EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSTOG00000009101 (Gene tree)
Gene ID: 101972597
Gene Symbol: TNRC6C
Alias: FLJ20015|KIAA1582
Full Name: trinucleotide repeat containing 6C
Gene Type: protein_coding
Species: Ictidomys_tridecemlineatus
Status: putative
Strand: Plus strand
Length: 85189 bases
Position: chrJH393404.1:2656045-2741233
Accession: 101972597
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSTOP00000008168	Ago_hook	PF10427.9	1.4e-21	1	1
ENSSTOP00000026986	Ago_hook	PF10427.9	1.5e-21	1	1
ENSSTOP00000026986	RRM_1	PF00076.22	0.00019	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSTOT00000009111	TNRC6C-201	5715	-	ENSSTOP00000008168	1905 (aa)	-	I3MCY5
ENSSTOT00000033716	TNRC6C-202	7775	XM_005332611	ENSSTOP00000026986	1737 (aa)	XP_005332668	A0A287D070

Gene Model

Click here to download ENSSTOG00000009101's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSTOG00000009101's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSTOG00000009101	TNRC6C	99	42.472	ENSSTOG00000023394	TNRC6A	96	41.447
ENSSTOG00000009101	TNRC6C	99	35.426	ENSSTOG00000008927	TNRC6B	70	36.728

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSTOG00000009101	TNRC6C	100	88.802	ENSG00000078687	TNRC6C	100	91.194	Homo_sapiens
ENSSTOG00000009101	TNRC6C	77	55.140	ENSAPOG00000019749	tnrc6c1	98	50.134	Acanthochromis_polyacanthus
ENSSTOG00000009101	TNRC6C	99	85.643	ENSAMEG00000013756	TNRC6C	99	85.587	Ailuropoda_melanoleuca
ENSSTOG00000009101	TNRC6C	93	51.958	ENSACIG00000008075	tnrc6c1	95	53.584	Amphilophus_citrinellus
ENSSTOG00000009101	TNRC6C	77	64.255	ENSAOCG00000023968	tnrc6c1	99	49.106	Amphiprion_ocellaris
ENSSTOG00000009101	TNRC6C	77	54.733	ENSAPEG00000009020	tnrc6c1	99	49.840	Amphiprion_percula
ENSSTOG00000009101	TNRC6C	100	83.686	ENSAPLG00000005456	TNRC6C	100	82.654	Anas_platyrhynchos
ENSSTOG00000009101	TNRC6C	100	84.879	ENSACAG00000016198	TNRC6C	98	83.654	Anolis_carolinensis
ENSSTOG00000009101	TNRC6C	100	88.627	ENSANAG00000021554	TNRC6C	100	91.307	Aotus_nancymaae
ENSSTOG00000009101	TNRC6C	93	51.961	ENSACLG00000000424	tnrc6c1	97	52.628	Astatotilapia_calliptera
ENSSTOG00000009101	TNRC6C	100	84.840	ENSBTAG00000018658	TNRC6C	100	87.411	Bos_taurus
ENSSTOG00000009101	TNRC6C	100	88.627	ENSCJAG00000019431	TNRC6C	100	90.952	Callithrix_jacchus
ENSSTOG00000009101	TNRC6C	99	87.620	ENSCAFG00000005224	TNRC6C	99	86.947	Canis_familiaris
ENSSTOG00000009101	TNRC6C	99	89.462	ENSCAFG00020006661	TNRC6C	100	88.692	Canis_lupus_dingo
ENSSTOG00000009101	TNRC6C	100	86.486	ENSCHIG00000026004	TNRC6C	100	85.697	Capra_hircus
