EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSTOG00000008922 (Gene tree)
Gene ID: 101973353
Gene Symbol: DDX42
Alias: RHELP|RNAHP|SF3B8|SF3b125
Full Name: DEAD-box helicase 42
Gene Type: protein_coding
Species: Ictidomys_tridecemlineatus
Status: putative
Strand: Plus strand
Length: 35443 bases
Position: chrJH393351.1:4429657-4465099
Accession: 101973353
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSTOP00000008002	ResIII	PF04851.15	5.5e-07	1	1
ENSSTOP00000029270	ResIII	PF04851.15	5.6e-07	1	1
ENSSTOP00000008002	DEAD	PF00270.29	5.5e-50	1	1
ENSSTOP00000029270	DEAD	PF00270.29	5.6e-50	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSTOT00000008929	DDX42-202	2799	-	ENSSTOP00000008002	932 (aa)	-	I3MCL0
ENSSTOT00000033811	DDX42-201	6340	XM_005328202	ENSSTOP00000029270	937 (aa)	XP_005328259	A0A287D6V3

Gene Model

Click here to download ENSSTOG00000008922's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSTOG00000008922's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSTOG00000008922	DDX42	58	38.214	ENSSTOG00000012526	DDX5	78	40.741
ENSSTOG00000008922	DDX42	53	43.452	ENSSTOG00000025564	DDX46	57	43.254

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSTOG00000008922	DDX42	100	96.706	ENSG00000198231	DDX42	100	100.000	Homo_sapiens
ENSSTOG00000008922	DDX42	90	75.729	ENSAPOG00000017675	ddx42	99	74.053	Acanthochromis_polyacanthus
ENSSTOG00000008922	DDX42	100	97.439	ENSAMEG00000003200	DDX42	100	97.439	Ailuropoda_melanoleuca
ENSSTOG00000008922	DDX42	85	71.089	ENSACIG00000007376	ddx42	99	71.679	Amphilophus_citrinellus
ENSSTOG00000008922	DDX42	90	76.616	ENSAOCG00000003520	ddx42	99	72.775	Amphiprion_ocellaris
ENSSTOG00000008922	DDX42	90	76.678	ENSAPEG00000000984	ddx42	99	72.872	Amphiprion_percula
ENSSTOG00000008922	DDX42	99	71.987	ENSATEG00000022920	ddx42	99	73.383	Anabas_testudineus
ENSSTOG00000008922	DDX42	100	84.388	ENSAPLG00000010544	DDX42	100	85.053	Anas_platyrhynchos
ENSSTOG00000008922	DDX42	100	84.395	ENSACAG00000003994	DDX42	99	84.836	Anolis_carolinensis
ENSSTOG00000008922	DDX42	100	96.798	ENSANAG00000035693	DDX42	100	96.798	Aotus_nancymaae
ENSSTOG00000008922	DDX42	90	76.325	ENSACLG00000025113	ddx42	99	72.881	Astatotilapia_calliptera
ENSSTOG00000008922	DDX42	78	81.063	ENSAMXG00000011435	ddx42	99	70.137	Astyanax_mexicanus
ENSSTOG00000008922	DDX42	100	94.883	ENSBTAG00000021058	DDX42	100	95.197	Bos_taurus
ENSSTOG00000008922	DDX42	64	52.673	WBGene00008119	C46F11.4	78	52.895	Caenorhabditis_elegans
ENSSTOG00000008922	DDX42	100	97.118	ENSCJAG00000019649	DDX42	99	98.957	Callithrix_jacchus
ENSSTOG00000008922	DDX42	100	97.225	ENSCAFG00000012818	DDX42	100	97.225	Canis_familiaris
ENSSTOG00000008922	DDX42	100	97.332	ENSCAFG00020026631	DDX42	100	97.332	Canis_lupus_dingo
ENSSTOG00000008922	DDX42	100	95.643	ENSCHIG00000014431	DDX42	100	95.855	Capra_hircus
