN	91	72.619	ENSGAFG00000011061	parn	84	72.074	Gambusia_affinis
ENSSTOG00000007519	PARN	100	67.752	ENSGACG00000019501	parn	100	68.062	Gasterosteus_aculeatus
ENSSTOG00000007519	PARN	51	77.914	ENSGAGG00000023281	PARN	83	77.914	Gopherus_agassizii
ENSSTOG00000007519	PARN	97	91.948	ENSGGOG00000025224	PARN	100	96.610	Gorilla_gorilla
ENSSTOG00000007519	PARN	91	73.702	ENSHBUG00000017906	parn	92	74.094	Haplochromis_burtoni
ENSSTOG00000007519	PARN	100	90.267	ENSHGLG00000010886	PARN	100	90.267	Heterocephalus_glaber_female
ENSSTOG00000007519	PARN	100	90.267	ENSHGLG00100014659	PARN	100	90.267	Heterocephalus_glaber_male
ENSSTOG00000007519	PARN	88	69.858	ENSHCOG00000008683	parn	97	69.858	Hippocampus_comes
ENSSTOG00000007519	PARN	100	58.360	ENSIPUG00000012401	parn	86	61.921	Ictalurus_punctatus
ENSSTOG00000007519	PARN	100	88.401	ENSJJAG00000023049	Parn	100	88.401	Jaculus_jaculus
ENSSTOG00000007519	PARN	91	73.621	ENSKMAG00000009462	parn	83	73.621	Kryptolebias_marmoratus
ENSSTOG00000007519	PARN	92	71.404	ENSLBEG00000009167	parn	90	71.525	Labrus_bergylta
ENSSTOG00000007519	PARN	79	77.976	ENSLACG00000004207	PARN	100	76.651	Latimeria_chalumnae
ENSSTOG00000007519	PARN	90	75.521	ENSLOCG00000000715	parn	82	75.306	Lepisosteus_oculatus
ENSSTOG00000007519	PARN	100	90.125	ENSLAFG00000015036	PARN	100	90.125	Loxodonta_africana
ENSSTOG00000007519	PARN	100	86.760	ENSMFAG00000044852	PARN	100	96.610	Macaca_fascicularis
ENSSTOG00000007519	PARN	100	91.549	ENSMMUG00000018849	PARN	100	96.610	Macaca_mulatta
ENSSTOG00000007519	PARN	100	91.706	ENSMNEG00000045108	PARN	100	96.610	Macaca_nemestrina
ENSSTOG00000007519	PARN	100	91.549	ENSMLEG00000031743	PARN	100	96.610	Mandrillus_leucophaeus
ENSSTOG00000007519	PARN	92	72.014	ENSMAMG00000006939	parn	83	72.014	Mastacembelus_armatus
ENSSTOG00000007519	PARN	91	73.702	ENSMZEG00005013590	parn	95	72.105	Maylandia_zebra
ENSSTOG00000007519	PARN	95	81.713	ENSMGAG00000001004	PARN	95	81.713	Meleagris_gallopavo
ENSSTOG00000007519	PARN	100	80.062	ENSMAUG00000008025	Parn	100	80.062	Mesocricetus_auratus
ENSSTOG00000007519	PARN	100	92.476	ENSMICG00000016053	PARN	100	98.305	Microcebus_murinus
ENSSTOG00000007519	PARN	78	90.283	ENSMOCG00000022211	Parn	100	90.283	Microtus_ochrogaster
ENSSTOG00000007519	PARN	84	75.327	ENSMMOG00000011333	parn	87	75.327	Mola_mola
ENSSTOG00000007519	PARN	78	93.145	ENSMODG00000004915	PARN	99	93.145	Monodelphis_domestica
ENSSTOG00000007519	PARN	84	77.467	ENSMALG00000019426	parn	91	77.467	Monopterus_albus
ENSSTOG00000007519	PARN	100	85.893	MGP_CAROLIEiJ_G0020466	Parn	100	85.893	Mus_caroli
ENSSTOG00000007519	PARN	100	85.893	ENSMUSG00000022685	Parn	100	92.683	Mus_musculus
ENSSTOG00000007519	PARN	51	30.422	ENSMUSG00000073460	Pnldc1	97	30.422	Mus_musculus
ENSSTOG00000007519	PARN	100	86.050	MGP_PahariEiJ_G0016172	Parn	100	86.050	Mus_pahari
