EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSTOG00000009528 (Gene tree)
Gene ID: 101965206
Gene Symbol: CPSF2
Alias: CPSF100|KIAA1367
Full Name: cleavage and polyadenylation specific factor 2
Gene Type: protein_coding
Species: Ictidomys_tridecemlineatus
Status: putative
Strand: Plus strand
Length: 30134 bases
Position: chrJH393543.1:367109-397242
Accession: 101965206
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSTOP00000008548	Beta-Casp	PF10996.8	8.2e-21	1	1
ENSSTOP00000008548	Lactamase_B	PF00753.27	1.4e-06	1	1
ENSSTOP00000008548	RMMBL	PF07521.12	1e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSTOT00000009529	CPSF2-201	2812	XM_005339139	ENSSTOP00000008548	782 (aa)	XP_005339196	I3MDQ4

Gene Model

Click here to download ENSSTOG00000009528's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSTOG00000009528's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSTOG00000009528	CPSF2	100	99.616	ENSG00000165934	CPSF2	100	100.000	Homo_sapiens
ENSSTOG00000009528	CPSF2	100	86.058	ENSAPOG00000001242	cpsf2	100	86.058	Acanthochromis_polyacanthus
ENSSTOG00000009528	CPSF2	100	86.456	ENSACIG00000009331	cpsf2	100	86.456	Amphilophus_citrinellus
ENSSTOG00000009528	CPSF2	100	86.185	ENSAOCG00000014095	cpsf2	100	86.185	Amphiprion_ocellaris
ENSSTOG00000009528	CPSF2	100	86.185	ENSAPEG00000009158	cpsf2	100	86.185	Amphiprion_percula
ENSSTOG00000009528	CPSF2	96	86.316	ENSATEG00000017644	cpsf2	100	84.474	Anabas_testudineus
ENSSTOG00000009528	CPSF2	100	96.051	ENSAPLG00000006330	CPSF2	100	96.051	Anas_platyrhynchos
ENSSTOG00000009528	CPSF2	100	95.147	ENSACAG00000009245	CPSF2	100	95.147	Anolis_carolinensis
ENSSTOG00000009528	CPSF2	100	99.872	ENSANAG00000022915	CPSF2	100	99.872	Aotus_nancymaae
ENSSTOG00000009528	CPSF2	100	85.769	ENSAMXG00000018696	cpsf2	100	85.769	Astyanax_mexicanus
ENSSTOG00000009528	CPSF2	100	99.616	ENSBTAG00000010227	CPSF2	100	99.616	Bos_taurus
ENSSTOG00000009528	CPSF2	100	41.569	WBGene00017313	cpsf-2	100	41.032	Caenorhabditis_elegans
ENSSTOG00000009528	CPSF2	100	99.872	ENSCJAG00000018069	CPSF2	100	99.872	Callithrix_jacchus
ENSSTOG00000009528	CPSF2	100	99.744	ENSCAFG00000010909	CPSF2	100	99.744	Canis_familiaris
ENSSTOG00000009528	CPSF2	100	99.744	ENSCAFG00020020670	CPSF2	100	99.744	Canis_lupus_dingo
ENSSTOG00000009528	CPSF2	100	99.616	ENSCHIG00000023848	CPSF2	100	99.616	Capra_hircus
ENSSTOG00000009528	CPSF2	100	98.721	ENSTSYG00000009036	CPSF2	100	98.721	Carlito_syrichta
ENSSTOG00000009528	CPSF2	100	99.872	ENSCPOG00000010899	CPSF2	100	99.872	Cavia_porcellus
ENSSTOG00000009528	CPSF2	100	99.872	ENSCCAG00000028088	CPSF2	100	99.872	Cebus_capucinus
ENSSTOG00000009528	CPSF2	100	99.744	ENSCATG00000030132	CPSF2	100	99.744	Cercocebus_atys