ENSSTOG00000008922	DDX42	100	95.629	ENSTSYG00000001380	DDX42	100	95.629	Carlito_syrichta
ENSSTOG00000008922	DDX42	73	76.106	ENSCAPG00000013621	DDX42	94	76.106	Cavia_aperea
ENSSTOG00000008922	DDX42	100	96.785	ENSCPOG00000005633	DDX42	100	96.785	Cavia_porcellus
ENSSTOG00000008922	DDX42	100	91.569	ENSCCAG00000020612	DDX42	100	96.433	Cebus_capucinus
ENSSTOG00000008922	DDX42	100	96.493	ENSCATG00000030490	DDX42	100	96.493	Cercocebus_atys
ENSSTOG00000008922	DDX42	100	97.747	ENSCLAG00000003497	DDX42	100	97.747	Chinchilla_lanigera
ENSSTOG00000008922	DDX42	100	92.812	ENSCSAG00000003914	DDX42	100	92.812	Chlorocebus_sabaeus
ENSSTOG00000008922	DDX42	79	95.536	ENSCHOG00000006241	DDX42	79	95.536	Choloepus_hoffmanni
ENSSTOG00000008922	DDX42	100	84.342	ENSCPBG00000026682	DDX42	100	84.864	Chrysemys_picta_bellii
ENSSTOG00000008922	DDX42	100	96.599	ENSCANG00000034663	DDX42	99	97.989	Colobus_angolensis_palliatus
ENSSTOG00000008922	DDX42	100	96.137	ENSCGRG00001009775	Ddx42	100	96.352	Cricetulus_griseus_chok1gshd
ENSSTOG00000008922	DDX42	100	96.137	ENSCGRG00000011718	Ddx42	100	96.352	Cricetulus_griseus_crigri
ENSSTOG00000008922	DDX42	91	74.005	ENSCSEG00000021574	ddx42	99	70.426	Cynoglossus_semilaevis
ENSSTOG00000008922	DDX42	99	69.799	ENSCVAG00000011404	ddx42	99	71.459	Cyprinodon_variegatus
ENSSTOG00000008922	DDX42	99	70.657	ENSDARG00000037928	ddx42	99	70.637	Danio_rerio
ENSSTOG00000008922	DDX42	100	90.426	ENSDNOG00000007961	DDX42	100	90.426	Dasypus_novemcinctus
ENSSTOG00000008922	DDX42	100	89.305	ENSDORG00000004199	Ddx42	100	89.305	Dipodomys_ordii
ENSSTOG00000008922	DDX42	66	60.514	FBgn0036104	CG6418	87	56.052	Drosophila_melanogaster
ENSSTOG00000008922	DDX42	80	73.342	ENSEBUG00000001155	ddx42	91	73.210	Eptatretus_burgeri
ENSSTOG00000008922	DDX42	100	97.972	ENSEASG00005013089	DDX42	100	97.972	Equus_asinus_asinus
ENSSTOG00000008922	DDX42	100	97.972	ENSECAG00000022684	DDX42	100	97.972	Equus_caballus
ENSSTOG00000008922	DDX42	67	100.000	ENSEEUG00000009144	DDX42	85	100.000	Erinaceus_europaeus
ENSSTOG00000008922	DDX42	100	70.137	ENSELUG00000020593	ddx42	100	70.397	Esox_lucius
ENSSTOG00000008922	DDX42	100	97.972	ENSFCAG00000003499	DDX42	100	97.972	Felis_catus
ENSSTOG00000008922	DDX42	94	85.504	ENSFALG00000004675	DDX42	74	88.612	Ficedula_albicollis
ENSSTOG00000008922	DDX42	100	97.428	ENSFDAG00000020516	DDX42	100	97.428	Fukomys_damarensis
ENSSTOG00000008922	DDX42	99	69.936	ENSFHEG00000023290	ddx42	99	70.961	Fundulus_heteroclitus
ENSSTOG00000008922	DDX42	76	78.138	ENSGMOG00000004595	ddx42	88	78.138	Gadus_morhua
ENSSTOG00000008922	DDX42	100	83.438	ENSGALG00000000581	DDX42	100	83.750	Gallus_gallus
ENSSTOG00000008922	DDX42	92	73.227	ENSGAFG00000011846	ddx42	96	74.299	Gambusia_affinis
ENSSTOG00000008922	DDX42	99	68.269	ENSGACG00000009782	ddx42	99	68.225	Gasterosteus_aculeatus
