EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSTOG00000007780 (Gene tree)
Gene ID: 101964838
Gene Symbol: MBD1
Alias: CXXC3|PCM1
Full Name: methyl-CpG binding domain protein 1
Gene Type: protein_coding
Species: Ictidomys_tridecemlineatus
Status: putative
Strand: Plus strand
Length: 22766 bases
Position: chrJH393307.1:12848874-12871639
Accession: 101964838
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSTOP00000006977	MBD	PF01429.19	1.3e-15	1	1
ENSSTOP00000028009	MBD	PF01429.19	1.3e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSTOT00000007791	MBD1-201	6159	XM_005323071	ENSSTOP00000006977	615 (aa)	XP_005323128	I3MAF7
ENSSTOT00000035707	MBD1-202	6087	XM_013357592	ENSSTOP00000028009	626 (aa)	XP_013213046	A0A287D3A7

Gene Model

Click here to download ENSSTOG00000007780's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSTOG00000007780's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSTOG00000007780	MBD1	100	83.902	ENSG00000141644	MBD1	99	87.898	Homo_sapiens
ENSSTOG00000007780	MBD1	100	78.471	ENSAMEG00000000238	MBD1	96	78.816	Ailuropoda_melanoleuca
ENSSTOG00000007780	MBD1	51	58.025	ENSATEG00000009608	mbd1b	50	34.694	Anabas_testudineus
ENSSTOG00000007780	MBD1	64	43.171	ENSACAG00000006091	-	100	42.857	Anolis_carolinensis
ENSSTOG00000007780	MBD1	100	82.753	ENSANAG00000036253	MBD1	100	82.437	Aotus_nancymaae
ENSSTOG00000007780	MBD1	100	80.163	ENSBTAG00000003801	MBD1	100	80.844	Bos_taurus
ENSSTOG00000007780	MBD1	98	83.721	ENSCJAG00000004959	MBD1	100	79.721	Callithrix_jacchus
ENSSTOG00000007780	MBD1	100	77.379	ENSCAFG00000018928	MBD1	96	78.003	Canis_familiaris
ENSSTOG00000007780	MBD1	100	77.914	ENSCAFG00020024272	MBD1	100	78.374	Canis_lupus_dingo
ENSSTOG00000007780	MBD1	100	79.837	ENSCHIG00000021134	MBD1	100	80.519	Capra_hircus
ENSSTOG00000007780	MBD1	98	82.392	ENSTSYG00000000509	MBD1	100	79.375	Carlito_syrichta
ENSSTOG00000007780	MBD1	100	63.116	ENSCAPG00000015782	MBD1	100	62.957	Cavia_aperea
ENSSTOG00000007780	MBD1	100	75.951	ENSCPOG00000001671	MBD1	100	74.458	Cavia_porcellus
ENSSTOG00000007780	MBD1	100	82.287	ENSCCAG00000034600	MBD1	92	80.389	Cebus_capucinus
ENSSTOG00000007780	MBD1	100	83.740	ENSCATG00000029959	MBD1	100	83.415	Cercocebus_atys
ENSSTOG00000007780	MBD1	100	82.812	ENSCLAG00000007457	MBD1	89	82.656	Chinchilla_lanigera
ENSSTOG00000007780	MBD1	100	83.740	ENSCSAG00000018070	MBD1	100	83.415	Chlorocebus_sabaeus
ENSSTOG00000007780	MBD1	100	83.415	ENSCANG00000033425	MBD1	100	83.089	Colobus_angolensis_palliatus
ENSSTOG00000007780	MBD1	100	74.322	ENSCGRG00001014843	Mbd1	100	74.163	Cricetulus_griseus_chok1gshd
ENSSTOG00000007780	MBD1	100	58.533	ENSCGRG00000014135	Mbd1	100	58.280	Cricetulus_griseus_crigri
ENSSTOG00000007780	MBD1	100	72.546	ENSDNOG00000015998	MBD1	100	73.926	Dasypus_novemcinctus
ENSSTOG00000007780	MBD1	100	68.740	ENSDORG00000013917	Mbd1	100	68.581	Dipodomys_ordii
ENSSTOG00000007780	MBD1	100	78.768	ENSEASG00005003857	MBD1	100	78.867	Equus_asinus_asinus
ENSSTOG00000007780	MBD1	100	81.169	ENSECAG00000011497	MBD1	80	81.848	Equus_caballus
ENSSTOG00000007780	MBD1	98	82.285	ENSFCAG00000015730	MBD1	100	79.283	Felis_catus
ENSSTOG00000007780	MBD1	99	66.190	ENSFDAG00000011085	MBD1	97	67.576	Fukomys_damarensis
ENSSTOG00000007780	MBD1	64	32.316	ENSGACG00000012106	-	58	31.043	Gasterosteus_aculeatus
ENSSTOG00000007780	MBD1	100	83.740	ENSGGOG00000016966	MBD1	100	83.415	Gorilla_gorilla
ENSSTOG00000007780	MBD1	100	85.691	ENSHGLG00000008740	MBD1	100	85.528	Heterocephalus_glaber_female
ENSSTOG00000007780	MBD1	92	78.125	ENSHGLG00100005198	MBD1	100	78.505	Heterocephalus_glaber_male
ENSSTOG00000007780	MBD1	100	66.984	ENSJJAG00000022859	Mbd1	100	66.825	Jaculus_jaculus
ENSSTOG00000007780	MBD1	65	40.049	ENSLACG00000002414	-	58	40.049	Latimeria_chalumnae
