EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSTOG00000008120 (Gene tree)
Gene ID: 101962252
Gene Symbol: -
Alias: -
Full Name: zinc finger CCCH-type containing 6
Gene Type: protein_coding
Species: Ictidomys_tridecemlineatus
Status: putative
Strand: Plus strand
Length: 32859 bases
Position: chrJH393593.1:903335-936193
Accession: 101962252
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSTOP00000007286	zf-CCCH	PF00642.24	5.5e-12	1	2
ENSSTOP00000007286	zf-CCCH	PF00642.24	5.5e-12	2	2
ENSSTOP00000007286	zf-CCCH_2	PF14608.6	1.2e-05	1	2
ENSSTOP00000007286	zf-CCCH_2	PF14608.6	1.2e-05	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSTOT00000008134	-	3367	XM_005340252	ENSSTOP00000007286	1056 (aa)	XP_021575831	I3MB37

Gene Model

Click here to download ENSSTOG00000008120's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSTOG00000008120's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSTOG00000008120	-	63	46.328	ENSSTOG00000016249	ZC3H4	79	33.241

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSTOG00000008120	-	100	84.939	ENSG00000188177	ZC3H6	90	84.939	Homo_sapiens
ENSSTOG00000008120	-	87	42.784	ENSAPOG00000002681	zc3h6	86	40.650	Acanthochromis_polyacanthus
ENSSTOG00000008120	-	100	81.391	ENSAMEG00000016194	ZC3H6	90	81.391	Ailuropoda_melanoleuca
ENSSTOG00000008120	-	87	42.347	ENSAOCG00000004039	zc3h6	86	40.162	Amphiprion_ocellaris
ENSSTOG00000008120	-	87	42.375	ENSAPEG00000014561	zc3h6	86	40.181	Amphiprion_percula
ENSSTOG00000008120	-	88	42.540	ENSATEG00000019063	zc3h6	86	41.357	Anabas_testudineus
ENSSTOG00000008120	-	100	63.109	ENSAPLG00000014287	ZC3H6	90	63.569	Anas_platyrhynchos
ENSSTOG00000008120	-	100	84.766	ENSANAG00000024229	ZC3H6	90	84.766	Aotus_nancymaae
ENSSTOG00000008120	-	88	41.835	ENSACLG00000026343	zc3h6	87	40.921	Astatotilapia_calliptera
ENSSTOG00000008120	-	100	84.953	ENSCJAG00000016479	ZC3H6	90	84.953	Callithrix_jacchus
ENSSTOG00000008120	-	100	82.126	ENSCAFG00000007160	ZC3H6	90	82.801	Canis_familiaris
ENSSTOG00000008120	-	100	81.091	ENSCAFG00020017525	ZC3H6	90	81.767	Canis_lupus_dingo
ENSSTOG00000008120	-	89	77.474	ENSCHIG00000019719	-	95	78.108	Capra_hircus
ENSSTOG00000008120	-	100	84.393	ENSTSYG00000031857	ZC3H6	90	84.766	Carlito_syrichta
ENSSTOG00000008120	-	100	76.614	ENSCPOG00000003445	ZC3H6	90	76.707	Cavia_porcellus
ENSSTOG00000008120	-	100	85.126	ENSCATG00000036595	ZC3H6	100	85.126	Cercocebus_atys
ENSSTOG00000008120	-	100	82.226	ENSCLAG00000006605	ZC3H6	100	82.694	Chinchilla_lanigera
ENSSTOG00000008120	-	100	85.126	ENSCSAG00000016793	ZC3H6	100	85.126	Chlorocebus_sabaeus
ENSSTOG00000008120	-	100	85.126	ENSCANG00000041036	ZC3H6	91	85.126	Colobus_angolensis_palliatus
ENSSTOG00000008120	-	100	76.779	ENSCGRG00001022022	Zc3h6	91	76.685	Cricetulus_griseus_chok1gshd
