EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSTOG00000008735 (Gene tree)
Gene ID: 101975994
Gene Symbol: -
Alias: -
Full Name: pre-mRNA processing factor 18
Gene Type: protein_coding
Species: Ictidomys_tridecemlineatus
Status: putative
Strand: Plus strand
Length: 36941 bases
Position: chrJH393423.1:364462-401402
Accession: 101975994
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSTOP00000030659	PRP4	PF08799.11	1e-13	1	1
ENSSTOP00000007825	PRP4	PF08799.11	1.1e-13	1	1
ENSSTOP00000030659	Prp18	PF02840.15	4.7e-63	1	1
ENSSTOP00000007825	Prp18	PF02840.15	5.2e-63	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSTOT00000008730	-	1229	-	ENSSTOP00000007825	351 (aa)	-	I3MC66
ENSSTOT00000034062	-	3445	XM_005334269	ENSSTOP00000030659	342 (aa)	XP_005334326	A0A287DAV3

Gene Model

Click here to download ENSSTOG00000008735's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSTOG00000008735's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSTOG00000008735	-	100	98.246	ENSG00000165630	PRPF18	100	98.246	Homo_sapiens
ENSSTOG00000008735	-	100	84.795	ENSAPOG00000024177	prpf18	100	84.795	Acanthochromis_polyacanthus
ENSSTOG00000008735	-	100	97.661	ENSAMEG00000013591	-	100	97.661	Ailuropoda_melanoleuca
ENSSTOG00000008735	-	100	83.626	ENSACIG00000001186	prpf18	100	83.626	Amphilophus_citrinellus
ENSSTOG00000008735	-	98	84.776	ENSAOCG00000006572	prpf18	94	83.090	Amphiprion_ocellaris
ENSSTOG00000008735	-	100	85.088	ENSAPEG00000004564	prpf18	100	85.088	Amphiprion_percula
ENSSTOG00000008735	-	100	83.626	ENSATEG00000000303	prpf18	100	83.626	Anabas_testudineus
ENSSTOG00000008735	-	99	90.882	ENSAPLG00000003387	-	99	90.882	Anas_platyrhynchos
ENSSTOG00000008735	-	100	90.988	ENSACAG00000000818	-	100	90.988	Anolis_carolinensis
ENSSTOG00000008735	-	100	97.661	ENSANAG00000037445	-	100	97.661	Aotus_nancymaae
ENSSTOG00000008735	-	100	84.503	ENSACLG00000026296	prpf18	100	84.503	Astatotilapia_calliptera
ENSSTOG00000008735	-	100	83.476	ENSAMXG00000012848	prpf18	100	83.476	Astyanax_mexicanus
ENSSTOG00000008735	-	100	97.368	ENSBTAG00000017244	PRPF18	100	97.368	Bos_taurus
ENSSTOG00000008735	-	98	39.205	WBGene00009320	F32B6.3	97	39.205	Caenorhabditis_elegans
ENSSTOG00000008735	-	100	97.661	ENSCJAG00000009432	-	100	97.661	Callithrix_jacchus
ENSSTOG00000008735	-	100	97.661	ENSCAFG00000004735	-	100	97.661	Canis_familiaris
ENSSTOG00000008735	-	100	97.661	ENSCAFG00020007712	-	100	97.661	Canis_lupus_dingo
ENSSTOG00000008735	-	100	97.368	ENSCHIG00000000499	-	100	97.368	Capra_hircus
ENSSTOG00000008735	-	100	97.661	ENSTSYG00000003517	-	100	97.661	Carlito_syrichta
ENSSTOG00000008735	-	100	98.291	ENSCPOG00000021069	-	100	98.291	Cavia_porcellus
ENSSTOG00000008735	-	100	97.661	ENSCCAG00000036822	-	100	97.661	Cebus_capucinus
