EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSTOG00000009924 (Gene tree)
Gene ID: 101968210
Gene Symbol: VARS2
Alias: DKFZP434L1435|G7a|KIAA1885|VARS2L|VARSL
Full Name: valyl-tRNA synthetase 2%2C mitochondrial
Gene Type: protein_coding
Species: Ictidomys_tridecemlineatus
Status: putative
Strand: Plus strand
Length: 12692 bases
Position: chrJH393647.1:552839-565530
Accession: 101968210
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSTOP00000008920	tRNA-synt_1g	PF09334.11	5.2e-15	1	1
ENSSTOP00000029884	tRNA-synt_1g	PF09334.11	5.2e-15	1	1
ENSSTOP00000008920	Anticodon_1	PF08264.13	4.3e-30	1	1
ENSSTOP00000029884	Anticodon_1	PF08264.13	4.3e-30	1	1
ENSSTOP00000008920	tRNA-synt_1	PF00133.22	8.6e-183	1	1
ENSSTOP00000029884	tRNA-synt_1	PF00133.22	8.6e-183	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSTOT00000009942	VARS2-202	3790	XM_005341051	ENSSTOP00000008920	1064 (aa)	XP_005341108	I3MEJ2
ENSSTOT00000031399	VARS2-201	4268	-	ENSSTOP00000029884	1064 (aa)	-	I3MEJ2

Gene Model

Click here to download ENSSTOG00000009924's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSTOG00000009924's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSTOG00000009924	VARS2	91	51.408	ENSSTOG00000013112	VARS	81	49.903