ENSSTOG00000009101	TNRC6C	97	89.751	ENSTSYG00000005403	TNRC6C	100	89.867	Carlito_syrichta
ENSSTOG00000009101	TNRC6C	100	84.725	ENSCAPG00000007307	TNRC6C	99	85.524	Cavia_aperea
ENSSTOG00000009101	TNRC6C	100	89.988	ENSCPOG00000000467	TNRC6C	100	90.161	Cavia_porcellus
ENSSTOG00000009101	TNRC6C	100	89.188	ENSCCAG00000030524	TNRC6C	100	91.603	Cebus_capucinus
ENSSTOG00000009101	TNRC6C	100	88.796	ENSCATG00000033135	TNRC6C	100	91.130	Cercocebus_atys
ENSSTOG00000009101	TNRC6C	100	92.117	ENSCLAG00000011139	TNRC6C	99	91.397	Chinchilla_lanigera
ENSSTOG00000009101	TNRC6C	99	89.189	ENSCSAG00000005167	TNRC6C	99	88.970	Chlorocebus_sabaeus
ENSSTOG00000009101	TNRC6C	76	91.892	ENSCHOG00000000088	TNRC6C	75	91.011	Choloepus_hoffmanni
ENSSTOG00000009101	TNRC6C	100	87.019	ENSCPBG00000027960	TNRC6C	100	86.635	Chrysemys_picta_bellii
ENSSTOG00000009101	TNRC6C	100	88.571	ENSCANG00000041771	TNRC6C	100	90.893	Colobus_angolensis_palliatus
ENSSTOG00000009101	TNRC6C	100	89.748	ENSCGRG00001022686	Tnrc6c	100	89.210	Cricetulus_griseus_chok1gshd
ENSSTOG00000009101	TNRC6C	100	90.161	ENSCGRG00000018041	Tnrc6c	100	89.210	Cricetulus_griseus_crigri
ENSSTOG00000009101	TNRC6C	99	48.112	ENSCSEG00000012744	tnrc6c1	98	45.043	Cynoglossus_semilaevis
ENSSTOG00000009101	TNRC6C	99	53.545	ENSDARG00000076847	tnrc6c1	84	59.065	Danio_rerio
ENSSTOG00000009101	TNRC6C	100	86.581	ENSDNOG00000003247	TNRC6C	99	84.528	Dasypus_novemcinctus
ENSSTOG00000009101	TNRC6C	100	86.819	ENSDORG00000004558	Tnrc6c	100	87.847	Dipodomys_ordii
ENSSTOG00000009101	TNRC6C	90	82.000	ENSETEG00000005527	TNRC6C	90	82.348	Echinops_telfairi
ENSSTOG00000009101	TNRC6C	97	89.047	ENSEASG00005004799	TNRC6C	100	89.284	Equus_asinus_asinus
ENSSTOG00000009101	TNRC6C	100	88.959	ENSECAG00000012486	TNRC6C	99	88.451	Equus_caballus
ENSSTOG00000009101	TNRC6C	96	86.255	ENSEEUG00000010008	TNRC6C	96	86.347	Erinaceus_europaeus
ENSSTOG00000009101	TNRC6C	100	84.955	ENSFCAG00000028358	TNRC6C	100	87.367	Felis_catus
ENSSTOG00000009101	TNRC6C	97	82.823	ENSFALG00000000848	TNRC6C	100	82.426	Ficedula_albicollis
ENSSTOG00000009101	TNRC6C	100	90.967	ENSFDAG00000010368	TNRC6C	100	91.427	Fukomys_damarensis
ENSSTOG00000009101	TNRC6C	99	51.657	ENSFHEG00000002936	tnrc6c1	79	52.432	Fundulus_heteroclitus
ENSSTOG00000009101	TNRC6C	100	85.256	ENSGALG00000001725	TNRC6C	100	86.730	Gallus_gallus
ENSSTOG00000009101	TNRC6C	99	48.896	ENSGAFG00000019019	tnrc6c1	83	54.084	Gambusia_affinis
ENSSTOG00000009101	TNRC6C	91	54.572	ENSGACG00000012320	tnrc6c1	97	48.664	Gasterosteus_aculeatus
ENSSTOG00000009101	TNRC6C	100	86.625	ENSGAGG00000022043	TNRC6C	99	85.642	Gopherus_agassizii