ENSSTOG00000008735	-	100	87.135	ENSCATG00000016633	-	100	87.135	Cercocebus_atys
ENSSTOG00000008735	-	100	97.436	ENSCLAG00000011770	-	100	97.436	Chinchilla_lanigera
ENSSTOG00000008735	-	100	98.006	ENSCSAG00000013109	-	100	98.006	Chlorocebus_sabaeus
ENSSTOG00000008735	-	100	88.764	ENSCPBG00000003100	-	100	89.326	Chrysemys_picta_bellii
ENSSTOG00000008735	-	99	54.118	ENSCING00000020481	-	97	54.118	Ciona_intestinalis
ENSSTOG00000008735	-	99	53.757	ENSCSAVG00000010546	-	99	53.779	Ciona_savignyi
ENSSTOG00000008735	-	100	97.953	ENSCANG00000034900	-	100	97.953	Colobus_angolensis_palliatus
ENSSTOG00000008735	-	100	97.661	ENSCGRG00001023665	Prpf18	100	97.661	Cricetulus_griseus_chok1gshd
ENSSTOG00000008735	-	100	97.661	ENSCGRG00000014690	Prpf18	100	97.661	Cricetulus_griseus_crigri
ENSSTOG00000008735	-	100	82.456	ENSCSEG00000005536	prpf18	99	82.456	Cynoglossus_semilaevis
ENSSTOG00000008735	-	100	83.626	ENSCVAG00000012401	prpf18	100	83.626	Cyprinodon_variegatus
ENSSTOG00000008735	-	100	84.211	ENSDARG00000058306	prpf18	100	84.211	Danio_rerio
ENSSTOG00000008735	-	100	97.076	ENSDNOG00000035607	-	100	97.076	Dasypus_novemcinctus
ENSSTOG00000008735	-	100	97.368	ENSDORG00000000858	Prpf18	100	97.368	Dipodomys_ordii
ENSSTOG00000008735	-	99	51.917	FBgn0027784	Prp18	98	51.622	Drosophila_melanogaster
ENSSTOG00000008735	-	100	86.550	ENSETEG00000015060	-	100	86.550	Echinops_telfairi
ENSSTOG00000008735	-	100	67.147	ENSEBUG00000016502	prpf18	99	66.282	Eptatretus_burgeri
ENSSTOG00000008735	-	100	97.953	ENSEASG00005019373	-	100	97.953	Equus_asinus_asinus
ENSSTOG00000008735	-	100	97.953	ENSECAG00000006997	PRPF18	100	97.953	Equus_caballus
ENSSTOG00000008735	-	92	61.392	ENSEEUG00000001171	-	100	61.392	Erinaceus_europaeus
ENSSTOG00000008735	-	100	81.633	ENSELUG00000022190	prpf18	100	81.633	Esox_lucius
ENSSTOG00000008735	-	100	97.368	ENSFCAG00000004436	-	100	97.368	Felis_catus
ENSSTOG00000008735	-	93	90.462	ENSFALG00000001912	-	97	90.462	Ficedula_albicollis
ENSSTOG00000008735	-	99	63.768	ENSFDAG00000010713	-	97	63.768	Fukomys_damarensis
ENSSTOG00000008735	-	94	98.438	ENSFDAG00000014026	-	100	98.438	Fukomys_damarensis
ENSSTOG00000008735	-	80	89.011	ENSFHEG00000020125	prpf18	98	89.139	Fundulus_heteroclitus
ENSSTOG00000008735	-	99	78.592	ENSGMOG00000012210	prpf18	99	78.592	Gadus_morhua
ENSSTOG00000008735	-	100	91.228	ENSGALG00000043593	-	100	91.228	Gallus_gallus
ENSSTOG00000008735	-	100	83.041	ENSGAFG00000006034	prpf18	100	83.041	Gambusia_affinis
ENSSTOG00000008735	-	100	80.409	ENSGACG00000012232	prpf18	100	80.409	Gasterosteus_aculeatus
ENSSTOG00000008735	-	100	92.398	ENSGAGG00000016878	-	100	92.398	Gopherus_agassizii
ENSSTOG00000008735	-	93	97.846	ENSGGOG00000025188	-	96	98.101	Gorilla_gorilla