ENSSTOG00000007780	MBD1	100	71.835	ENSLAFG00000031328	MBD1	100	71.835	Loxodonta_africana
ENSSTOG00000007780	MBD1	100	83.415	ENSMFAG00000026335	MBD1	100	83.252	Macaca_fascicularis
ENSSTOG00000007780	MBD1	100	80.156	ENSMMUG00000009050	MBD1	100	80.000	Macaca_mulatta
ENSSTOG00000007780	MBD1	100	83.415	ENSMNEG00000038822	MBD1	100	83.252	Macaca_nemestrina
ENSSTOG00000007780	MBD1	100	83.740	ENSMLEG00000043121	MBD1	100	83.415	Mandrillus_leucophaeus
ENSSTOG00000007780	MBD1	100	82.720	ENSMICG00000006414	MBD1	100	82.880	Microcebus_murinus
ENSSTOG00000007780	MBD1	68	40.826	ENSMODG00000001286	-	61	41.230	Monodelphis_domestica
ENSSTOG00000007780	MBD1	100	67.123	ENSMUSG00000024561	Mbd1	100	66.819	Mus_musculus
ENSSTOG00000007780	MBD1	100	67.762	MGP_PahariEiJ_G0019128	Mbd1	100	67.453	Mus_pahari
ENSSTOG00000007780	MBD1	98	67.886	MGP_SPRETEiJ_G0023304	Mbd1	99	67.727	Mus_spretus
ENSSTOG00000007780	MBD1	100	78.193	ENSMPUG00000008843	MBD1	96	78.349	Mustela_putorius_furo
ENSSTOG00000007780	MBD1	100	77.031	ENSMLUG00000008286	MBD1	96	76.875	Myotis_lucifugus
ENSSTOG00000007780	MBD1	100	66.823	ENSNGAG00000011412	Mbd1	100	66.823	Nannospalax_galili
ENSSTOG00000007780	MBD1	100	82.927	ENSNLEG00000011661	-	100	82.602	Nomascus_leucogenys
ENSSTOG00000007780	MBD1	98	65.615	ENSNLEG00000032711	-	89	65.282	Nomascus_leucogenys
ENSSTOG00000007780	MBD1	100	72.358	ENSOPRG00000007647	MBD1	100	72.520	Ochotona_princeps
ENSSTOG00000007780	MBD1	100	73.927	ENSODEG00000018451	MBD1	100	73.609	Octodon_degus
ENSSTOG00000007780	MBD1	84	45.255	ENSOANG00000014593	-	99	45.880	Ornithorhynchus_anatinus
ENSSTOG00000007780	MBD1	100	76.516	ENSOCUG00000006554	MBD1	100	78.003	Oryctolagus_cuniculus
ENSSTOG00000007780	MBD1	100	78.328	ENSOGAG00000003784	MBD1	96	77.864	Otolemur_garnettii
ENSSTOG00000007780	MBD1	100	76.443	ENSOARG00000004218	MBD1	95	77.103	Ovis_aries
ENSSTOG00000007780	MBD1	100	83.902	ENSPPAG00000038886	MBD1	100	83.415	Pan_paniscus
ENSSTOG00000007780	MBD1	100	82.820	ENSPPRG00000021387	MBD1	100	82.658	Panthera_pardus
ENSSTOG00000007780	MBD1	100	82.658	ENSPTIG00000021231	MBD1	100	82.496	Panthera_tigris_altaica
ENSSTOG00000007780	MBD1	100	83.902	ENSPTRG00000010021	MBD1	100	83.415	Pan_troglodytes
ENSSTOG00000007780	MBD1	98	83.389	ENSPANG00000010867	MBD1	100	80.156	Papio_anubis
ENSSTOG00000007780	MBD1	100	60.469	ENSPEMG00000022630	Mbd1	100	60.156	Peromyscus_maniculatus_bairdii
ENSSTOG00000007780	MBD1	96	45.942	ENSPCIG00000027937	-	79	46.667	Phascolarctos_cinereus
ENSSTOG00000007780	MBD1	100	83.577	ENSPPYG00000009158	MBD1	91	83.252	Pongo_abelii
ENSSTOG00000007780	MBD1	99	71.220	ENSPCAG00000001648	MBD1	99	71.220	Procavia_capensis
ENSSTOG00000007780	MBD1	100	84.091	ENSPCOG00000012450	MBD1	100	84.091	Propithecus_coquereli
ENSSTOG00000007780	MBD1	100	52.336	ENSRNOG00000024104	Mbd1	100	53.135	Rattus_norvegicus
ENSSTOG00000007780	MBD1	100	75.935	ENSRBIG00000041294	MBD1	100	75.610	Rhinopithecus_bieti
ENSSTOG00000007780	MBD1	100	83.415	ENSRROG00000032517	MBD1	100	83.089	Rhinopithecus_roxellana
ENSSTOG00000007780	MBD1	98	83.056	ENSSBOG00000027169	MBD1	92	81.892	Saimiri_boliviensis_boliviensis
ENSSTOG00000007780	MBD1	76	45.283	ENSSHAG00000003661	-	100	45.720	Sarcophilus_harrisii
ENSSTOG00000007780	MBD1	100	79.187	ENSSSCG00000004516	MBD1	100	79.024	Sus_scrofa
ENSSTOG00000007780	MBD1	66	31.395	ENSTRUG00000013422	mbd1b	52	30.580	Takifugu_rubripes
ENSSTOG00000007780	MBD1	68	80.083	ENSTBEG00000012651	-	68	80.083	Tupaia_belangeri
ENSSTOG00000007780	MBD1	100	77.958	ENSTTRG00000015523	MBD1	100	78.282	Tursiops_truncatus
ENSSTOG00000007780	MBD1	100	78.247	ENSUAMG00000004752	MBD1	100	78.930	Ursus_americanus
ENSSTOG00000007780	MBD1	100	81.494	ENSUMAG00000002947	MBD1	100	81.848	Ursus_maritimus