EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSTOG00000008416 (Gene tree)
Gene ID: 101972295
Gene Symbol: SSB
Alias: LARP3|La|La/SSB
Full Name: Sjogren syndrome antigen B
Gene Type: protein_coding
Species: Ictidomys_tridecemlineatus
Status: putative
Strand: Plus strand
Length: 11750 bases
Position: chrJH393319.1:286398-298147
Accession: 101972295
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSTOP00000007535	RRM_1	PF00076.22	5.9e-15	1	1
ENSSTOP00000007535	RRM_3	PF08777.11	2.8e-31	1	1
ENSSTOP00000007535	La	PF05383.17	5.5e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSTOT00000008409	SSB-201	4067	XM_005324572	ENSSTOP00000007535	404 (aa)	XP_005324629	I3MBK7

Gene Model

Click here to download ENSSTOG00000008416's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSTOG00000008416's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSTOG00000008416	SSB	100	95.343	ENSG00000138385	SSB	100	98.370	Homo_sapiens
ENSSTOG00000008416	SSB	98	54.478	ENSAPOG00000003448	ssb	100	55.419	Acanthochromis_polyacanthus
ENSSTOG00000008416	SSB	100	91.667	ENSAMEG00000010507	SSB	100	91.667	Ailuropoda_melanoleuca
ENSSTOG00000008416	SSB	92	57.373	ENSACIG00000001738	ssb	97	57.867	Amphilophus_citrinellus
ENSSTOG00000008416	SSB	98	54.975	ENSAOCG00000020398	ssb	100	55.665	Amphiprion_ocellaris
ENSSTOG00000008416	SSB	98	55.224	ENSAPEG00000020395	ssb	100	55.911	Amphiprion_percula
ENSSTOG00000008416	SSB	99	57.882	ENSATEG00000016884	ssb	100	58.374	Anabas_testudineus
ENSSTOG00000008416	SSB	100	72.170	ENSAPLG00000006109	SSB	100	72.170	Anas_platyrhynchos
ENSSTOG00000008416	SSB	100	66.504	ENSACAG00000017008	SSB	99	66.504	Anolis_carolinensis
ENSSTOG00000008416	SSB	100	86.420	ENSANAG00000027195	-	100	86.420	Aotus_nancymaae
ENSSTOG00000008416	SSB	99	54.591	ENSACLG00000010798	ssb	100	54.703	Astatotilapia_calliptera
ENSSTOG00000008416	SSB	98	55.147	ENSAMXG00000012606	ssb	100	56.659	Astyanax_mexicanus
ENSSTOG00000008416	SSB	100	94.815	ENSBTAG00000008716	SSB	100	94.815	Bos_taurus
ENSSTOG00000008416	SSB	73	34.768	WBGene00016653	C44E4.4	88	32.295	Caenorhabditis_elegans
ENSSTOG00000008416	SSB	100	95.556	ENSCJAG00000045073	SSB	100	95.556	Callithrix_jacchus
ENSSTOG00000008416	SSB	100	94.828	ENSCAFG00000012418	SSB	100	94.828	Canis_familiaris
ENSSTOG00000008416	SSB	100	94.828	ENSCAFG00020002900	SSB	100	94.828	Canis_lupus_dingo
ENSSTOG00000008416	SSB	100	89.136	ENSCHIG00000022196	-	100	89.136	Capra_hircus
ENSSTOG00000008416	SSB	100	95.062	ENSCHIG00000022624	-	100	95.062	Capra_hircus
ENSSTOG00000008416	SSB	100	95.802	ENSTSYG00000000097	SSB	100	95.802	Carlito_syrichta