ENSSTOG00000008120	-	100	77.507	ENSCGRG00000016162	Zc3h6	91	77.413	Cricetulus_griseus_crigri
ENSSTOG00000008120	-	78	54.698	ENSCSEG00000012267	zc3h6	98	40.227	Cynoglossus_semilaevis
ENSSTOG00000008120	-	100	73.893	ENSDNOG00000044811	ZC3H6	90	73.987	Dasypus_novemcinctus
ENSSTOG00000008120	-	100	80.075	ENSDORG00000013967	Zc3h6	91	80.075	Dipodomys_ordii
ENSSTOG00000008120	-	93	83.030	ENSEASG00005006493	ZC3H6	100	83.535	Equus_asinus_asinus
ENSSTOG00000008120	-	100	83.521	ENSECAG00000023620	ZC3H6	90	83.989	Equus_caballus
ENSSTOG00000008120	-	82	71.614	ENSEEUG00000013883	-	75	71.800	Erinaceus_europaeus
ENSSTOG00000008120	-	100	82.425	ENSFCAG00000008089	ZC3H6	90	82.237	Felis_catus
ENSSTOG00000008120	-	100	62.396	ENSFALG00000011589	ZC3H6	90	62.765	Ficedula_albicollis
ENSSTOG00000008120	-	100	82.320	ENSFDAG00000002521	ZC3H6	90	82.694	Fukomys_damarensis
ENSSTOG00000008120	-	100	62.107	ENSGALG00000008269	ZC3H6	88	62.569	Gallus_gallus
ENSSTOG00000008120	-	87	39.895	ENSGAFG00000006771	zc3h6	86	40.314	Gambusia_affinis
ENSSTOG00000008120	-	87	41.736	ENSGACG00000005343	zc3h6	89	39.325	Gasterosteus_aculeatus
ENSSTOG00000008120	-	100	64.358	ENSGAGG00000010857	ZC3H6	91	64.451	Gopherus_agassizii
ENSSTOG00000008120	-	100	85.407	ENSGGOG00000001665	ZC3H6	91	84.659	Gorilla_gorilla
ENSSTOG00000008120	-	88	41.935	ENSHBUG00000010088	zc3h6	87	41.012	Haplochromis_burtoni
ENSSTOG00000008120	-	100	82.397	ENSHGLG00000011882	ZC3H6	87	82.678	Heterocephalus_glaber_female
ENSSTOG00000008120	-	100	79.963	ENSHGLG00100002559	ZC3H6	90	79.494	Heterocephalus_glaber_male
ENSSTOG00000008120	-	87	40.628	ENSHCOG00000012519	zc3h6	86	39.070	Hippocampus_comes
ENSSTOG00000008120	-	99	80.903	ENSJJAG00000013206	Zc3h6	90	80.903	Jaculus_jaculus
ENSSTOG00000008120	-	87	41.280	ENSKMAG00000016252	zc3h6	87	40.089	Kryptolebias_marmoratus
ENSSTOG00000008120	-	70	65.803	ENSLBEG00000003054	zc3h6	83	40.146	Labrus_bergylta
ENSSTOG00000008120	-	98	49.362	ENSLACG00000012014	ZC3H6	89	49.863	Latimeria_chalumnae
ENSSTOG00000008120	-	99	45.654	ENSLOCG00000016548	zc3h6	88	46.027	Lepisosteus_oculatus
ENSSTOG00000008120	-	100	76.844	ENSLAFG00000001151	ZC3H6	96	76.471	Loxodonta_africana
ENSSTOG00000008120	-	100	85.033	ENSMFAG00000036963	ZC3H6	90	85.033	Macaca_fascicularis
ENSSTOG00000008120	-	100	85.033	ENSMMUG00000016430	ZC3H6	90	85.033	Macaca_mulatta
ENSSTOG00000008120	-	100	84.846	ENSMNEG00000031225	ZC3H6	100	84.846	Macaca_nemestrina
ENSSTOG00000008120	-	100	85.220	ENSMLEG00000038821	ZC3H6	90	85.220	Mandrillus_leucophaeus
ENSSTOG00000008120	-	99	40.416	ENSMAMG00000021546	zc3h6	86	40.653	Mastacembelus_armatus
ENSSTOG00000008120	-	88	41.835	ENSMZEG00005006828	zc3h6	87	40.921	Maylandia_zebra
ENSSTOG00000008120	-	100	62.384	ENSMGAG00000003025	ZC3H6	90	62.754	Meleagris_gallopavo
