EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSTOG00000008596 (Gene tree)
Gene ID: 101965073
Gene Symbol: -
Alias: -
Full Name: La ribonucleoprotein domain family member 1B
Gene Type: protein_coding
Species: Ictidomys_tridecemlineatus
Status: putative
Strand: Minus strand
Length: 90055 bases
Position: chrJH393452.1:2652054-2742108
Accession: 101965073
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSTOP00000031930	La	PF05383.17	3.5e-22	1	1
ENSSTOP00000028394	La	PF05383.17	7e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSTOT00000008597	-	3764	XM_005335499	ENSSTOP00000007705	14 (aa)	XP_005335556	I3MBX5
ENSSTOT00000038871	-	2023	XM_013362970	ENSSTOP00000031930	336 (aa)	XP_013218424	A0A287DED8
ENSSTOT00000031078	-	870	-	ENSSTOP00000028394	289 (aa)	-	A0A287D4E1

Gene Model

Click here to download ENSSTOG00000008596's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSTOG00000008596's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSTOG00000008596	-	90	78.462	ENSSTOG00000033183	-	97	76.190
ENSSTOG00000008596	-	99	82.831	ENSSTOG00000021917	-	94	82.831
ENSSTOG00000008596	-	96	79.193	ENSSTOG00000034510	-	87	79.193