ENSSTOG00000009101	TNRC6C	100	88.130	ENSGGOG00000011304	TNRC6C	100	90.366	Gorilla_gorilla
ENSSTOG00000009101	TNRC6C	95	52.186	ENSHBUG00000010846	tnrc6c1	97	52.856	Haplochromis_burtoni
ENSSTOG00000009101	TNRC6C	100	91.369	ENSHGLG00000004809	TNRC6C	99	90.605	Heterocephalus_glaber_female
ENSSTOG00000009101	TNRC6C	100	91.008	ENSHGLG00100012597	TNRC6C	99	91.136	Heterocephalus_glaber_male
ENSSTOG00000009101	TNRC6C	99	52.477	ENSIPUG00000000818	tnrc6c1	98	52.323	Ictalurus_punctatus
ENSSTOG00000009101	TNRC6C	100	89.404	ENSJJAG00000017055	Tnrc6c	99	89.443	Jaculus_jaculus
ENSSTOG00000009101	TNRC6C	99	48.197	ENSKMAG00000021023	tnrc6c1	85	54.811	Kryptolebias_marmoratus
ENSSTOG00000009101	TNRC6C	100	74.658	ENSLACG00000015283	TNRC6C	100	74.829	Latimeria_chalumnae
ENSSTOG00000009101	TNRC6C	100	56.749	ENSLOCG00000013377	tnrc6c1	99	56.796	Lepisosteus_oculatus
ENSSTOG00000009101	TNRC6C	100	88.711	ENSLAFG00000011122	TNRC6C	99	88.417	Loxodonta_africana
ENSSTOG00000009101	TNRC6C	100	88.908	ENSMFAG00000043943	TNRC6C	100	91.248	Macaca_fascicularis
ENSSTOG00000009101	TNRC6C	100	89.252	ENSMMUG00000011924	TNRC6C	100	91.248	Macaca_mulatta
ENSSTOG00000009101	TNRC6C	100	88.852	ENSMNEG00000030405	TNRC6C	100	91.189	Macaca_nemestrina
ENSSTOG00000009101	TNRC6C	100	88.852	ENSMLEG00000033436	TNRC6C	100	91.189	Mandrillus_leucophaeus
ENSSTOG00000009101	TNRC6C	95	52.259	ENSMAMG00000023613	tnrc6c1	85	54.278	Mastacembelus_armatus
ENSSTOG00000009101	TNRC6C	93	51.961	ENSMZEG00005010920	tnrc6c1	97	52.628	Maylandia_zebra
ENSSTOG00000009101	TNRC6C	100	77.461	ENSMGAG00000003906	TNRC6C	100	77.282	Meleagris_gallopavo
ENSSTOG00000009101	TNRC6C	97	89.682	ENSMAUG00000021618	Tnrc6c	100	89.917	Mesocricetus_auratus
ENSSTOG00000009101	TNRC6C	100	89.070	ENSMICG00000003952	TNRC6C	100	91.302	Microcebus_murinus
ENSSTOG00000009101	TNRC6C	100	91.369	ENSMOCG00000015879	Tnrc6c	100	91.139	Microtus_ochrogaster
ENSSTOG00000009101	TNRC6C	76	55.931	ENSMMOG00000005203	tnrc6c1	83	55.524	Mola_mola
ENSSTOG00000009101	TNRC6C	100	85.249	ENSMODG00000001785	TNRC6C	99	84.889	Monodelphis_domestica
ENSSTOG00000009101	TNRC6C	100	91.427	MGP_CAROLIEiJ_G0017465	Tnrc6c	100	91.139	Mus_caroli
ENSSTOG00000009101	TNRC6C	100	91.082	ENSMUSG00000025571	Tnrc6c	100	90.794	Mus_musculus
ENSSTOG00000009101	TNRC6C	100	91.197	MGP_PahariEiJ_G0018593	Tnrc6c	100	90.909	Mus_pahari
ENSSTOG00000009101	TNRC6C	100	91.024	MGP_SPRETEiJ_G0018309	Tnrc6c	100	90.736	Mus_spretus
ENSSTOG00000009101	TNRC6C	99	85.867	ENSMPUG00000013348	TNRC6C	98	85.172	Mustela_putorius_furo