ENSSTOG00000008120	-	100	77.320	ENSMAUG00000017009	Zc3h6	90	77.226	Mesocricetus_auratus
ENSSTOG00000008120	-	100	85.126	ENSMICG00000036353	ZC3H6	90	85.126	Microcebus_murinus
ENSSTOG00000008120	-	100	76.570	ENSMOCG00000002054	Zc3h6	90	76.757	Microtus_ochrogaster
ENSSTOG00000008120	-	100	67.251	ENSMODG00000006612	ZC3H6	91	67.435	Monodelphis_domestica
ENSSTOG00000008120	-	87	41.932	ENSMALG00000002048	zc3h6	84	40.985	Monopterus_albus
ENSSTOG00000008120	-	100	74.064	MGP_CAROLIEiJ_G0024278	Zc3h6	90	73.783	Mus_caroli
ENSSTOG00000008120	-	100	74.603	ENSMUSG00000042851	Zc3h6	90	74.510	Mus_musculus
ENSSTOG00000008120	-	99	73.946	MGP_PahariEiJ_G0025723	Zc3h6	90	73.664	Mus_pahari
ENSSTOG00000008120	-	100	74.323	MGP_SPRETEiJ_G0025198	Zc3h6	90	74.230	Mus_spretus
ENSSTOG00000008120	-	100	81.203	ENSMPUG00000009624	ZC3H6	100	81.861	Mustela_putorius_furo
ENSSTOG00000008120	-	100	78.437	ENSMLUG00000004896	ZC3H6	90	78.437	Myotis_lucifugus
ENSSTOG00000008120	-	100	78.692	ENSNGAG00000013596	Zc3h6	95	78.411	Nannospalax_galili
ENSSTOG00000008120	-	69	65.686	ENSNBRG00000015382	zc3h6	83	42.089	Neolamprologus_brichardi
ENSSTOG00000008120	-	100	84.565	ENSNLEG00000033657	ZC3H6	90	84.565	Nomascus_leucogenys
ENSSTOG00000008120	-	100	77.830	ENSOPRG00000012717	ZC3H6	90	77.736	Ochotona_princeps
ENSSTOG00000008120	-	100	80.827	ENSODEG00000009099	ZC3H6	95	80.827	Octodon_degus
ENSSTOG00000008120	-	99	38.874	ENSONIG00000009880	zc3h6	89	39.302	Oreochromis_niloticus
ENSSTOG00000008120	-	100	67.688	ENSOANG00000012054	-	92	68.081	Ornithorhynchus_anatinus
ENSSTOG00000008120	-	100	82.540	ENSOCUG00000011125	ZC3H6	100	82.633	Oryctolagus_cuniculus
ENSSTOG00000008120	-	87	41.249	ENSORLG00000011179	zc3h6	87	40.325	Oryzias_latipes
ENSSTOG00000008120	-	87	41.146	ENSORLG00020017202	zc3h6	87	40.416	Oryzias_latipes_hni
ENSSTOG00000008120	-	87	41.015	ENSORLG00015001664	zc3h6	87	40.395	Oryzias_latipes_hsok
ENSSTOG00000008120	-	87	41.820	ENSOMEG00000001296	zc3h6	87	40.412	Oryzias_melastigma
ENSSTOG00000008120	-	100	82.881	ENSOGAG00000002556	ZC3H6	91	82.881	Otolemur_garnettii
ENSSTOG00000008120	-	100	79.720	ENSOARG00000014503	ZC3H6	90	79.720	Ovis_aries
ENSSTOG00000008120	-	100	84.846	ENSPPAG00000030495	ZC3H6	91	84.846	Pan_paniscus
ENSSTOG00000008120	-	100	82.039	ENSPPRG00000005673	ZC3H6	90	82.613	Panthera_pardus
ENSSTOG00000008120	-	100	80.917	ENSPTIG00000015800	ZC3H6	90	81.485	Panthera_tigris_altaica
ENSSTOG00000008120	-	100	85.033	ENSPTRG00000012363	ZC3H6	90	85.033	Pan_troglodytes
ENSSTOG00000008120	-	100	85.126	ENSPANG00000025224	ZC3H6	90	85.126	Papio_anubis
ENSSTOG00000008120	-	70	68.229	ENSPKIG00000007353	zc3h6	83	61.864	Paramormyrops_kingsleyae
ENSSTOG00000008120	-	100	64.576	ENSPSIG00000002520	ZC3H6	91	64.668	Pelodiscus_sinensis
ENSSTOG00000008120	-	100	76.673	ENSPEMG00000000918	Zc3h6	91	76.766	Peromyscus_maniculatus_bairdii
