EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSTOG00000007989 (Gene tree)
Gene ID: 101968000
Gene Symbol: MRPS18C
Alias: CGI-134|FLJ11146|FLJ22967|MRPS18-1
Full Name: mitochondrial ribosomal protein S18C
Gene Type: protein_coding
Species: Ictidomys_tridecemlineatus
Status: putative
Strand: Minus strand
Length: 7773 bases
Position: chrJH393548.1:1216237-1224009
Accession: 101968000
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSTOP00000007146	Ribosomal_S18	PF01084.20	8e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSTOT00000007984	MRPS18C-201	3722	XM_005339306	ENSSTOP00000007146	143 (aa)	XP_005339363	I3MAT1

Gene Model

Click here to download ENSSTOG00000007989's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSTOG00000007989's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSTOG00000007989	MRPS18C	84	32.031	ENSSTOG00000004490	MRPS18A	60	32.031

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSTOG00000007989	MRPS18C	100	84.722	ENSG00000163319	MRPS18C	100	84.722	Homo_sapiens
ENSSTOG00000007989	MRPS18C	100	77.083	ENSAMEG00000004915	MRPS18C	100	77.083	Ailuropoda_melanoleuca
ENSSTOG00000007989	MRPS18C	100	73.611	ENSANAG00000028055	-	100	73.611	Aotus_nancymaae
ENSSTOG00000007989	MRPS18C	99	70.667	ENSANAG00000025323	-	95	70.667	Aotus_nancymaae
ENSSTOG00000007989	MRPS18C	100	60.417	ENSBTAG00000049836	-	100	60.417	Bos_taurus
ENSSTOG00000007989	MRPS18C	100	85.417	ENSBTAG00000018155	MRPS18C	100	85.417	Bos_taurus
ENSSTOG00000007989	MRPS18C	100	84.028	ENSCJAG00000042247	MRPS18C	97	84.028	Callithrix_jacchus
ENSSTOG00000007989	MRPS18C	100	82.639	ENSCAFG00020010491	MRPS18C	100	82.639	Canis_lupus_dingo
ENSSTOG00000007989	MRPS18C	92	90.076	ENSCHIG00000004461	-	91	90.076	Capra_hircus
ENSSTOG00000007989	MRPS18C	75	71.963	ENSCHIG00000019359	-	98	71.963	Capra_hircus
ENSSTOG00000007989	MRPS18C	100	56.250	ENSCHIG00000016551	-	100	56.250	Capra_hircus
ENSSTOG00000007989	MRPS18C	100	75.694	ENSCHIG00000022740	-	100	75.694	Capra_hircus
ENSSTOG00000007989	MRPS18C	99	68.750	ENSCHIG00000018805	-	99	68.750	Capra_hircus
ENSSTOG00000007989	MRPS18C	100	81.944	ENSTSYG00000012924	MRPS18C	100	81.944	Carlito_syrichta
ENSSTOG00000007989	MRPS18C	100	81.944	ENSCPOG00000009198	MRPS18C	100	81.944	Cavia_porcellus
ENSSTOG00000007989	MRPS18C	99	70.629	ENSCCAG00000025155	-	95	70.629	Cebus_capucinus
ENSSTOG00000007989	MRPS18C	100	81.944	ENSCCAG00000019347	-	100	81.944	Cebus_capucinus
ENSSTOG00000007989	MRPS18C	100	74.306	ENSCCAG00000028283	-	100	74.306	Cebus_capucinus
ENSSTOG00000007989	MRPS18C	100	84.028	ENSCCAG00000026577	-	100	84.028	Cebus_capucinus
ENSSTOG00000007989	MRPS18C	100	84.722	ENSCATG00000040697	MRPS18C	100	84.722	Cercocebus_atys