ENSSTOG00000008735	-	100	84.503	ENSHBUG00000010264	prpf18	100	84.503	Haplochromis_burtoni
ENSSTOG00000008735	-	100	97.661	ENSHGLG00000018534	PRPF18	100	97.661	Heterocephalus_glaber_female
ENSSTOG00000008735	-	94	98.750	ENSHGLG00100012161	-	98	98.750	Heterocephalus_glaber_male
ENSSTOG00000008735	-	100	83.918	ENSHCOG00000015987	prpf18	100	83.918	Hippocampus_comes
ENSSTOG00000008735	-	100	81.303	ENSIPUG00000007432	prpf18	100	82.153	Ictalurus_punctatus
ENSSTOG00000008735	-	100	71.470	ENSJJAG00000015191	-	100	71.470	Jaculus_jaculus
ENSSTOG00000008735	-	100	98.246	ENSJJAG00000024041	-	100	98.246	Jaculus_jaculus
ENSSTOG00000008735	-	100	82.456	ENSKMAG00000012124	prpf18	100	82.456	Kryptolebias_marmoratus
ENSSTOG00000008735	-	95	85.494	ENSLBEG00000028466	prpf18	95	85.494	Labrus_bergylta
ENSSTOG00000008735	-	100	86.257	ENSLACG00000009885	prpf18	100	86.257	Latimeria_chalumnae
ENSSTOG00000008735	-	100	89.766	ENSLOCG00000016736	prpf18	100	89.766	Lepisosteus_oculatus
ENSSTOG00000008735	-	100	98.246	ENSLAFG00000007753	-	100	98.246	Loxodonta_africana
ENSSTOG00000008735	-	100	98.246	ENSMFAG00000000540	-	100	98.246	Macaca_fascicularis
ENSSTOG00000008735	-	100	98.246	ENSMMUG00000015071	PRPF18	100	98.246	Macaca_mulatta
ENSSTOG00000008735	-	100	98.246	ENSMNEG00000024679	-	100	98.246	Macaca_nemestrina
ENSSTOG00000008735	-	100	83.041	ENSMLEG00000031715	-	100	83.041	Mandrillus_leucophaeus
ENSSTOG00000008735	-	100	83.041	ENSMAMG00000006610	prpf18	100	83.041	Mastacembelus_armatus
ENSSTOG00000008735	-	100	84.503	ENSMZEG00005019392	prpf18	100	84.503	Maylandia_zebra
ENSSTOG00000008735	-	100	91.228	ENSMGAG00000005023	-	100	91.228	Meleagris_gallopavo
ENSSTOG00000008735	-	100	97.953	ENSMICG00000006572	-	100	97.953	Microcebus_murinus
ENSSTOG00000008735	-	100	98.246	ENSMOCG00000021468	Prpf18	100	98.246	Microtus_ochrogaster
ENSSTOG00000008735	-	100	82.456	ENSMMOG00000013012	prpf18	100	82.456	Mola_mola
ENSSTOG00000008735	-	96	91.716	ENSMODG00000016902	-	92	91.716	Monodelphis_domestica
ENSSTOG00000008735	-	100	84.211	ENSMODG00000024043	-	100	84.211	Monodelphis_domestica
ENSSTOG00000008735	-	100	78.000	ENSMALG00000005486	prpf18	100	78.286	Monopterus_albus
ENSSTOG00000008735	-	100	97.661	MGP_CAROLIEiJ_G0023143	Prpf18	100	100.000	Mus_caroli
ENSSTOG00000008735	-	100	97.368	ENSMUSG00000039449	Prpf18	100	100.000	Mus_musculus
ENSSTOG00000008735	-	100	97.953	MGP_PahariEiJ_G0019203	Prpf18	100	100.000	Mus_pahari
ENSSTOG00000008735	-	100	97.368	MGP_SPRETEiJ_G0024061	Prpf18	100	100.000	Mus_spretus
ENSSTOG00000008735	-	100	97.368	ENSMPUG00000000938	-	100	97.368	Mustela_putorius_furo
ENSSTOG00000008735	-	100	97.368	ENSMLUG00000009200	-	100	97.368	Myotis_lucifugus
ENSSTOG00000008735	-	67	91.739	ENSNGAG00000023550	-	82	91.739	Nannospalax_galili