ENSSTOG00000007519	PARN	100	85.737	MGP_SPRETEiJ_G0021361	Parn	100	85.737	Mus_spretus
ENSSTOG00000007519	PARN	100	91.379	ENSMPUG00000014464	PARN	100	91.379	Mustela_putorius_furo
ENSSTOG00000007519	PARN	78	92.713	ENSMLUG00000005414	PARN	100	92.713	Myotis_lucifugus
ENSSTOG00000007519	PARN	91	70.934	ENSNBRG00000006805	parn	98	70.934	Neolamprologus_brichardi
ENSSTOG00000007519	PARN	100	91.549	ENSNLEG00000010241	PARN	100	96.610	Nomascus_leucogenys
ENSSTOG00000007519	PARN	99	61.490	ENSMEUG00000008178	-	100	61.490	Notamacropus_eugenii
ENSSTOG00000007519	PARN	99	85.420	ENSOPRG00000012187	PARN	100	85.420	Ochotona_princeps
ENSSTOG00000007519	PARN	100	82.344	ENSODEG00000001617	PARN	100	82.344	Octodon_degus
ENSSTOG00000007519	PARN	100	68.550	ENSONIG00000000151	parn	100	68.550	Oreochromis_niloticus
ENSSTOG00000007519	PARN	59	80.789	ENSOANG00000020155	-	97	80.789	Ornithorhynchus_anatinus
ENSSTOG00000007519	PARN	99	90.079	ENSOCUG00000000322	PARN	100	90.079	Oryctolagus_cuniculus
ENSSTOG00000007519	PARN	91	73.448	ENSORLG00020010313	parn	84	73.448	Oryzias_latipes_hni
ENSSTOG00000007519	PARN	91	72.759	ENSORLG00015000300	parn	84	72.759	Oryzias_latipes_hsok
ENSSTOG00000007519	PARN	91	72.759	ENSOMEG00000019555	parn	97	66.516	Oryzias_melastigma
ENSSTOG00000007519	PARN	78	92.929	ENSOGAG00000014626	PARN	100	92.929	Otolemur_garnettii
ENSSTOG00000007519	PARN	78	96.154	ENSOARG00000007574	PARN	100	96.154	Ovis_aries
ENSSTOG00000007519	PARN	100	91.236	ENSPPAG00000031438	PARN	100	96.610	Pan_paniscus
ENSSTOG00000007519	PARN	100	92.633	ENSPPRG00000018583	PARN	100	100.000	Panthera_pardus
ENSSTOG00000007519	PARN	100	92.633	ENSPTIG00000012135	PARN	100	100.000	Panthera_tigris_altaica
ENSSTOG00000007519	PARN	100	91.236	ENSPTRG00000007792	PARN	100	96.610	Pan_troglodytes
ENSSTOG00000007519	PARN	100	88.732	ENSPANG00000020099	PARN	100	96.610	Papio_anubis
ENSSTOG00000007519	PARN	90	74.081	ENSPKIG00000022807	parn	91	69.113	Paramormyrops_kingsleyae
ENSSTOG00000007519	PARN	97	82.958	ENSPSIG00000014804	PARN	100	81.456	Pelodiscus_sinensis
ENSSTOG00000007519	PARN	81	75.486	ENSPMGG00000014431	parn	74	73.978	Periophthalmus_magnuspinnatus
ENSSTOG00000007519	PARN	100	83.229	ENSPEMG00000018439	Parn	100	83.229	Peromyscus_maniculatus_bairdii
ENSSTOG00000007519	PARN	82	67.946	ENSPMAG00000003956	parn	99	67.946	Petromyzon_marinus
ENSSTOG00000007519	PARN	67	85.816	ENSPCIG00000001259	PARN	91	91.525	Phascolarctos_cinereus
ENSSTOG00000007519	PARN	91	72.526	ENSPFOG00000012823	parn	83	72.526	Poecilia_formosa
ENSSTOG00000007519	PARN	91	72.696	ENSPLAG00000006395	parn	83	72.696	Poecilia_latipinna
ENSSTOG00000007519	PARN	91	72.696	ENSPMEG00000007711	parn	84	71.980	Poecilia_mexicana
ENSSTOG00000007519	PARN	91	72.355	ENSPREG00000000147	parn	84	71.644	Poecilia_reticulata