ENSSTOG00000008416	SSB	100	97.037	ENSCPOG00000003338	SSB	100	97.037	Cavia_porcellus
ENSSTOG00000008416	SSB	100	95.556	ENSCCAG00000035147	SSB	100	95.556	Cebus_capucinus
ENSSTOG00000008416	SSB	100	71.111	ENSCATG00000042909	-	100	71.111	Cercocebus_atys
ENSSTOG00000008416	SSB	100	73.580	ENSCATG00000036701	SSB	100	73.580	Cercocebus_atys
ENSSTOG00000008416	SSB	100	96.296	ENSCLAG00000015617	-	100	96.296	Chinchilla_lanigera
ENSSTOG00000008416	SSB	100	95.556	ENSCSAG00000015200	SSB	89	95.556	Chlorocebus_sabaeus
ENSSTOG00000008416	SSB	98	86.650	ENSCSAG00000018390	-	100	86.650	Chlorocebus_sabaeus
ENSSTOG00000008416	SSB	100	96.049	ENSCHOG00000007763	SSB	100	96.049	Choloepus_hoffmanni
ENSSTOG00000008416	SSB	100	78.484	ENSCPBG00000006519	SSB	100	79.218	Chrysemys_picta_bellii
ENSSTOG00000008416	SSB	100	95.556	ENSCANG00000027695	SSB	100	95.556	Colobus_angolensis_palliatus
ENSSTOG00000008416	SSB	98	74.687	ENSCANG00000028838	-	95	74.687	Colobus_angolensis_palliatus
ENSSTOG00000008416	SSB	100	80.741	ENSCANG00000033240	-	100	80.741	Colobus_angolensis_palliatus
ENSSTOG00000008416	SSB	100	79.756	ENSCGRG00001024831	Ssb	100	80.976	Cricetulus_griseus_chok1gshd
ENSSTOG00000008416	SSB	100	79.756	ENSCGRG00000005387	Ssb	100	80.976	Cricetulus_griseus_crigri
ENSSTOG00000008416	SSB	98	57.000	ENSCSEG00000011599	ssb	99	57.750	Cynoglossus_semilaevis
ENSSTOG00000008416	SSB	99	57.740	ENSCVAG00000021558	ssb	100	58.231	Cyprinodon_variegatus
ENSSTOG00000008416	SSB	98	57.463	ENSDARG00000029252	ssb	99	57.711	Danio_rerio
ENSSTOG00000008416	SSB	100	96.296	ENSDNOG00000013450	SSB	100	96.296	Dasypus_novemcinctus
ENSSTOG00000008416	SSB	100	84.672	ENSDORG00000005543	Ssb	100	84.672	Dipodomys_ordii
ENSSTOG00000008416	SSB	81	34.808	FBgn0011638	La	89	34.595	Drosophila_melanogaster
ENSSTOG00000008416	SSB	58	94.527	ENSETEG00000004614	-	61	94.527	Echinops_telfairi
ENSSTOG00000008416	SSB	96	47.692	ENSEBUG00000001237	ssb	96	48.593	Eptatretus_burgeri
ENSSTOG00000008416	SSB	100	96.049	ENSEASG00005022835	SSB	100	96.049	Equus_asinus_asinus
ENSSTOG00000008416	SSB	100	96.296	ENSECAG00000018495	SSB	100	96.296	Equus_caballus
ENSSTOG00000008416	SSB	82	88.889	ENSEEUG00000008077	SSB	86	88.889	Erinaceus_europaeus
ENSSTOG00000008416	SSB	98	58.955	ENSELUG00000020929	ssb	100	59.360	Esox_lucius
ENSSTOG00000008416	SSB	100	95.074	ENSFCAG00000011601	SSB	100	95.074	Felis_catus
ENSSTOG00000008416	SSB	100	75.369	ENSFALG00000000930	SSB	100	75.369	Ficedula_albicollis
ENSSTOG00000008416	SSB	100	95.802	ENSFDAG00000000598	SSB	100	95.802	Fukomys_damarensis
ENSSTOG00000008416	SSB	72	54.181	ENSFHEG00000003268	ssb	95	54.902	Fundulus_heteroclitus