ENSSTOG00000008735	-	100	97.661	ENSNGAG00000012500	-	100	97.661	Nannospalax_galili
ENSSTOG00000008735	-	100	84.503	ENSNBRG00000001778	prpf18	100	84.503	Neolamprologus_brichardi
ENSSTOG00000008735	-	100	98.246	ENSNLEG00000012186	-	100	98.246	Nomascus_leucogenys
ENSSTOG00000008735	-	76	79.537	ENSMEUG00000005032	-	75	79.537	Notamacropus_eugenii
ENSSTOG00000008735	-	77	80.377	ENSOPRG00000002153	-	100	80.377	Ochotona_princeps
ENSSTOG00000008735	-	100	97.368	ENSODEG00000003770	-	100	97.368	Octodon_degus
ENSSTOG00000008735	-	98	83.881	ENSONIG00000014854	prpf18	96	83.881	Oreochromis_niloticus
ENSSTOG00000008735	-	100	93.275	ENSOANG00000015404	-	100	93.275	Ornithorhynchus_anatinus
ENSSTOG00000008735	-	100	97.953	ENSOCUG00000027756	-	96	97.554	Oryctolagus_cuniculus
ENSSTOG00000008735	-	100	82.336	ENSORLG00000010293	prpf18	100	82.336	Oryzias_latipes
ENSSTOG00000008735	-	100	83.918	ENSORLG00020001530	prpf18	100	83.918	Oryzias_latipes_hni
ENSSTOG00000008735	-	100	83.626	ENSORLG00015013705	prpf18	100	83.626	Oryzias_latipes_hsok
ENSSTOG00000008735	-	100	84.795	ENSOMEG00000009167	prpf18	100	84.795	Oryzias_melastigma
ENSSTOG00000008735	-	100	97.076	ENSOGAG00000007294	-	100	97.076	Otolemur_garnettii
ENSSTOG00000008735	-	100	97.151	ENSOARG00000006243	-	100	97.151	Ovis_aries
ENSSTOG00000008735	-	100	98.246	ENSPPAG00000041959	-	100	98.246	Pan_paniscus
ENSSTOG00000008735	-	100	97.368	ENSPPRG00000000107	-	100	97.368	Panthera_pardus
ENSSTOG00000008735	-	100	97.076	ENSPTIG00000021094	-	100	97.076	Panthera_tigris_altaica
ENSSTOG00000008735	-	100	98.246	ENSPTRG00000002306	PRPF18	100	98.246	Pan_troglodytes
ENSSTOG00000008735	-	100	97.953	ENSPANG00000023346	-	100	97.953	Papio_anubis
ENSSTOG00000008735	-	86	98.113	ENSPKIG00000014128	prpf18	96	82.621	Paramormyrops_kingsleyae
ENSSTOG00000008735	-	100	92.398	ENSPSIG00000016064	-	100	92.398	Pelodiscus_sinensis
ENSSTOG00000008735	-	100	78.070	ENSPMGG00000016486	prpf18	100	78.070	Periophthalmus_magnuspinnatus
ENSSTOG00000008735	-	100	97.953	ENSPEMG00000013704	Prpf18	100	97.953	Peromyscus_maniculatus_bairdii
ENSSTOG00000008735	-	100	73.121	ENSPMAG00000000204	prpf18	100	73.121	Petromyzon_marinus
ENSSTOG00000008735	-	93	95.077	ENSPCIG00000012963	-	99	95.570	Phascolarctos_cinereus
ENSSTOG00000008735	-	100	81.766	ENSPFOG00000017611	prpf18	100	81.766	Poecilia_formosa
ENSSTOG00000008735	-	100	83.333	ENSPLAG00000000369	prpf18	100	83.333	Poecilia_latipinna
ENSSTOG00000008735	-	100	83.333	ENSPMEG00000005183	prpf18	100	83.333	Poecilia_mexicana
ENSSTOG00000008735	-	100	82.749	ENSPREG00000015232	prpf18	100	82.749	Poecilia_reticulata
ENSSTOG00000008735	-	100	97.953	ENSPPYG00000002101	PRPF18	100	97.953	Pongo_abelii