ENSSTOG00000009528	CPSF2	100	99.744	ENSCLAG00000012404	CPSF2	100	99.744	Chinchilla_lanigera
ENSSTOG00000009528	CPSF2	100	99.744	ENSCSAG00000011300	CPSF2	100	99.744	Chlorocebus_sabaeus
ENSSTOG00000009528	CPSF2	100	92.583	ENSCHOG00000012904	CPSF2	100	92.583	Choloepus_hoffmanni
ENSSTOG00000009528	CPSF2	100	96.424	ENSCPBG00000008766	CPSF2	97	96.424	Chrysemys_picta_bellii
ENSSTOG00000009528	CPSF2	100	54.795	ENSCING00000007881	-	100	54.421	Ciona_intestinalis
ENSSTOG00000009528	CPSF2	94	99.727	ENSCANG00000041651	CPSF2	100	99.727	Colobus_angolensis_palliatus
ENSSTOG00000009528	CPSF2	100	98.593	ENSCGRG00001006901	Cpsf2	100	98.593	Cricetulus_griseus_chok1gshd
ENSSTOG00000009528	CPSF2	100	98.593	ENSCGRG00000012416	Cpsf2	100	98.593	Cricetulus_griseus_crigri
ENSSTOG00000009528	CPSF2	100	83.904	ENSCSEG00000004116	cpsf2	100	83.904	Cynoglossus_semilaevis
ENSSTOG00000009528	CPSF2	100	85.425	ENSCVAG00000000095	cpsf2	100	85.551	Cyprinodon_variegatus
ENSSTOG00000009528	CPSF2	100	85.696	ENSDARG00000028971	cpsf2	100	85.696	Danio_rerio
ENSSTOG00000009528	CPSF2	100	99.616	ENSDNOG00000042757	CPSF2	100	99.616	Dasypus_novemcinctus
ENSSTOG00000009528	CPSF2	100	99.488	ENSDORG00000013709	Cpsf2	100	99.488	Dipodomys_ordii
ENSSTOG00000009528	CPSF2	100	54.172	FBgn0027873	Cpsf100	100	53.933	Drosophila_melanogaster
ENSSTOG00000009528	CPSF2	100	90.421	ENSETEG00000012123	CPSF2	100	90.421	Echinops_telfairi
ENSSTOG00000009528	CPSF2	52	76.471	ENSEBUG00000012098	cpsf2	93	76.471	Eptatretus_burgeri
ENSSTOG00000009528	CPSF2	91	97.611	ENSEASG00005021193	CPSF2	100	97.611	Equus_asinus_asinus
ENSSTOG00000009528	CPSF2	100	99.616	ENSECAG00000023935	CPSF2	100	99.616	Equus_caballus
ENSSTOG00000009528	CPSF2	100	84.065	ENSELUG00000008442	cpsf2	100	84.065	Esox_lucius
ENSSTOG00000009528	CPSF2	100	99.616	ENSFCAG00000007886	CPSF2	100	99.616	Felis_catus
ENSSTOG00000009528	CPSF2	100	96.296	ENSFALG00000002412	CPSF2	100	96.296	Ficedula_albicollis
ENSSTOG00000009528	CPSF2	100	99.744	ENSFDAG00000006327	CPSF2	100	99.744	Fukomys_damarensis
ENSSTOG00000009528	CPSF2	96	84.706	ENSFHEG00000015465	cpsf2	98	84.967	Fundulus_heteroclitus
ENSSTOG00000009528	CPSF2	100	83.586	ENSGMOG00000008761	cpsf2	100	83.586	Gadus_morhua
ENSSTOG00000009528	CPSF2	100	95.530	ENSGALG00000010783	CPSF2	100	96.041	Gallus_gallus
ENSSTOG00000009528	CPSF2	100	85.678	ENSGAFG00000001407	cpsf2	100	85.678	Gambusia_affinis
ENSSTOG00000009528	CPSF2	100	84.664	ENSGACG00000008418	cpsf2	100	84.664	Gasterosteus_aculeatus
ENSSTOG00000009528	CPSF2	100	96.552	ENSGAGG00000008287	CPSF2	100	96.552	Gopherus_agassizii
ENSSTOG00000009528	CPSF2	100	99.616	ENSGGOG00000011799	CPSF2	100	99.616	Gorilla_gorilla
ENSSTOG00000009528	CPSF2	100	85.298	ENSHBUG00000023466	cpsf2	100	85.298	Haplochromis_burtoni