ENSSTOG00000008922	DDX42	100	84.623	ENSGAGG00000024411	DDX42	99	84.623	Gopherus_agassizii
ENSSTOG00000008922	DDX42	100	96.706	ENSGGOG00000006779	DDX42	100	96.706	Gorilla_gorilla
ENSSTOG00000008922	DDX42	90	76.561	ENSHBUG00000008705	ddx42	99	73.093	Haplochromis_burtoni
ENSSTOG00000008922	DDX42	100	93.133	ENSHGLG00000010024	DDX42	100	93.133	Heterocephalus_glaber_female
ENSSTOG00000008922	DDX42	100	97.439	ENSHGLG00100004479	-	100	97.439	Heterocephalus_glaber_male
ENSSTOG00000008922	DDX42	94	74.427	ENSHGLG00100007138	-	95	74.427	Heterocephalus_glaber_male
ENSSTOG00000008922	DDX42	84	77.891	ENSHCOG00000003357	ddx42	99	72.957	Hippocampus_comes
ENSSTOG00000008922	DDX42	80	79.657	ENSIPUG00000013327	ddx42	100	69.948	Ictalurus_punctatus
ENSSTOG00000008922	DDX42	100	96.674	ENSJJAG00000011727	Ddx42	100	96.674	Jaculus_jaculus
ENSSTOG00000008922	DDX42	99	70.882	ENSKMAG00000009914	ddx42	99	72.505	Kryptolebias_marmoratus
ENSSTOG00000008922	DDX42	99	66.525	ENSLBEG00000004687	ddx42	99	67.230	Labrus_bergylta
ENSSTOG00000008922	DDX42	99	76.099	ENSLACG00000013476	DDX42	97	78.242	Latimeria_chalumnae
ENSSTOG00000008922	DDX42	100	74.839	ENSLOCG00000011764	ddx42	100	75.161	Lepisosteus_oculatus
ENSSTOG00000008922	DDX42	100	97.118	ENSLAFG00000003249	DDX42	100	97.118	Loxodonta_africana
ENSSTOG00000008922	DDX42	100	96.493	ENSMFAG00000031356	DDX42	100	96.493	Macaca_fascicularis
ENSSTOG00000008922	DDX42	100	96.474	ENSMMUG00000016762	DDX42	100	96.474	Macaca_mulatta
ENSSTOG00000008922	DDX42	100	96.493	ENSMNEG00000038250	DDX42	100	96.493	Macaca_nemestrina
ENSSTOG00000008922	DDX42	100	96.599	ENSMLEG00000043080	DDX42	100	96.599	Mandrillus_leucophaeus
ENSSTOG00000008922	DDX42	90	76.914	ENSMAMG00000021888	ddx42	98	72.545	Mastacembelus_armatus
ENSSTOG00000008922	DDX42	90	76.325	ENSMZEG00005023103	ddx42	99	72.881	Maylandia_zebra
ENSSTOG00000008922	DDX42	100	82.972	ENSMGAG00000001822	DDX42	100	83.075	Meleagris_gallopavo
ENSSTOG00000008922	DDX42	76	97.872	ENSMAUG00000020774	-	94	97.872	Mesocricetus_auratus
ENSSTOG00000008922	DDX42	100	97.439	ENSMICG00000009952	DDX42	100	97.425	Microcebus_murinus
ENSSTOG00000008922	DDX42	100	95.708	ENSMOCG00000015504	Ddx42	100	95.708	Microtus_ochrogaster
ENSSTOG00000008922	DDX42	90	72.533	ENSMMOG00000016963	ddx42	87	71.676	Mola_mola
ENSSTOG00000008922	DDX42	50	98.073	ENSMODG00000009917	-	98	98.073	Monodelphis_domestica
ENSSTOG00000008922	DDX42	99	71.915	ENSMALG00000007800	ddx42	99	72.505	Monopterus_albus
ENSSTOG00000008922	DDX42	100	97.103	MGP_CAROLIEiJ_G0017314	Ddx42	100	97.103	Mus_caroli
ENSSTOG00000008922	DDX42	100	96.888	ENSMUSG00000020705	Ddx42	100	96.888	Mus_musculus
ENSSTOG00000008922	DDX42	76	99.553	MGP_PahariEiJ_G0018444	-	100	99.553	Mus_pahari
ENSSTOG00000008922	DDX42	100	96.888	MGP_SPRETEiJ_G0018158	Ddx42	100	96.888	Mus_spretus
ENSSTOG00000008922	DDX42	100	97.558	ENSMPUG00000014921	DDX42	100	97.558	Mustela_putorius_furo