ENSSTOG00000008735	-	100	80.117	ENSPCAG00000010833	-	100	80.117	Procavia_capensis
ENSSTOG00000008735	-	100	91.228	ENSPCOG00000013057	-	100	91.228	Propithecus_coquereli
ENSSTOG00000008735	-	100	60.234	ENSPVAG00000002947	-	100	60.234	Pteropus_vampyrus
ENSSTOG00000008735	-	100	84.503	ENSPNYG00000003554	prpf18	100	84.503	Pundamilia_nyererei
ENSSTOG00000008735	-	100	84.046	ENSPNAG00000023151	prpf18	100	84.046	Pygocentrus_nattereri
ENSSTOG00000008735	-	100	97.076	ENSRNOG00000018396	Prpf18	100	97.076	Rattus_norvegicus
ENSSTOG00000008735	-	100	97.661	ENSRBIG00000028028	-	100	97.661	Rhinopithecus_bieti
ENSSTOG00000008735	-	100	97.953	ENSRROG00000040695	-	100	97.953	Rhinopithecus_roxellana
ENSSTOG00000008735	-	100	97.661	ENSSBOG00000034482	-	100	97.661	Saimiri_boliviensis_boliviensis
ENSSTOG00000008735	-	100	76.316	ENSSHAG00000009669	-	100	76.316	Sarcophilus_harrisii
ENSSTOG00000008735	-	100	95.614	ENSSHAG00000016463	-	100	95.614	Sarcophilus_harrisii
ENSSTOG00000008735	-	77	44.528	ENSSFOG00015021154	-	89	48.927	Scleropages_formosus
ENSSTOG00000008735	-	98	82.319	ENSSFOG00015022118	prpf18	100	76.945	Scleropages_formosus
ENSSTOG00000008735	-	100	82.456	ENSSMAG00000005308	prpf18	100	82.456	Scophthalmus_maximus
ENSSTOG00000008735	-	100	84.503	ENSSDUG00000015428	prpf18	100	84.503	Seriola_dumerili
ENSSTOG00000008735	-	100	84.503	ENSSLDG00000023989	prpf18	100	84.503	Seriola_lalandi_dorsalis
ENSSTOG00000008735	-	100	67.544	ENSSARG00000005307	-	100	67.544	Sorex_araneus
ENSSTOG00000008735	-	100	91.813	ENSSPUG00000002619	-	100	91.813	Sphenodon_punctatus
ENSSTOG00000008735	-	100	83.918	ENSSPAG00000019502	prpf18	100	83.918	Stegastes_partitus
ENSSTOG00000008735	-	100	97.661	ENSSSCG00000026354	-	100	97.661	Sus_scrofa
ENSSTOG00000008735	-	100	91.813	ENSTGUG00000002286	-	100	91.813	Taeniopygia_guttata
ENSSTOG00000008735	-	100	82.164	ENSTRUG00000011278	prpf18	100	82.164	Takifugu_rubripes
ENSSTOG00000008735	-	100	81.871	ENSTNIG00000000911	prpf18	100	81.871	Tetraodon_nigroviridis
ENSSTOG00000008735	-	80	100.000	ENSTBEG00000013011	-	79	100.000	Tupaia_belangeri
ENSSTOG00000008735	-	100	97.953	ENSTTRG00000011117	PRPF18	100	97.953	Tursiops_truncatus
ENSSTOG00000008735	-	95	95.692	ENSUAMG00000001815	-	94	95.692	Ursus_americanus
ENSSTOG00000008735	-	100	92.690	ENSUMAG00000012329	-	100	92.690	Ursus_maritimus
ENSSTOG00000008735	-	100	92.105	ENSVPAG00000011486	-	100	92.105	Vicugna_pacos
ENSSTOG00000008735	-	100	97.661	ENSVVUG00000005453	-	100	97.661	Vulpes_vulpes
ENSSTOG00000008735	-	100	79.420	ENSXETG00000024057	prpf18	100	79.420	Xenopus_tropicalis
ENSSTOG00000008735	-	100	82.558	ENSXCOG00000020414	prpf18	100	82.558	Xiphophorus_couchianus
ENSSTOG00000008735	-	100	83.041	ENSXMAG00000004713	prpf18	91	83.041	Xiphophorus_maculatus