ENSSTOG00000008416	SSB	97	54.342	ENSGMOG00000002664	ssb	99	55.087	Gadus_morhua
ENSSTOG00000008416	SSB	100	75.184	ENSGALG00000009677	SSB	100	75.184	Gallus_gallus
ENSSTOG00000008416	SSB	99	54.926	ENSGAFG00000002749	ssb	100	55.665	Gambusia_affinis
ENSSTOG00000008416	SSB	99	53.883	ENSGACG00000005107	ssb	100	53.883	Gasterosteus_aculeatus
ENSSTOG00000008416	SSB	100	78.240	ENSGAGG00000007807	SSB	100	78.484	Gopherus_agassizii
ENSSTOG00000008416	SSB	63	92.000	ENSGGOG00000023471	-	100	92.000	Gorilla_gorilla
ENSSTOG00000008416	SSB	100	79.012	ENSGGOG00000024891	-	100	79.012	Gorilla_gorilla
ENSSTOG00000008416	SSB	99	54.094	ENSHBUG00000006584	ssb	100	54.208	Haplochromis_burtoni
ENSSTOG00000008416	SSB	100	87.715	ENSHGLG00000004478	-	100	87.715	Heterocephalus_glaber_female
ENSSTOG00000008416	SSB	100	94.660	ENSHGLG00000017580	-	100	94.660	Heterocephalus_glaber_female
ENSSTOG00000008416	SSB	100	86.914	ENSHGLG00000005832	-	100	86.914	Heterocephalus_glaber_female
ENSSTOG00000008416	SSB	100	81.975	ENSHGLG00100008767	-	100	81.975	Heterocephalus_glaber_male
ENSSTOG00000008416	SSB	100	94.660	ENSHGLG00100003084	-	100	94.660	Heterocephalus_glaber_male
ENSSTOG00000008416	SSB	98	54.798	ENSHCOG00000019011	ssb	99	55.668	Hippocampus_comes
ENSSTOG00000008416	SSB	97	57.711	ENSIPUG00000003681	SSB	99	58.313	Ictalurus_punctatus
ENSSTOG00000008416	SSB	99	69.154	ENSJJAG00000016250	-	99	69.154	Jaculus_jaculus
ENSSTOG00000008416	SSB	100	81.087	ENSJJAG00000023158	-	100	81.087	Jaculus_jaculus
ENSSTOG00000008416	SSB	99	55.911	ENSKMAG00000017317	ssb	100	56.404	Kryptolebias_marmoratus
ENSSTOG00000008416	SSB	98	53.980	ENSLBEG00000017345	ssb	100	54.926	Labrus_bergylta
ENSSTOG00000008416	SSB	99	69.287	ENSLACG00000014056	SSB	99	69.779	Latimeria_chalumnae
ENSSTOG00000008416	SSB	98	66.833	ENSLOCG00000007933	ssb	99	67.332	Lepisosteus_oculatus
ENSSTOG00000008416	SSB	100	79.208	ENSLAFG00000028909	-	100	79.208	Loxodonta_africana
ENSSTOG00000008416	SSB	75	70.199	ENSLAFG00000026721	-	99	70.199	Loxodonta_africana
ENSSTOG00000008416	SSB	100	86.967	ENSLAFG00000000867	-	100	89.810	Loxodonta_africana
ENSSTOG00000008416	SSB	88	81.793	ENSMFAG00000041478	-	100	81.793	Macaca_fascicularis
ENSSTOG00000008416	SSB	100	95.802	ENSMFAG00000039066	SSB	100	95.802	Macaca_fascicularis
ENSSTOG00000008416	SSB	99	67.246	ENSMMUG00000039889	-	100	67.494	Macaca_mulatta
ENSSTOG00000008416	SSB	100	95.802	ENSMMUG00000023051	SSB	100	95.802	Macaca_mulatta
ENSSTOG00000008416	SSB	100	80.693	ENSMMUG00000011724	-	97	80.693	Macaca_mulatta
ENSSTOG00000008416	SSB	88	81.793	ENSMNEG00000034698	-	100	81.793	Macaca_nemestrina