ENSSTOG00000009528	CPSF2	100	99.616	ENSHGLG00000018311	CPSF2	100	99.616	Heterocephalus_glaber_female
ENSSTOG00000009528	CPSF2	100	99.616	ENSHGLG00100016460	CPSF2	100	99.616	Heterocephalus_glaber_male
ENSSTOG00000009528	CPSF2	100	84.791	ENSHCOG00000019527	cpsf2	98	84.791	Hippocampus_comes
ENSSTOG00000009528	CPSF2	100	85.769	ENSIPUG00000020857	cpsf2	100	85.769	Ictalurus_punctatus
ENSSTOG00000009528	CPSF2	100	99.361	ENSJJAG00000017925	Cpsf2	100	99.361	Jaculus_jaculus
ENSSTOG00000009528	CPSF2	100	84.918	ENSKMAG00000019429	cpsf2	100	84.918	Kryptolebias_marmoratus
ENSSTOG00000009528	CPSF2	95	84.225	ENSLBEG00000011585	cpsf2	100	84.492	Labrus_bergylta
ENSSTOG00000009528	CPSF2	100	89.655	ENSLACG00000019024	CPSF2	100	89.911	Latimeria_chalumnae
ENSSTOG00000009528	CPSF2	100	87.706	ENSLOCG00000014102	cpsf2	100	87.706	Lepisosteus_oculatus
ENSSTOG00000009528	CPSF2	100	99.362	ENSLAFG00000004891	CPSF2	100	99.362	Loxodonta_africana
ENSSTOG00000009528	CPSF2	100	99.744	ENSMFAG00000041212	CPSF2	100	99.744	Macaca_fascicularis
ENSSTOG00000009528	CPSF2	100	99.744	ENSMMUG00000000699	CPSF2	100	99.744	Macaca_mulatta
ENSSTOG00000009528	CPSF2	100	99.744	ENSMNEG00000031584	CPSF2	100	99.744	Macaca_nemestrina
ENSSTOG00000009528	CPSF2	100	99.744	ENSMLEG00000029394	CPSF2	100	99.744	Mandrillus_leucophaeus
ENSSTOG00000009528	CPSF2	100	85.932	ENSMAMG00000004235	cpsf2	100	85.932	Mastacembelus_armatus
ENSSTOG00000009528	CPSF2	100	85.425	ENSMZEG00005001769	cpsf2	100	85.425	Maylandia_zebra
ENSSTOG00000009528	CPSF2	100	95.536	ENSMGAG00000013122	CPSF2	100	96.046	Meleagris_gallopavo
ENSSTOG00000009528	CPSF2	100	98.593	ENSMAUG00000015160	Cpsf2	100	98.593	Mesocricetus_auratus
ENSSTOG00000009528	CPSF2	100	99.616	ENSMICG00000016441	CPSF2	100	99.616	Microcebus_murinus
ENSSTOG00000009528	CPSF2	100	98.593	ENSMOCG00000015372	Cpsf2	100	98.593	Microtus_ochrogaster
ENSSTOG00000009528	CPSF2	100	81.369	ENSMMOG00000015590	cpsf2	100	81.369	Mola_mola
ENSSTOG00000009528	CPSF2	100	99.233	ENSMODG00000002042	CPSF2	100	99.233	Monodelphis_domestica
ENSSTOG00000009528	CPSF2	100	82.890	ENSMALG00000022275	cpsf2	100	82.890	Monopterus_albus
ENSSTOG00000009528	CPSF2	100	98.082	ENSMUSG00000041781	Cpsf2	100	98.082	Mus_musculus
ENSSTOG00000009528	CPSF2	100	98.338	MGP_PahariEiJ_G0029791	Cpsf2	100	98.338	Mus_pahari
ENSSTOG00000009528	CPSF2	100	98.082	MGP_SPRETEiJ_G0018877	Cpsf2	100	98.082	Mus_spretus
ENSSTOG00000009528	CPSF2	100	99.744	ENSMPUG00000007617	CPSF2	98	99.744	Mustela_putorius_furo
ENSSTOG00000009528	CPSF2	100	98.977	ENSMLUG00000005570	CPSF2	100	98.977	Myotis_lucifugus
ENSSTOG00000009528	CPSF2	100	99.105	ENSNGAG00000020312	Cpsf2	100	99.105	Nannospalax_galili