ENSSTOG00000008922	DDX42	100	95.899	ENSMLUG00000011645	DDX42	100	95.899	Myotis_lucifugus
ENSSTOG00000008922	DDX42	100	96.996	ENSNGAG00000021897	Ddx42	100	96.996	Nannospalax_galili
ENSSTOG00000008922	DDX42	90	75.029	ENSNBRG00000004466	ddx42	99	71.822	Neolamprologus_brichardi
ENSSTOG00000008922	DDX42	100	96.674	ENSNLEG00000004248	DDX42	99	97.991	Nomascus_leucogenys
ENSSTOG00000008922	DDX42	74	82.788	ENSMEUG00000013227	-	85	82.788	Notamacropus_eugenii
ENSSTOG00000008922	DDX42	100	95.106	ENSOPRG00000014960	DDX42	100	95.106	Ochotona_princeps
ENSSTOG00000008922	DDX42	100	93.991	ENSODEG00000007810	DDX42	100	93.991	Octodon_degus
ENSSTOG00000008922	DDX42	90	76.443	ENSONIG00000000734	ddx42	99	73.093	Oreochromis_niloticus
ENSSTOG00000008922	DDX42	58	92.393	ENSOANG00000000265	DDX42	100	92.393	Ornithorhynchus_anatinus
ENSSTOG00000008922	DDX42	95	95.969	ENSOCUG00000004304	DDX42	88	95.969	Oryctolagus_cuniculus
ENSSTOG00000008922	DDX42	100	71.095	ENSORLG00000002395	ddx42	100	70.288	Oryzias_latipes
ENSSTOG00000008922	DDX42	100	71.444	ENSORLG00020011621	ddx42	100	71.975	Oryzias_latipes_hni
ENSSTOG00000008922	DDX42	100	71.005	ENSORLG00015004487	ddx42	100	71.762	Oryzias_latipes_hsok
ENSSTOG00000008922	DDX42	90	75.891	ENSOMEG00000020093	ddx42	100	72.038	Oryzias_melastigma
ENSSTOG00000008922	DDX42	100	97.021	ENSOGAG00000006872	DDX42	100	97.021	Otolemur_garnettii
ENSSTOG00000008922	DDX42	100	94.942	ENSOARG00000013540	DDX42	100	94.942	Ovis_aries
ENSSTOG00000008922	DDX42	100	96.812	ENSPPAG00000007496	DDX42	100	96.812	Pan_paniscus
ENSSTOG00000008922	DDX42	100	97.972	ENSPPRG00000002740	DDX42	100	97.972	Panthera_pardus
ENSSTOG00000008922	DDX42	100	97.866	ENSPTIG00000009932	DDX42	100	97.866	Panthera_tigris_altaica
ENSSTOG00000008922	DDX42	100	96.812	ENSPTRG00000009523	DDX42	100	96.812	Pan_troglodytes
ENSSTOG00000008922	DDX42	100	96.493	ENSPANG00000020990	DDX42	100	96.493	Papio_anubis
ENSSTOG00000008922	DDX42	100	69.797	ENSPKIG00000002901	ddx42	99	70.406	Paramormyrops_kingsleyae
ENSSTOG00000008922	DDX42	86	92.174	ENSPSIG00000010289	DDX42	98	91.872	Pelodiscus_sinensis
ENSSTOG00000008922	DDX42	100	66.808	ENSPMGG00000009323	ddx42	100	68.277	Periophthalmus_magnuspinnatus
ENSSTOG00000008922	DDX42	100	96.356	ENSPEMG00000006755	Ddx42	100	96.570	Peromyscus_maniculatus_bairdii
ENSSTOG00000008922	DDX42	80	72.346	ENSPMAG00000005580	ddx42	100	73.001	Petromyzon_marinus
ENSSTOG00000008922	DDX42	100	91.658	ENSPCIG00000009093	DDX42	100	91.869	Phascolarctos_cinereus
ENSSTOG00000008922	DDX42	99	69.958	ENSPFOG00000014104	ddx42	99	72.181	Poecilia_formosa
ENSSTOG00000008922	DDX42	99	69.958	ENSPLAG00000010522	ddx42	99	72.181	Poecilia_latipinna
ENSSTOG00000008922	DDX42	100	70.312	ENSPMEG00000010744	ddx42	99	71.878	Poecilia_mexicana
ENSSTOG00000008922	DDX42	100	69.485	ENSPREG00000009926	ddx42	99	71.132	Poecilia_reticulata