ENSSTOG00000008416	SSB	100	83.171	ENSMNEG00000028321	SSB	85	100.000	Macaca_nemestrina
ENSSTOG00000008416	SSB	100	68.069	ENSMLEG00000042644	-	100	68.069	Mandrillus_leucophaeus
ENSSTOG00000008416	SSB	100	95.802	ENSMLEG00000035717	SSB	100	95.802	Mandrillus_leucophaeus
ENSSTOG00000008416	SSB	99	58.374	ENSMAMG00000004800	ssb	100	58.867	Mastacembelus_armatus
ENSSTOG00000008416	SSB	99	54.591	ENSMZEG00005005749	ssb	100	54.703	Maylandia_zebra
ENSSTOG00000008416	SSB	100	74.939	ENSMGAG00000010328	SSB	99	76.585	Meleagris_gallopavo
ENSSTOG00000008416	SSB	98	88.161	ENSMICG00000033304	-	98	87.629	Microcebus_murinus
ENSSTOG00000008416	SSB	99	96.526	ENSMICG00000028252	-	99	96.526	Microcebus_murinus
ENSSTOG00000008416	SSB	100	76.867	ENSMODG00000008227	-	100	79.036	Monodelphis_domestica
ENSSTOG00000008416	SSB	100	67.407	ENSMODG00000019271	-	100	61.614	Monodelphis_domestica
ENSSTOG00000008416	SSB	85	81.132	ENSMODG00000007027	-	99	81.132	Monodelphis_domestica
ENSSTOG00000008416	SSB	90	55.014	ENSMALG00000008045	ssb	90	58.886	Monopterus_albus
ENSSTOG00000008416	SSB	100	77.672	MGP_CAROLIEiJ_G0023629	-	100	92.935	Mus_caroli
ENSSTOG00000008416	SSB	100	76.960	ENSMUSG00000068882	Ssb	100	92.935	Mus_musculus
ENSSTOG00000008416	SSB	100	76.905	MGP_PahariEiJ_G0025081	-	100	92.935	Mus_pahari
ENSSTOG00000008416	SSB	100	76.960	MGP_SPRETEiJ_G0024551	Ssb	100	92.935	Mus_spretus
ENSSTOG00000008416	SSB	100	95.556	ENSMPUG00000000785	SSB	100	95.556	Mustela_putorius_furo
ENSSTOG00000008416	SSB	100	90.238	ENSMLUG00000016316	SSB	100	90.238	Myotis_lucifugus
ENSSTOG00000008416	SSB	99	55.087	ENSNBRG00000012661	ssb	100	55.198	Neolamprologus_brichardi
ENSSTOG00000008416	SSB	100	68.227	ENSNLEG00000028754	-	100	68.719	Nomascus_leucogenys
ENSSTOG00000008416	SSB	100	96.049	ENSNLEG00000004958	SSB	100	96.049	Nomascus_leucogenys
ENSSTOG00000008416	SSB	61	88.306	ENSMEUG00000001650	-	100	88.306	Notamacropus_eugenii
ENSSTOG00000008416	SSB	72	74.828	ENSOPRG00000008475	-	100	74.828	Ochotona_princeps
ENSSTOG00000008416	SSB	93	89.655	ENSODEG00000004202	-	100	89.655	Octodon_degus
ENSSTOG00000008416	SSB	99	54.094	ENSONIG00000008776	ssb	100	54.208	Oreochromis_niloticus
ENSSTOG00000008416	SSB	100	83.704	ENSOANG00000008543	SSB	100	83.704	Ornithorhynchus_anatinus
ENSSTOG00000008416	SSB	100	96.543	ENSOCUG00000010396	SSB	100	96.543	Oryctolagus_cuniculus
ENSSTOG00000008416	SSB	99	56.897	ENSORLG00000017208	ssb	100	57.882	Oryzias_latipes
ENSSTOG00000008416	SSB	99	57.389	ENSORLG00020022574	ssb	100	58.374	Oryzias_latipes_hni
ENSSTOG00000008416	SSB	99	56.897	ENSORLG00015016592	ssb	100	57.635	Oryzias_latipes_hsok
ENSSTOG00000008416	SSB	98	57.357	ENSOMEG00000003193	ssb	100	58.272	Oryzias_melastigma