ENSSTOG00000009528	CPSF2	100	85.805	ENSNBRG00000022402	cpsf2	100	85.805	Neolamprologus_brichardi
ENSSTOG00000009528	CPSF2	100	98.721	ENSNLEG00000017132	CPSF2	100	98.721	Nomascus_leucogenys
ENSSTOG00000009528	CPSF2	91	99.676	ENSMEUG00000008138	CPSF2	91	99.676	Notamacropus_eugenii
ENSSTOG00000009528	CPSF2	94	91.803	ENSOPRG00000008484	-	100	91.803	Ochotona_princeps
ENSSTOG00000009528	CPSF2	100	99.488	ENSODEG00000008682	CPSF2	100	99.488	Octodon_degus
ENSSTOG00000009528	CPSF2	100	86.185	ENSONIG00000005901	cpsf2	100	86.185	Oreochromis_niloticus
ENSSTOG00000009528	CPSF2	100	98.593	ENSOANG00000003822	CPSF2	100	98.593	Ornithorhynchus_anatinus
ENSSTOG00000009528	CPSF2	100	99.361	ENSOCUG00000005713	CPSF2	100	99.361	Oryctolagus_cuniculus
ENSSTOG00000009528	CPSF2	100	80.228	ENSORLG00000011628	cpsf2	100	80.228	Oryzias_latipes
ENSSTOG00000009528	CPSF2	100	85.044	ENSORLG00020016980	cpsf2	100	85.044	Oryzias_latipes_hni
ENSSTOG00000009528	CPSF2	100	85.044	ENSORLG00015011910	cpsf2	100	85.044	Oryzias_latipes_hsok
ENSSTOG00000009528	CPSF2	100	84.284	ENSOMEG00000022876	cpsf2	100	84.284	Oryzias_melastigma
ENSSTOG00000009528	CPSF2	100	96.556	ENSOARG00000012889	CPSF2	100	96.556	Ovis_aries
ENSSTOG00000009528	CPSF2	100	99.616	ENSPPAG00000039666	CPSF2	100	99.616	Pan_paniscus
ENSSTOG00000009528	CPSF2	99	99.616	ENSPPRG00000010869	CPSF2	100	99.616	Panthera_pardus
ENSSTOG00000009528	CPSF2	100	99.616	ENSPTIG00000021202	CPSF2	100	99.616	Panthera_tigris_altaica
ENSSTOG00000009528	CPSF2	100	99.616	ENSPTRG00000006651	CPSF2	100	99.616	Pan_troglodytes
ENSSTOG00000009528	CPSF2	100	99.744	ENSPANG00000017417	CPSF2	100	99.744	Papio_anubis
ENSSTOG00000009528	CPSF2	100	82.211	ENSPKIG00000021453	cpsf2	100	82.211	Paramormyrops_kingsleyae
ENSSTOG00000009528	CPSF2	100	95.913	ENSPSIG00000006289	CPSF2	100	95.913	Pelodiscus_sinensis
ENSSTOG00000009528	CPSF2	76	79.734	ENSPMGG00000002511	cpsf2	100	80.066	Periophthalmus_magnuspinnatus
ENSSTOG00000009528	CPSF2	100	98.849	ENSPEMG00000007917	Cpsf2	100	98.849	Peromyscus_maniculatus_bairdii
ENSSTOG00000009528	CPSF2	100	74.336	ENSPMAG00000006205	cpsf2	100	74.336	Petromyzon_marinus
ENSSTOG00000009528	CPSF2	100	99.233	ENSPCIG00000011393	CPSF2	100	99.233	Phascolarctos_cinereus
ENSSTOG00000009528	CPSF2	100	85.551	ENSPFOG00000018648	cpsf2	100	85.551	Poecilia_formosa
ENSSTOG00000009528	CPSF2	100	85.551	ENSPLAG00000019199	cpsf2	99	85.551	Poecilia_latipinna
ENSSTOG00000009528	CPSF2	96	85.921	ENSPMEG00000012100	cpsf2	100	85.294	Poecilia_mexicana
ENSSTOG00000009528	CPSF2	100	85.425	ENSPREG00000008960	cpsf2	100	85.425	Poecilia_reticulata
ENSSTOG00000009528	CPSF2	63	99.395	ENSPPYG00000029685	-	100	99.395	Pongo_abelii
ENSSTOG00000009528	CPSF2	100	99.233	ENSPCAG00000012477	CPSF2	100	99.233	Procavia_capensis