ENSSTOG00000008120	-	100	69.907	ENSPCIG00000029741	ZC3H6	100	70.093	Phascolarctos_cinereus
ENSSTOG00000008120	-	87	40.895	ENSPFOG00000015748	zc3h6	88	39.875	Poecilia_formosa
ENSSTOG00000008120	-	87	40.488	ENSPLAG00000002469	zc3h6	88	39.516	Poecilia_latipinna
ENSSTOG00000008120	-	87	40.695	ENSPMEG00000020802	zc3h6	99	40.574	Poecilia_mexicana
ENSSTOG00000008120	-	74	63.592	ENSPREG00000023126	zc3h6	84	55.839	Poecilia_reticulata
ENSSTOG00000008120	-	84	75.084	ENSPCAG00000015468	ZC3H6	75	74.749	Procavia_capensis
ENSSTOG00000008120	-	100	84.659	ENSPCOG00000016627	ZC3H6	90	84.659	Propithecus_coquereli
ENSSTOG00000008120	-	67	69.972	ENSPVAG00000013728	ZC3H6	62	70.083	Pteropus_vampyrus
ENSSTOG00000008120	-	72	65.196	ENSPNYG00000018130	zc3h6	85	41.434	Pundamilia_nyererei
ENSSTOG00000008120	-	87	44.082	ENSPNAG00000009331	zc3h6	85	42.883	Pygocentrus_nattereri
ENSSTOG00000008120	-	99	75.070	ENSRNOG00000026277	Zc3h6	90	74.977	Rattus_norvegicus
ENSSTOG00000008120	-	100	84.860	ENSSBOG00000033489	ZC3H6	100	84.860	Saimiri_boliviensis_boliviensis
ENSSTOG00000008120	-	92	68.643	ENSSHAG00000016634	ZC3H6	100	68.945	Sarcophilus_harrisii
ENSSTOG00000008120	-	99	41.577	ENSSFOG00015004488	zc3h6	88	42.200	Scleropages_formosus
ENSSTOG00000008120	-	50	38.676	ENSSMAG00000008411	zc3h6	82	39.927	Scophthalmus_maximus
ENSSTOG00000008120	-	50	40.137	ENSSDUG00000006105	zc3h6	86	40.844	Seriola_dumerili
ENSSTOG00000008120	-	50	39.931	ENSSLDG00000021813	zc3h6	86	40.827	Seriola_lalandi_dorsalis
ENSSTOG00000008120	-	100	76.404	ENSSARG00000001035	ZC3H6	91	76.404	Sorex_araneus
ENSSTOG00000008120	-	63	58.140	ENSSPUG00000013031	-	82	32.666	Sphenodon_punctatus
ENSSTOG00000008120	-	100	81.946	ENSSSCG00000008096	ZC3H6	90	81.946	Sus_scrofa
ENSSTOG00000008120	-	100	62.454	ENSTGUG00000007468	ZC3H6	90	62.823	Taeniopygia_guttata
ENSSTOG00000008120	-	99	39.260	ENSTRUG00000012901	zc3h6	87	39.837	Takifugu_rubripes
ENSSTOG00000008120	-	99	40.055	ENSTNIG00000016608	zc3h6	98	39.980	Tetraodon_nigroviridis
ENSSTOG00000008120	-	92	85.537	ENSTBEG00000016232	ZC3H6	88	85.537	Tupaia_belangeri
ENSSTOG00000008120	-	75	84.008	ENSTTRG00000013154	ZC3H6	67	85.149	Tursiops_truncatus
ENSSTOG00000008120	-	100	81.844	ENSUAMG00000002401	ZC3H6	100	82.126	Ursus_americanus
ENSSTOG00000008120	-	100	81.562	ENSUMAG00000008663	ZC3H6	100	83.071	Ursus_maritimus
ENSSTOG00000008120	-	100	80.827	ENSVPAG00000005912	ZC3H6	91	80.827	Vicugna_pacos
ENSSTOG00000008120	-	100	82.613	ENSVVUG00000028662	ZC3H6	100	82.895	Vulpes_vulpes
ENSSTOG00000008120	-	87	58.594	ENSXETG00000013762	zc3h6	83	60.251	Xenopus_tropicalis
ENSSTOG00000008120	-	61	63.592	ENSXCOG00000011662	zc3h6	77	56.391	Xiphophorus_couchianus
ENSSTOG00000008120	-	87	40.389	ENSXMAG00000020822	zc3h6	87	39.044	Xiphophorus_maculatus