ENSSTOG00000007989	MRPS18C	100	84.028	ENSCLAG00000017397	-	100	84.028	Chinchilla_lanigera
ENSSTOG00000007989	MRPS18C	100	84.247	ENSCLAG00000008205	-	100	84.247	Chinchilla_lanigera
ENSSTOG00000007989	MRPS18C	100	70.833	ENSCANG00000041165	-	100	70.833	Colobus_angolensis_palliatus
ENSSTOG00000007989	MRPS18C	100	84.722	ENSCANG00000038907	MRPS18C	100	84.722	Colobus_angolensis_palliatus
ENSSTOG00000007989	MRPS18C	99	64.085	ENSCANG00000037347	-	97	64.085	Colobus_angolensis_palliatus
ENSSTOG00000007989	MRPS18C	100	80.420	ENSCGRG00001000103	Mrps18c	100	80.420	Cricetulus_griseus_chok1gshd
ENSSTOG00000007989	MRPS18C	100	80.420	ENSCGRG00000002192	Mrps18c	100	80.420	Cricetulus_griseus_crigri
ENSSTOG00000007989	MRPS18C	99	80.986	ENSDORG00000012749	Mrps18c	100	80.986	Dipodomys_ordii
ENSSTOG00000007989	MRPS18C	100	54.167	ENSETEG00000012223	-	100	54.167	Echinops_telfairi
ENSSTOG00000007989	MRPS18C	100	86.713	ENSEASG00005013234	MRPS18C	100	86.713	Equus_asinus_asinus
ENSSTOG00000007989	MRPS18C	100	86.014	ENSECAG00000020387	MRPS18C	100	86.014	Equus_caballus
ENSSTOG00000007989	MRPS18C	100	59.722	ENSEEUG00000003504	MRPS18C	99	59.722	Erinaceus_europaeus
ENSSTOG00000007989	MRPS18C	100	83.333	ENSFCAG00000042464	MRPS18C	100	83.333	Felis_catus
ENSSTOG00000007989	MRPS18C	100	82.639	ENSFDAG00000000250	-	100	82.639	Fukomys_damarensis
ENSSTOG00000007989	MRPS18C	100	72.222	ENSFDAG00000008778	-	100	72.222	Fukomys_damarensis
ENSSTOG00000007989	MRPS18C	100	70.139	ENSGGOG00000008603	MRPS18C	100	70.139	Gorilla_gorilla
ENSSTOG00000007989	MRPS18C	100	57.639	ENSGGOG00000037903	-	100	57.639	Gorilla_gorilla
ENSSTOG00000007989	MRPS18C	100	63.889	ENSGGOG00000040785	-	100	63.889	Gorilla_gorilla
ENSSTOG00000007989	MRPS18C	100	77.778	ENSHGLG00000020134	-	100	77.778	Heterocephalus_glaber_female
ENSSTOG00000007989	MRPS18C	100	84.247	ENSHGLG00000002953	-	100	84.247	Heterocephalus_glaber_female
ENSSTOG00000007989	MRPS18C	100	76.923	ENSHGLG00000012671	-	98	76.923	Heterocephalus_glaber_female
ENSSTOG00000007989	MRPS18C	100	77.778	ENSHGLG00100019678	-	100	77.778	Heterocephalus_glaber_male
ENSSTOG00000007989	MRPS18C	100	84.247	ENSHGLG00100016235	-	100	84.247	Heterocephalus_glaber_male
ENSSTOG00000007989	MRPS18C	100	76.923	ENSHGLG00100015568	-	98	76.923	Heterocephalus_glaber_male
ENSSTOG00000007989	MRPS18C	50	88.889	ENSJJAG00000022437	Mrps18c	74	88.889	Jaculus_jaculus
ENSSTOG00000007989	MRPS18C	100	83.333	ENSLAFG00000001059	MRPS18C	100	83.333	Loxodonta_africana
ENSSTOG00000007989	MRPS18C	100	68.056	ENSMFAG00000041276	-	100	68.056	Macaca_fascicularis
ENSSTOG00000007989	MRPS18C	100	84.028	ENSMFAG00000003991	MRPS18C	100	84.028	Macaca_fascicularis
ENSSTOG00000007989	MRPS18C	100	66.667	ENSMMUG00000015353	MRPS18C	100	66.667	Macaca_mulatta