ENSSTOG00000009101	TNRC6C	100	81.149	ENSMLUG00000014431	TNRC6C	98	81.011	Myotis_lucifugus
ENSSTOG00000009101	TNRC6C	100	90.092	ENSNGAG00000012203	Tnrc6c	99	90.653	Nannospalax_galili
ENSSTOG00000009101	TNRC6C	95	52.811	ENSNBRG00000005344	tnrc6c1	97	53.338	Neolamprologus_brichardi
ENSSTOG00000009101	TNRC6C	99	86.155	ENSNLEG00000000047	TNRC6C	99	86.736	Nomascus_leucogenys
ENSSTOG00000009101	TNRC6C	98	79.553	ENSMEUG00000005104	TNRC6C	100	79.612	Notamacropus_eugenii
ENSSTOG00000009101	TNRC6C	97	92.239	ENSODEG00000012499	TNRC6C	100	92.358	Octodon_degus
ENSSTOG00000009101	TNRC6C	92	53.361	ENSONIG00000002210	tnrc6c1	93	55.353	Oreochromis_niloticus
ENSSTOG00000009101	TNRC6C	100	82.979	ENSOANG00000009758	-	92	82.979	Ornithorhynchus_anatinus
ENSSTOG00000009101	TNRC6C	85	80.395	ENSOCUG00000006122	TNRC6C	96	80.303	Oryctolagus_cuniculus
ENSSTOG00000009101	TNRC6C	99	47.838	ENSORLG00000009837	tnrc6c1	100	67.286	Oryzias_latipes
ENSSTOG00000009101	TNRC6C	99	46.900	ENSORLG00020016510	tnrc6c1	100	49.001	Oryzias_latipes_hni
ENSSTOG00000009101	TNRC6C	81	43.048	ENSORLG00015000171	tnrc6c1	98	44.199	Oryzias_latipes_hsok
ENSSTOG00000009101	TNRC6C	99	48.350	ENSOMEG00000000357	tnrc6c1	99	48.336	Oryzias_melastigma
ENSSTOG00000009101	TNRC6C	97	88.072	ENSOGAG00000007197	TNRC6C	100	88.188	Otolemur_garnettii
ENSSTOG00000009101	TNRC6C	96	81.749	ENSOARG00000006041	TNRC6C	98	81.936	Ovis_aries
ENSSTOG00000009101	TNRC6C	100	88.796	ENSPPAG00000027160	TNRC6C	100	91.130	Pan_paniscus
ENSSTOG00000009101	TNRC6C	100	85.067	ENSPPRG00000018881	TNRC6C	100	87.485	Panthera_pardus
ENSSTOG00000009101	TNRC6C	90	82.437	ENSPTIG00000008791	TNRC6C	90	80.541	Panthera_tigris_altaica
ENSSTOG00000009101	TNRC6C	100	88.908	ENSPTRG00000009699	TNRC6C	100	91.248	Pan_troglodytes
ENSSTOG00000009101	TNRC6C	100	88.908	ENSPANG00000019994	TNRC6C	100	91.410	Papio_anubis
ENSSTOG00000009101	TNRC6C	94	51.931	ENSPKIG00000005428	tnrc6c1	98	51.197	Paramormyrops_kingsleyae
ENSSTOG00000009101	TNRC6C	100	84.673	ENSPSIG00000018069	TNRC6C	100	84.328	Pelodiscus_sinensis
ENSSTOG00000009101	TNRC6C	75	54.409	ENSPMGG00000022911	tnrc6c1	97	63.968	Periophthalmus_magnuspinnatus
ENSSTOG00000009101	TNRC6C	100	90.435	ENSPEMG00000009785	Tnrc6c	99	90.866	Peromyscus_maniculatus_bairdii
ENSSTOG00000009101	TNRC6C	56	82.341	ENSPCIG00000017421	-	99	82.238	Phascolarctos_cinereus
ENSSTOG00000009101	TNRC6C	100	47.773	ENSPFOG00000012560	tnrc6c1	97	53.495	Poecilia_formosa
ENSSTOG00000009101	TNRC6C	97	49.333	ENSPLAG00000021055	tnrc6c1	100	49.612	Poecilia_latipinna
ENSSTOG00000009101	TNRC6C	100	89.252	ENSPPYG00000008679	TNRC6C	98	89.126	Pongo_abelii