ENSSTOG00000008416	SSB	100	89.336	ENSOGAG00000029768	SSB	100	89.336	Otolemur_garnettii
ENSSTOG00000008416	SSB	100	94.568	ENSOARG00000002906	SSB	100	94.568	Ovis_aries
ENSSTOG00000008416	SSB	100	78.025	ENSPPAG00000032427	-	100	87.597	Pan_paniscus
ENSSTOG00000008416	SSB	100	95.343	ENSPPAG00000042673	SSB	100	95.343	Pan_paniscus
ENSSTOG00000008416	SSB	97	75.127	ENSPPAG00000006189	-	96	79.032	Pan_paniscus
ENSSTOG00000008416	SSB	100	95.074	ENSPPRG00000006599	SSB	100	95.074	Panthera_pardus
ENSSTOG00000008416	SSB	100	94.828	ENSPTIG00000011021	SSB	97	94.828	Panthera_tigris_altaica
ENSSTOG00000008416	SSB	100	95.343	ENSPTRG00000012620	SSB	100	95.343	Pan_troglodytes
ENSSTOG00000008416	SSB	100	74.074	ENSPTRG00000042880	-	100	74.074	Pan_troglodytes
ENSSTOG00000008416	SSB	100	68.564	ENSPANG00000034126	-	100	69.059	Papio_anubis
ENSSTOG00000008416	SSB	98	65.915	ENSPANG00000031877	-	95	65.915	Papio_anubis
ENSSTOG00000008416	SSB	100	95.802	ENSPANG00000007440	SSB	100	95.802	Papio_anubis
ENSSTOG00000008416	SSB	98	61.845	ENSPKIG00000019325	ssb	99	62.315	Paramormyrops_kingsleyae
ENSSTOG00000008416	SSB	100	76.039	ENSPSIG00000002265	SSB	93	76.284	Pelodiscus_sinensis
ENSSTOG00000008416	SSB	84	55.043	ENSPMGG00000020075	ssb	91	55.331	Periophthalmus_magnuspinnatus
ENSSTOG00000008416	SSB	81	50.303	ENSPMAG00000002982	ssb	100	46.279	Petromyzon_marinus
ENSSTOG00000008416	SSB	100	83.005	ENSPCIG00000028591	-	100	83.005	Phascolarctos_cinereus
ENSSTOG00000008416	SSB	99	55.911	ENSPFOG00000009650	ssb	100	56.650	Poecilia_formosa
ENSSTOG00000008416	SSB	99	55.665	ENSPLAG00000020498	ssb	100	56.404	Poecilia_latipinna
ENSSTOG00000008416	SSB	99	55.911	ENSPMEG00000001051	ssb	100	56.404	Poecilia_mexicana
ENSSTOG00000008416	SSB	94	56.250	ENSPREG00000003708	ssb	99	57.031	Poecilia_reticulata
ENSSTOG00000008416	SSB	100	96.049	ENSPPYG00000012919	SSB	100	96.049	Pongo_abelii
ENSSTOG00000008416	SSB	95	90.862	ENSPCAG00000010276	SSB	100	90.862	Procavia_capensis
ENSSTOG00000008416	SSB	100	84.691	ENSPCOG00000023189	-	100	84.691	Propithecus_coquereli
ENSSTOG00000008416	SSB	100	92.593	ENSPCOG00000015741	-	100	92.593	Propithecus_coquereli
ENSSTOG00000008416	SSB	87	94.334	ENSPVAG00000006615	SSB	100	94.334	Pteropus_vampyrus
ENSSTOG00000008416	SSB	99	54.591	ENSPNYG00000006444	ssb	100	54.703	Pundamilia_nyererei
ENSSTOG00000008416	SSB	98	56.650	ENSPNAG00000011708	ssb	100	58.151	Pygocentrus_nattereri
ENSSTOG00000008416	SSB	100	78.622	ENSRNOG00000007998	Ssb	100	78.622	Rattus_norvegicus
ENSSTOG00000008416	SSB	100	79.167	ENSRNOG00000011606	AABR07061825.1	100	79.167	Rattus_norvegicus