ENSSTOG00000007989	MRPS18C	100	75.000	ENSMMUG00000048717	-	100	75.000	Macaca_mulatta
ENSSTOG00000007989	MRPS18C	100	73.611	ENSMMUG00000039146	-	100	73.611	Macaca_mulatta
ENSSTOG00000007989	MRPS18C	100	64.583	ENSMNEG00000018700	-	100	64.583	Macaca_nemestrina
ENSSTOG00000007989	MRPS18C	100	84.028	ENSMNEG00000043663	MRPS18C	100	84.028	Macaca_nemestrina
ENSSTOG00000007989	MRPS18C	100	84.722	ENSMLEG00000038884	MRPS18C	100	84.722	Mandrillus_leucophaeus
ENSSTOG00000007989	MRPS18C	100	81.250	ENSMICG00000032609	-	100	81.250	Microcebus_murinus
ENSSTOG00000007989	MRPS18C	100	62.500	ENSMICG00000037615	-	100	62.500	Microcebus_murinus
ENSSTOG00000007989	MRPS18C	100	76.923	ENSMOCG00000009898	-	100	76.923	Microtus_ochrogaster
ENSSTOG00000007989	MRPS18C	100	77.622	ENSMOCG00000015591	-	100	77.622	Microtus_ochrogaster
ENSSTOG00000007989	MRPS18C	97	71.831	ENSMODG00000020773	MRPS18C	99	71.831	Monodelphis_domestica
ENSSTOG00000007989	MRPS18C	100	77.241	MGP_CAROLIEiJ_G0027458	Mrps18c	100	77.241	Mus_caroli
ENSSTOG00000007989	MRPS18C	100	77.931	ENSMUSG00000016833	Mrps18c	100	77.931	Mus_musculus
ENSSTOG00000007989	MRPS18C	100	78.621	MGP_PahariEiJ_G0017236	Mrps18c	100	78.621	Mus_pahari
ENSSTOG00000007989	MRPS18C	83	74.380	MGP_SPRETEiJ_G0028455	Mrps18c	93	74.380	Mus_spretus
ENSSTOG00000007989	MRPS18C	100	81.250	ENSMLUG00000017057	MRPS18C	100	81.250	Myotis_lucifugus
ENSSTOG00000007989	MRPS18C	87	88.710	ENSNGAG00000015980	Mrps18c	100	82.517	Nannospalax_galili
ENSSTOG00000007989	MRPS18C	100	78.472	ENSNLEG00000018188	-	100	78.472	Nomascus_leucogenys
ENSSTOG00000007989	MRPS18C	100	84.722	ENSNLEG00000009119	MRPS18C	100	84.722	Nomascus_leucogenys
ENSSTOG00000007989	MRPS18C	69	77.551	ENSOPRG00000004113	MRPS18C	68	77.551	Ochotona_princeps
ENSSTOG00000007989	MRPS18C	100	84.028	ENSODEG00000020349	-	100	84.028	Octodon_degus
ENSSTOG00000007989	MRPS18C	100	82.877	ENSODEG00000007599	-	100	82.877	Octodon_degus
ENSSTOG00000007989	MRPS18C	100	86.111	ENSOARG00000002770	MRPS18C	100	86.111	Ovis_aries
ENSSTOG00000007989	MRPS18C	100	84.722	ENSPPAG00000037122	MRPS18C	100	84.722	Pan_paniscus
ENSSTOG00000007989	MRPS18C	100	58.333	ENSPPAG00000037400	-	100	58.333	Pan_paniscus
ENSSTOG00000007989	MRPS18C	100	82.639	ENSPPRG00000011089	MRPS18C	100	82.639	Panthera_pardus
ENSSTOG00000007989	MRPS18C	100	81.944	ENSPTIG00000021242	MRPS18C	100	81.944	Panthera_tigris_altaica
ENSSTOG00000007989	MRPS18C	100	56.250	ENSPTRG00000047058	-	100	56.250	Pan_troglodytes
ENSSTOG00000007989	MRPS18C	100	84.722	ENSPTRG00000016233	MRPS18C	100	84.722	Pan_troglodytes
ENSSTOG00000007989	MRPS18C	100	73.611	ENSPANG00000034202	-	100	73.611	Papio_anubis