ENSSTOG00000007519	PARN	100	90.796	ENSPPYG00000007123	PARN	100	90.796	Pongo_abelii
ENSSTOG00000007519	PARN	95	80.000	ENSPCAG00000001741	PARN	100	80.165	Procavia_capensis
ENSSTOG00000007519	PARN	100	89.655	ENSPCOG00000019292	PARN	100	98.305	Propithecus_coquereli
ENSSTOG00000007519	PARN	99	86.846	ENSPVAG00000002547	PARN	100	86.846	Pteropus_vampyrus
ENSSTOG00000007519	PARN	100	64.646	ENSPNYG00000006835	parn	100	64.912	Pundamilia_nyererei
ENSSTOG00000007519	PARN	85	71.429	ENSPNAG00000018905	parn	86	71.429	Pygocentrus_nattereri
ENSSTOG00000007519	PARN	51	30.422	ENSRNOG00000023140	Pnldc1	89	30.422	Rattus_norvegicus
ENSSTOG00000007519	PARN	100	83.079	ENSRNOG00000002912	Parn	97	90.816	Rattus_norvegicus
ENSSTOG00000007519	PARN	52	87.688	ENSRBIG00000018726	PARN	100	87.688	Rhinopithecus_bieti
ENSSTOG00000007519	PARN	52	87.688	ENSRROG00000011162	-	100	87.688	Rhinopithecus_roxellana
ENSSTOG00000007519	PARN	100	89.671	ENSSBOG00000034726	PARN	100	96.610	Saimiri_boliviensis_boliviensis
ENSSTOG00000007519	PARN	66	92.584	ENSSHAG00000008493	PARN	94	92.584	Sarcophilus_harrisii
ENSSTOG00000007519	PARN	96	72.204	ENSSFOG00015014165	parn	92	73.380	Scleropages_formosus
ENSSTOG00000007519	PARN	100	62.384	ENSSMAG00000000685	parn	100	62.791	Scophthalmus_maximus
ENSSTOG00000007519	PARN	92	72.279	ENSSDUG00000014555	parn	83	72.279	Seriola_dumerili
ENSSTOG00000007519	PARN	91	79.447	ENSSARG00000014339	PARN	100	79.447	Sorex_araneus
ENSSTOG00000007519	PARN	100	82.915	ENSSPUG00000007719	PARN	100	82.915	Sphenodon_punctatus
ENSSTOG00000007519	PARN	91	74.221	ENSSPAG00000007095	parn	89	71.818	Stegastes_partitus
ENSSTOG00000007519	PARN	100	90.596	ENSSSCG00000007878	PARN	89	90.596	Sus_scrofa
ENSSTOG00000007519	PARN	55	30.362	ENSTGUG00000011418	PNLDC1	68	30.362	Taeniopygia_guttata
ENSSTOG00000007519	PARN	99	81.675	ENSTGUG00000004971	PARN	99	81.675	Taeniopygia_guttata
ENSSTOG00000007519	PARN	100	68.576	ENSTNIG00000008252	parn	100	68.731	Tetraodon_nigroviridis
ENSSTOG00000007519	PARN	91	77.029	ENSTBEG00000010407	PARN	100	77.029	Tupaia_belangeri
ENSSTOG00000007519	PARN	99	87.322	ENSTTRG00000002843	PARN	100	87.322	Tursiops_truncatus
ENSSTOG00000007519	PARN	74	77.778	ENSUAMG00000008283	PARN	96	77.778	Ursus_americanus
ENSSTOG00000007519	PARN	100	91.536	ENSUMAG00000004527	PARN	100	91.536	Ursus_maritimus
ENSSTOG00000007519	PARN	96	88.889	ENSVPAG00000008968	PARN	99	88.889	Vicugna_pacos
ENSSTOG00000007519	PARN	100	91.693	ENSVVUG00000019509	PARN	100	91.693	Vulpes_vulpes
ENSSTOG00000007519	PARN	100	73.742	ENSXETG00000010994	parn	100	81.559	Xenopus_tropicalis
ENSSTOG00000007519	PARN	91	69.178	ENSXCOG00000015990	parn	96	68.687	Xiphophorus_couchianus
ENSSTOG00000007519	PARN	92	72.391	ENSXMAG00000014783	parn	84	72.391	Xiphophorus_maculatus