ENSSTOG00000008416	SSB	100	69.458	ENSRBIG00000029918	-	100	69.458	Rhinopithecus_bieti
ENSSTOG00000008416	SSB	89	87.293	ENSRBIG00000041608	-	98	87.293	Rhinopithecus_bieti
ENSSTOG00000008416	SSB	100	78.537	ENSRBIG00000041972	SSB	88	100.000	Rhinopithecus_bieti
ENSSTOG00000008416	SSB	94	79.156	ENSRBIG00000041232	-	98	79.156	Rhinopithecus_bieti
ENSSTOG00000008416	SSB	98	80.303	ENSRROG00000031684	-	100	80.303	Rhinopithecus_roxellana
ENSSTOG00000008416	SSB	100	95.556	ENSRROG00000040346	SSB	100	95.556	Rhinopithecus_roxellana
ENSSTOG00000008416	SSB	98	85.750	ENSRROG00000034102	-	98	85.678	Rhinopithecus_roxellana
ENSSTOG00000008416	SSB	100	79.064	ENSRROG00000007149	-	100	79.064	Rhinopithecus_roxellana
ENSSTOG00000008416	SSB	100	96.049	ENSSBOG00000027204	SSB	100	96.049	Saimiri_boliviensis_boliviensis
ENSSTOG00000008416	SSB	100	83.251	ENSSHAG00000018062	SSB	100	83.251	Sarcophilus_harrisii
ENSSTOG00000008416	SSB	99	64.146	ENSSFOG00015000550	ssb	100	64.634	Scleropages_formosus
ENSSTOG00000008416	SSB	98	53.266	ENSSMAG00000013885	ssb	99	56.684	Scophthalmus_maximus
ENSSTOG00000008416	SSB	99	56.404	ENSSDUG00000020117	ssb	100	57.143	Seriola_dumerili
ENSSTOG00000008416	SSB	99	54.342	ENSSLDG00000002525	ssb	100	54.839	Seriola_lalandi_dorsalis
ENSSTOG00000008416	SSB	95	84.817	ENSSARG00000007747	SSB	100	84.817	Sorex_araneus
ENSSTOG00000008416	SSB	100	76.601	ENSSPUG00000012112	SSB	100	76.601	Sphenodon_punctatus
ENSSTOG00000008416	SSB	98	55.224	ENSSPAG00000005696	ssb	100	55.911	Stegastes_partitus
ENSSTOG00000008416	SSB	98	77.582	ENSSSCG00000015938	SSB	98	78.589	Sus_scrofa
ENSSTOG00000008416	SSB	100	75.000	ENSTGUG00000007942	SSB	100	75.000	Taeniopygia_guttata
ENSSTOG00000008416	SSB	99	56.931	ENSTRUG00000017839	ssb	100	57.531	Takifugu_rubripes
ENSSTOG00000008416	SSB	90	59.673	ENSTNIG00000000915	ssb	100	59.673	Tetraodon_nigroviridis
ENSSTOG00000008416	SSB	83	100.000	ENSTBEG00000009056	SSB	82	100.000	Tupaia_belangeri
ENSSTOG00000008416	SSB	100	94.335	ENSTTRG00000002152	SSB	100	94.335	Tursiops_truncatus
ENSSTOG00000008416	SSB	93	96.286	ENSUAMG00000027833	SSB	99	96.286	Ursus_americanus
ENSSTOG00000008416	SSB	100	95.567	ENSUMAG00000013907	SSB	100	95.567	Ursus_maritimus
ENSSTOG00000008416	SSB	100	94.568	ENSVPAG00000007183	SSB	100	94.568	Vicugna_pacos
ENSSTOG00000008416	SSB	100	94.828	ENSVVUG00000016573	SSB	78	94.828	Vulpes_vulpes
ENSSTOG00000008416	SSB	100	59.346	ENSXETG00000025402	ssb	100	60.748	Xenopus_tropicalis
ENSSTOG00000008416	SSB	94	54.047	ENSXCOG00000019109	ssb	93	61.719	Xiphophorus_couchianus
ENSSTOG00000008416	SSB	99	55.172	ENSXMAG00000004888	ssb	100	55.911	Xiphophorus_maculatus