ENSSTOG00000007989	MRPS18C	100	83.333	ENSPANG00000033931	MRPS18C	100	83.333	Papio_anubis
ENSSTOG00000007989	MRPS18C	100	82.517	ENSPEMG00000008390	Mrps18c	100	82.517	Peromyscus_maniculatus_bairdii
ENSSTOG00000007989	MRPS18C	98	61.806	ENSPCIG00000000097	-	99	61.806	Phascolarctos_cinereus
ENSSTOG00000007989	MRPS18C	71	91.176	ENSPCIG00000019737	-	100	91.176	Phascolarctos_cinereus
ENSSTOG00000007989	MRPS18C	99	71.631	ENSPCIG00000005376	-	100	71.631	Phascolarctos_cinereus
ENSSTOG00000007989	MRPS18C	100	86.111	ENSPPYG00000025867	MRPS18C	100	86.111	Pongo_abelii
ENSSTOG00000007989	MRPS18C	99	80.986	ENSPPYG00000025835	-	99	80.986	Pongo_abelii
ENSSTOG00000007989	MRPS18C	100	77.778	ENSPCAG00000004975	MRPS18C	100	77.778	Procavia_capensis
ENSSTOG00000007989	MRPS18C	100	84.722	ENSPCOG00000017634	MRPS18C	100	84.722	Propithecus_coquereli
ENSSTOG00000007989	MRPS18C	69	80.808	ENSPVAG00000006439	MRPS18C	100	80.808	Pteropus_vampyrus
ENSSTOG00000007989	MRPS18C	100	77.241	ENSRNOG00000002178	Mrps18c	100	77.241	Rattus_norvegicus
ENSSTOG00000007989	MRPS18C	100	56.250	ENSRBIG00000031637	-	100	56.250	Rhinopithecus_bieti
ENSSTOG00000007989	MRPS18C	100	75.000	ENSRBIG00000035023	-	100	75.000	Rhinopithecus_bieti
ENSSTOG00000007989	MRPS18C	100	84.722	ENSRBIG00000041685	MRPS18C	100	84.722	Rhinopithecus_bieti
ENSSTOG00000007989	MRPS18C	100	75.000	ENSRROG00000033834	-	100	75.000	Rhinopithecus_roxellana
ENSSTOG00000007989	MRPS18C	100	56.944	ENSRROG00000030722	-	100	56.944	Rhinopithecus_roxellana
ENSSTOG00000007989	MRPS18C	100	84.722	ENSRROG00000044334	MRPS18C	100	84.722	Rhinopithecus_roxellana
ENSSTOG00000007989	MRPS18C	96	70.073	ENSSBOG00000032292	-	99	70.073	Saimiri_boliviensis_boliviensis
ENSSTOG00000007989	MRPS18C	100	83.333	ENSSBOG00000027568	-	100	83.333	Saimiri_boliviensis_boliviensis
ENSSTOG00000007989	MRPS18C	99	74.126	ENSSBOG00000022205	-	92	74.126	Saimiri_boliviensis_boliviensis
ENSSTOG00000007989	MRPS18C	100	63.889	ENSSBOG00000029234	-	100	63.889	Saimiri_boliviensis_boliviensis
ENSSTOG00000007989	MRPS18C	76	90.826	ENSSHAG00000007084	MRPS18C	76	90.826	Sarcophilus_harrisii
ENSSTOG00000007989	MRPS18C	100	84.722	ENSSSCG00000038042	MRPS18C	100	84.722	Sus_scrofa
ENSSTOG00000007989	MRPS18C	100	84.722	ENSTBEG00000012505	MRPS18C	100	84.722	Tupaia_belangeri
ENSSTOG00000007989	MRPS18C	100	85.417	ENSTTRG00000004897	MRPS18C	100	85.417	Tursiops_truncatus
ENSSTOG00000007989	MRPS18C	100	87.500	ENSUAMG00000012878	MRPS18C	100	87.500	Ursus_americanus
ENSSTOG00000007989	MRPS18C	100	87.500	ENSUMAG00000008829	MRPS18C	100	87.500	Ursus_maritimus
ENSSTOG00000007989	MRPS18C	100	82.639	ENSVPAG00000011358	MRPS18C	100	82.639	Vicugna_pacos
ENSSTOG00000007989	MRPS18C	100	83.333	ENSVVUG00000015672	MRPS18C	100	83.333	Vulpes_vulpes