ENSSTOG00000009101	TNRC6C	93	92.417	ENSPCAG00000012510	TNRC6C	94	92.417	Procavia_capensis
ENSSTOG00000009101	TNRC6C	97	91.839	ENSPCOG00000021451	TNRC6C	100	91.780	Propithecus_coquereli
ENSSTOG00000009101	TNRC6C	96	88.136	ENSPVAG00000002008	TNRC6C	95	88.136	Pteropus_vampyrus
ENSSTOG00000009101	TNRC6C	93	51.486	ENSPNYG00000014477	tnrc6c1	97	52.189	Pundamilia_nyererei
ENSSTOG00000009101	TNRC6C	97	90.296	ENSRNOG00000022395	Tnrc6c	100	90.178	Rattus_norvegicus
ENSSTOG00000009101	TNRC6C	100	88.908	ENSRBIG00000027777	TNRC6C	100	91.189	Rhinopithecus_bieti
ENSSTOG00000009101	TNRC6C	100	88.964	ENSRROG00000042912	TNRC6C	100	91.248	Rhinopithecus_roxellana
ENSSTOG00000009101	TNRC6C	100	88.983	ENSSBOG00000023981	TNRC6C	100	89.114	Saimiri_boliviensis_boliviensis
ENSSTOG00000009101	TNRC6C	51	86.595	ENSSHAG00000018330	-	100	85.946	Sarcophilus_harrisii
ENSSTOG00000009101	TNRC6C	61	56.462	ENSSFOG00015004735	-	99	60.836	Scleropages_formosus
ENSSTOG00000009101	TNRC6C	91	58.136	ENSSFOG00015006475	tnrc6c1	77	57.015	Scleropages_formosus
ENSSTOG00000009101	TNRC6C	99	48.340	ENSSMAG00000012761	tnrc6c1	85	54.940	Scophthalmus_maximus
ENSSTOG00000009101	TNRC6C	99	50.250	ENSSDUG00000002366	tnrc6c1	98	50.622	Seriola_dumerili
ENSSTOG00000009101	TNRC6C	97	50.030	ENSSLDG00000025613	tnrc6c1	97	50.855	Seriola_lalandi_dorsalis
ENSSTOG00000009101	TNRC6C	91	89.224	ENSSARG00000006816	TNRC6C	91	88.987	Sorex_araneus
ENSSTOG00000009101	TNRC6C	80	84.108	ENSSPUG00000007341	TNRC6C	98	83.484	Sphenodon_punctatus
ENSSTOG00000009101	TNRC6C	76	53.442	ENSSPAG00000014977	tnrc6c1	98	48.408	Stegastes_partitus
ENSSTOG00000009101	TNRC6C	97	85.317	ENSSSCG00000034373	TNRC6C	100	87.500	Sus_scrofa
ENSSTOG00000009101	TNRC6C	100	86.854	ENSTGUG00000007733	TNRC6C	100	86.395	Taeniopygia_guttata
ENSSTOG00000009101	TNRC6C	76	54.276	ENSTRUG00000011685	tnrc6c1	100	49.231	Takifugu_rubripes
ENSSTOG00000009101	TNRC6C	99	54.748	ENSTNIG00000005273	tnrc6c1	100	59.863	Tetraodon_nigroviridis
ENSSTOG00000009101	TNRC6C	62	90.234	ENSTBEG00000005046	TNRC6C	100	82.762	Tupaia_belangeri
ENSSTOG00000009101	TNRC6C	100	88.698	ENSTTRG00000010828	TNRC6C	99	88.698	Tursiops_truncatus
ENSSTOG00000009101	TNRC6C	99	86.842	ENSUMAG00000013614	TNRC6C	99	87.003	Ursus_maritimus
ENSSTOG00000009101	TNRC6C	50	80.410	ENSVPAG00000006765	-	99	80.412	Vicugna_pacos
ENSSTOG00000009101	TNRC6C	97	90.053	ENSVVUG00000015268	TNRC6C	100	90.112	Vulpes_vulpes
ENSSTOG00000009101	TNRC6C	97	73.415	ENSXETG00000019470	tnrc6c	100	73.005	Xenopus_tropicalis
ENSSTOG00000009101	TNRC6C	99	50.139	ENSXMAG00000025971	tnrc6c1	83	53.984	Xiphophorus_maculatus