ENSSTOG00000009528	CPSF2	100	99.616	ENSPCOG00000026387	CPSF2	100	99.616	Propithecus_coquereli
ENSSTOG00000009528	CPSF2	65	100.000	ENSPVAG00000004223	CPSF2	65	100.000	Pteropus_vampyrus
ENSSTOG00000009528	CPSF2	100	85.443	ENSPNYG00000023356	cpsf2	100	85.443	Pundamilia_nyererei
ENSSTOG00000009528	CPSF2	100	86.912	ENSPNAG00000001849	cpsf2	100	86.912	Pygocentrus_nattereri
ENSSTOG00000009528	CPSF2	100	98.465	ENSRNOG00000005733	Cpsf2	100	98.465	Rattus_norvegicus
ENSSTOG00000009528	CPSF2	100	99.744	ENSRBIG00000044792	CPSF2	100	99.744	Rhinopithecus_bieti
ENSSTOG00000009528	CPSF2	100	99.744	ENSRROG00000034875	CPSF2	100	99.744	Rhinopithecus_roxellana
ENSSTOG00000009528	CPSF2	100	99.872	ENSSBOG00000024571	CPSF2	100	99.872	Saimiri_boliviensis_boliviensis
ENSSTOG00000009528	CPSF2	100	99.361	ENSSHAG00000010458	CPSF2	100	99.361	Sarcophilus_harrisii
ENSSTOG00000009528	CPSF2	100	87.294	ENSSFOG00015002117	cpsf2	100	87.294	Scleropages_formosus
ENSSTOG00000009528	CPSF2	100	84.284	ENSSMAG00000002001	cpsf2	100	84.284	Scophthalmus_maximus
ENSSTOG00000009528	CPSF2	100	86.312	ENSSDUG00000004084	cpsf2	100	86.312	Seriola_dumerili
ENSSTOG00000009528	CPSF2	100	85.805	ENSSLDG00000024330	cpsf2	100	85.805	Seriola_lalandi_dorsalis
ENSSTOG00000009528	CPSF2	58	100.000	ENSSARG00000009784	-	63	100.000	Sorex_araneus
ENSSTOG00000009528	CPSF2	100	95.785	ENSSPUG00000013485	CPSF2	100	95.785	Sphenodon_punctatus
ENSSTOG00000009528	CPSF2	100	85.425	ENSSPAG00000013284	cpsf2	100	85.425	Stegastes_partitus
ENSSTOG00000009528	CPSF2	100	99.616	ENSSSCG00000002447	CPSF2	100	99.616	Sus_scrofa
ENSSTOG00000009528	CPSF2	100	96.424	ENSTGUG00000012571	-	100	96.424	Taeniopygia_guttata
ENSSTOG00000009528	CPSF2	100	84.791	ENSTRUG00000003742	cpsf2	100	84.791	Takifugu_rubripes
ENSSTOG00000009528	CPSF2	100	83.439	ENSTNIG00000012228	cpsf2	100	84.197	Tetraodon_nigroviridis
ENSSTOG00000009528	CPSF2	91	100.000	ENSTBEG00000004530	CPSF2	94	100.000	Tupaia_belangeri
ENSSTOG00000009528	CPSF2	88	100.000	ENSTTRG00000008697	CPSF2	88	100.000	Tursiops_truncatus
ENSSTOG00000009528	CPSF2	100	99.872	ENSUAMG00000028071	CPSF2	100	99.872	Ursus_americanus
ENSSTOG00000009528	CPSF2	100	99.872	ENSUMAG00000005029	CPSF2	100	99.872	Ursus_maritimus
ENSSTOG00000009528	CPSF2	99	99.744	ENSVPAG00000003503	CPSF2	100	99.744	Vicugna_pacos
ENSSTOG00000009528	CPSF2	100	99.744	ENSVVUG00000024642	CPSF2	100	99.744	Vulpes_vulpes
ENSSTOG00000009528	CPSF2	100	92.337	ENSXETG00000010289	cpsf2	100	92.337	Xenopus_tropicalis
ENSSTOG00000009528	CPSF2	100	85.932	ENSXCOG00000001764	cpsf2	100	85.932	Xiphophorus_couchianus
ENSSTOG00000009528	CPSF2	100	86.058	ENSXMAG00000017048	cpsf2	100	86.058	Xiphophorus_maculatus