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSTOG00000008596	-	100	88.988	ENSG00000138709	LARP1B	100	88.988	Homo_sapiens
ENSSTOG00000008596	-	100	90.179	ENSAMEG00000002748	LARP1B	100	90.179	Ailuropoda_melanoleuca
ENSSTOG00000008596	-	99	76.807	ENSANAG00000034618	LARP1B	96	76.807	Aotus_nancymaae
ENSSTOG00000008596	-	98	88.822	ENSBTAG00000012135	LARP1B	63	88.822	Bos_taurus
ENSSTOG00000008596	-	100	89.286	ENSCJAG00000003338	LARP1B	100	89.286	Callithrix_jacchus
ENSSTOG00000008596	-	100	90.476	ENSCAFG00020018899	LARP1B	100	90.476	Canis_lupus_dingo
ENSSTOG00000008596	-	100	88.427	ENSCHIG00000023144	LARP1B	100	88.427	Capra_hircus
ENSSTOG00000008596	-	99	84.028	ENSTSYG00000002037	-	99	84.028	Carlito_syrichta
ENSSTOG00000008596	-	76	95.536	ENSCPOG00000034668	-	93	95.536	Cavia_porcellus
ENSSTOG00000008596	-	99	90.149	ENSCCAG00000021948	LARP1B	99	90.149	Cebus_capucinus
ENSSTOG00000008596	-	100	87.798	ENSCATG00000013541	LARP1B	100	87.798	Cercocebus_atys
ENSSTOG00000008596	-	100	86.310	ENSCLAG00000006448	-	100	86.607	Chinchilla_lanigera
ENSSTOG00000008596	-	100	88.581	ENSCANG00000026958	LARP1B	100	88.581	Colobus_angolensis_palliatus
ENSSTOG00000008596	-	100	90.311	ENSCGRG00001004660	-	100	90.311	Cricetulus_griseus_chok1gshd
ENSSTOG00000008596	-	100	89.965	ENSCGRG00000001914	-	100	89.965	Cricetulus_griseus_crigri
ENSSTOG00000008596	-	98	87.879	ENSDNOG00000018765	-	64	87.879	Dasypus_novemcinctus
ENSSTOG00000008596	-	99	90.972	ENSEASG00005018106	LARP1B	99	90.972	Equus_asinus_asinus
ENSSTOG00000008596	-	100	89.583	ENSFCAG00000014650	-	100	89.583	Felis_catus
ENSSTOG00000008596	-	100	88.988	ENSGGOG00000015900	LARP1B	100	88.988	Gorilla_gorilla
ENSSTOG00000008596	-	98	74.848	ENSHGLG00000013922	-	96	74.545	Heterocephalus_glaber_female
ENSSTOG00000008596	-	100	84.071	ENSHGLG00000006728	-	99	85.959	Heterocephalus_glaber_female
ENSSTOG00000008596	-	100	84.821	ENSHGLG00100014041	-	96	85.560	Heterocephalus_glaber_male
ENSSTOG00000008596	-	98	74.848	ENSHGLG00100016491	-	96	74.545	Heterocephalus_glaber_male
ENSSTOG00000008596	-	99	86.806	ENSJJAG00000022360	Larp1b	99	86.806	Jaculus_jaculus
ENSSTOG00000008596	-	98	68.072	ENSLACG00000015247	LARP1B	85	65.165	Latimeria_chalumnae
ENSSTOG00000008596	-	99	89.911	ENSLAFG00000008473	-	99	89.911	Loxodonta_africana
ENSSTOG00000008596	-	100	65.744	ENSMFAG00000003306	-	94	87.586	Macaca_fascicularis
ENSSTOG00000008596	-	100	89.583	ENSMFAG00000002218	LARP1B	100	89.583	Macaca_fascicularis
ENSSTOG00000008596	-	100	89.583	ENSMMUG00000021347	LARP1B	100	89.583	Macaca_mulatta
ENSSTOG00000008596	-	75	88.811	ENSMNEG00000027747	-	89	88.811	Macaca_nemestrina
ENSSTOG00000008596	-	83	52.282	ENSMZEG00005002545	larp1b	53	51.673	Maylandia_zebra
ENSSTOG00000008596	-	100	89.273	ENSMAUG00000007879	-	100	89.273	Mesocricetus_auratus
ENSSTOG00000008596	-	97	68.807	ENSMICG00000028052	-	63	68.196	Microcebus_murinus
ENSSTOG00000008596	-	100	91.369	ENSMICG00000036111	LARP1B	100	91.369	Microcebus_murinus
ENSSTOG00000008596	-	98	81.533	ENSMICG00000037883	-	88	81.533	Microcebus_murinus
ENSSTOG00000008596	-	79	87.879	ENSMOCG00000001490	Larp1b	95	87.879	Microtus_ochrogaster
ENSSTOG00000008596	-	100	88.581	MGP_CAROLIEiJ_G0024962	Larp1b	100	88.581	Mus_caroli
ENSSTOG00000008596	-	100	89.619	ENSMUSG00000025762	Larp1b	100	89.619	Mus_musculus
ENSSTOG00000008596	-	100	89.273	MGP_PahariEiJ_G0026403	Larp1b	100	89.273	Mus_pahari
ENSSTOG00000008596	-	100	89.619	MGP_SPRETEiJ_G0025897	Larp1b	100	89.619	Mus_spretus
ENSSTOG00000008596	-	100	88.690	ENSNLEG00000013819	LARP1B	100	88.690	Nomascus_leucogenys
ENSSTOG00000008596	-	100	84.226	ENSODEG00000001292	-	100	84.524	Octodon_degus
ENSSTOG00000008596	-	100	88.690	ENSPPAG00000030439	LARP1B	100	88.690	Pan_paniscus
ENSSTOG00000008596	-	100	89.583	ENSPPRG00000002743	-	100	89.583	Panthera_pardus
ENSSTOG00000008596	-	100	89.583	ENSPTIG00000011225	LARP1B	100	89.583	Panthera_tigris_altaica
ENSSTOG00000008596	-	100	88.988	ENSPTRG00000016437	LARP1B	100	88.988	Pan_troglodytes
ENSSTOG00000008596	-	100	89.286	ENSPANG00000012488	LARP1B	100	89.286	Papio_anubis
ENSSTOG00000008596	-	99	82.143	ENSPCIG00000026516	LARP1B	87	82.477	Phascolarctos_cinereus
ENSSTOG00000008596	-	97	49.300	ENSPFOG00000022837	-	51	48.739	Poecilia_formosa
ENSSTOG00000008596	-	78	57.080	ENSPREG00000005955	-	89	53.169	Poecilia_reticulata
ENSSTOG00000008596	-	100	90.179	ENSPCOG00000021874	LARP1B	100	90.179	Propithecus_coquereli
ENSSTOG00000008596	-	100	91.369	ENSRNOG00000038366	Larp1b	100	91.369	Rattus_norvegicus
ENSSTOG00000008596	-	100	80.952	ENSRBIG00000038568	-	92	80.952	Rhinopithecus_bieti
ENSSTOG00000008596	-	100	87.202	ENSRBIG00000039982	-	100	86.310	Rhinopithecus_bieti
ENSSTOG00000008596	-	100	81.379	ENSRROG00000038525	-	96	81.379	Rhinopithecus_roxellana
ENSSTOG00000008596	-	100	89.583	ENSRROG00000030771	LARP1B	100	89.583	Rhinopithecus_roxellana
ENSSTOG00000008596	-	99	55.556	ENSSSCG00000040491	-	99	77.778	Sus_scrofa
ENSSTOG00000008596	-	98	88.485	ENSSSCG00000034280	LARP1B	63	88.485	Sus_scrofa
ENSSTOG00000008596	-	100	83.036	ENSUAMG00000016938	-	91	95.858	Ursus_americanus
ENSSTOG00000008596	-	98	90.303	ENSVVUG00000011307	LARP1B	65	90.303	Vulpes_vulpes