ENSSTOG00000008922	DDX42	100	94.603	ENSPPYG00000008531	DDX42	100	94.603	Pongo_abelii
ENSSTOG00000008922	DDX42	92	91.078	ENSPCAG00000002474	DDX42	100	91.078	Procavia_capensis
ENSSTOG00000008922	DDX42	100	87.727	ENSPCOG00000001559	DDX42	99	88.841	Propithecus_coquereli
ENSSTOG00000008922	DDX42	100	92.751	ENSPVAG00000000160	DDX42	100	92.857	Pteropus_vampyrus
ENSSTOG00000008922	DDX42	75	74.079	ENSPNYG00000013954	ddx42	97	70.125	Pundamilia_nyererei
ENSSTOG00000008922	DDX42	78	80.654	ENSPNAG00000017352	ddx42	99	69.065	Pygocentrus_nattereri
ENSSTOG00000008922	DDX42	100	96.781	ENSRNOG00000009474	Ddx42	100	96.781	Rattus_norvegicus
ENSSTOG00000008922	DDX42	100	96.599	ENSRBIG00000004781	DDX42	99	97.989	Rhinopithecus_bieti
ENSSTOG00000008922	DDX42	100	96.599	ENSRROG00000029794	DDX42	100	96.599	Rhinopithecus_roxellana
ENSSTOG00000008922	DDX42	100	96.798	ENSSBOG00000029624	DDX42	100	96.798	Saimiri_boliviensis_boliviensis
ENSSTOG00000008922	DDX42	100	92.186	ENSSHAG00000012896	-	100	92.397	Sarcophilus_harrisii
ENSSTOG00000008922	DDX42	71	61.391	ENSSHAG00000007919	-	99	61.391	Sarcophilus_harrisii
ENSSTOG00000008922	DDX42	81	81.603	ENSSFOG00015014064	ddx42	81	81.603	Scleropages_formosus
ENSSTOG00000008922	DDX42	99	71.429	ENSSMAG00000009077	ddx42	99	72.165	Scophthalmus_maximus
ENSSTOG00000008922	DDX42	99	72.081	ENSSDUG00000022221	ddx42	99	72.381	Seriola_dumerili
ENSSTOG00000008922	DDX42	99	71.842	ENSSLDG00000018483	ddx42	99	71.825	Seriola_lalandi_dorsalis
ENSSTOG00000008922	DDX42	100	96.265	ENSSARG00000009847	DDX42	100	96.265	Sorex_araneus
ENSSTOG00000008922	DDX42	100	83.871	ENSSPUG00000018806	DDX42	100	83.871	Sphenodon_punctatus
ENSSTOG00000008922	DDX42	90	76.706	ENSSPAG00000013055	ddx42	99	72.737	Stegastes_partitus
ENSSTOG00000008922	DDX42	86	95.291	ENSSSCG00000017289	DDX42	97	95.291	Sus_scrofa
ENSSTOG00000008922	DDX42	100	83.421	ENSTGUG00000001931	DDX42	100	83.421	Taeniopygia_guttata
ENSSTOG00000008922	DDX42	99	70.000	ENSTRUG00000010711	ddx42	99	81.333	Takifugu_rubripes
ENSSTOG00000008922	DDX42	82	94.087	ENSTBEG00000010159	DDX42	100	94.087	Tupaia_belangeri
ENSSTOG00000008922	DDX42	100	97.015	ENSTTRG00000006962	DDX42	100	97.015	Tursiops_truncatus
ENSSTOG00000008922	DDX42	100	97.545	ENSUAMG00000007321	DDX42	100	97.545	Ursus_americanus
ENSSTOG00000008922	DDX42	100	96.692	ENSUMAG00000017438	DDX42	100	96.692	Ursus_maritimus
ENSSTOG00000008922	DDX42	100	88.047	ENSVPAG00000009633	DDX42	100	88.047	Vicugna_pacos
ENSSTOG00000008922	DDX42	100	97.545	ENSVVUG00000006095	DDX42	100	97.545	Vulpes_vulpes
ENSSTOG00000008922	DDX42	100	76.385	ENSXETG00000003245	ddx42	100	76.250	Xenopus_tropicalis
ENSSTOG00000008922	DDX42	85	70.640	ENSXCOG00000017560	ddx42	97	71.338	Xiphophorus_couchianus
ENSSTOG00000008922	DDX42	100	71.368	ENSXMAG00000008138	ddx42	99	72.252	Xiphophorus_maculatus