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSTOG00000009924	VARS2	93	50.925	ENSAPOG00000007396	vars2	98	49.769	Acanthochromis_polyacanthus
ENSSTOG00000009924	VARS2	99	86.119	ENSAMEG00000012997	VARS2	97	86.119	Ailuropoda_melanoleuca
ENSSTOG00000009924	VARS2	98	50.047	ENSACIG00000004344	vars2	99	49.953	Amphilophus_citrinellus
ENSSTOG00000009924	VARS2	93	50.243	ENSAOCG00000000476	vars2	98	48.942	Amphiprion_ocellaris
ENSSTOG00000009924	VARS2	93	50.341	ENSAPEG00000008646	vars2	96	49.215	Amphiprion_percula
ENSSTOG00000009924	VARS2	93	51.280	ENSATEG00000012291	vars2	97	50.766	Anabas_testudineus
ENSSTOG00000009924	VARS2	97	58.634	ENSACAG00000022093	VARS2	98	57.929	Anolis_carolinensis
ENSSTOG00000009924	VARS2	100	87.876	ENSANAG00000038018	VARS2	100	87.876	Aotus_nancymaae
ENSSTOG00000009924	VARS2	98	49.535	ENSACLG00000018673	vars2	99	49.442	Astatotilapia_calliptera
ENSSTOG00000009924	VARS2	95	52.536	ENSAMXG00000017773	vars2	97	53.984	Astyanax_mexicanus
ENSSTOG00000009924	VARS2	99	88.341	ENSBTAG00000010698	VARS2	99	88.230	Bos_taurus
ENSSTOG00000009924	VARS2	100	88.252	ENSCJAG00000019826	VARS2	100	88.252	Callithrix_jacchus
ENSSTOG00000009924	VARS2	99	85.377	ENSCAFG00000000454	VARS2	99	85.377	Canis_familiaris
ENSSTOG00000009924	VARS2	87	85.961	ENSCAFG00020019387	VARS2	95	86.006	Canis_lupus_dingo
ENSSTOG00000009924	VARS2	99	88.140	ENSCHIG00000007847	VARS2	99	87.947	Capra_hircus
ENSSTOG00000009924	VARS2	100	88.252	ENSTSYG00000009904	VARS2	100	88.252	Carlito_syrichta
ENSSTOG00000009924	VARS2	88	85.499	ENSCAPG00000017770	VARS2	99	85.499	Cavia_aperea
ENSSTOG00000009924	VARS2	99	85.028	ENSCPOG00000021834	VARS2	99	85.028	Cavia_porcellus
ENSSTOG00000009924	VARS2	100	88.722	ENSCCAG00000037907	VARS2	100	88.722	Cebus_capucinus
ENSSTOG00000009924	VARS2	100	89.286	ENSCATG00000032554	VARS2	100	89.286	Cercocebus_atys
ENSSTOG00000009924	VARS2	99	84.717	ENSCLAG00000002889	VARS2	99	84.717	Chinchilla_lanigera
ENSSTOG00000009924	VARS2	100	89.098	ENSCSAG00000008327	VARS2	100	89.098	Chlorocebus_sabaeus
ENSSTOG00000009924	VARS2	90	61.237	ENSCPBG00000021502	VARS2	96	61.174	Chrysemys_picta_bellii
ENSSTOG00000009924	VARS2	100	89.098	ENSCANG00000014991	VARS2	99	89.098	Colobus_angolensis_palliatus
ENSSTOG00000009924	VARS2	98	84.718	ENSCGRG00001021535	Vars2	99	84.623	Cricetulus_griseus_chok1gshd
ENSSTOG00000009924	VARS2	98	84.718	ENSCGRG00000014112	Vars2	99	84.623	Cricetulus_griseus_crigri
ENSSTOG00000009924	VARS2	80	56.398	ENSCSEG00000015432	vars2	82	68.000	Cynoglossus_semilaevis
ENSSTOG00000009924	VARS2	63	52.283	ENSCVAG00000017765	vars2	94	52.135	Cyprinodon_variegatus
ENSSTOG00000009924	VARS2	96	52.069	ENSDARG00000056717	vars2	97	51.973	Danio_rerio
ENSSTOG00000009924	VARS2	79	87.723	ENSDORG00000008516	Vars2	93	87.723	Dipodomys_ordii
ENSSTOG00000009924	VARS2	99	75.024	ENSETEG00000014844	VARS2	99	75.024	Echinops_telfairi
ENSSTOG00000009924	VARS2	99	88.962	ENSEASG00005019997	VARS2	97	88.962	Equus_asinus_asinus
ENSSTOG00000009924	VARS2	99	90.000	ENSECAG00000018202	VARS2	99	90.000	Equus_caballus
ENSSTOG00000009924	VARS2	67	81.553	ENSEEUG00000012591	-	67	81.553	Erinaceus_europaeus
ENSSTOG00000009924	VARS2	92	52.750	ENSELUG00000017824	vars2	97	51.455	Esox_lucius
ENSSTOG00000009924	VARS2	99	87.170	ENSFCAG00000010531	VARS2	99	87.170	Felis_catus
ENSSTOG00000009924	VARS2	99	85.917	ENSFDAG00000017216	VARS2	99	85.917	Fukomys_damarensis
ENSSTOG00000009924	VARS2	85	51.705	ENSFHEG00000013932	vars2	92	50.955	Fundulus_heteroclitus
ENSSTOG00000009924	VARS2	88	55.929	ENSGMOG00000018960	vars2	99	55.824	Gadus_morhua
ENSSTOG00000009924	VARS2	83	49.148	ENSGAFG00000004737	vars2	88	49.027	Gambusia_affinis
ENSSTOG00000009924	VARS2	92	52.637	ENSGACG00000001464	vars2	99	52.535	Gasterosteus_aculeatus
ENSSTOG00000009924	VARS2	91	61.460	ENSGAGG00000011652	VARS2	99	61.359	Gopherus_agassizii
ENSSTOG00000009924	VARS2	100	89.004	ENSGGOG00000014587	VARS2	100	89.004	Gorilla_gorilla
ENSSTOG00000009924	VARS2	90	50.709	ENSHBUG00000002448	vars2	95	50.607	Haplochromis_burtoni
ENSSTOG00000009924	VARS2	99	84.151	ENSHGLG00000012886	VARS2	96	84.151	Heterocephalus_glaber_female
ENSSTOG00000009924	VARS2	99	83.962	ENSHGLG00100016535	VARS2	99	83.962	Heterocephalus_glaber_male
ENSSTOG00000009924	VARS2	70	48.105	ENSHCOG00000017907	vars2	95	50.980	Hippocampus_comes
ENSSTOG00000009924	VARS2	92	53.731	ENSIPUG00000015573	Vars2	97	52.457	Ictalurus_punctatus
ENSSTOG00000009924	VARS2	99	84.434	ENSJJAG00000011144	Vars2	99	84.434	Jaculus_jaculus
ENSSTOG00000009924	VARS2	93	51.165	ENSKMAG00000001393	vars2	97	50.756	Kryptolebias_marmoratus
ENSSTOG00000009924	VARS2	95	50.672	ENSLBEG00000011949	vars2	98	50.187	Labrus_bergylta
ENSSTOG00000009924	VARS2	52	62.883	ENSLBEG00000005480	-	82	62.410	Labrus_bergylta
ENSSTOG00000009924	VARS2	95	52.182	ENSLACG00000001576	-	99	52.279	Latimeria_chalumnae
ENSSTOG00000009924	VARS2	99	86.932	ENSLAFG00000015183	VARS2	99	86.932	Loxodonta_africana
ENSSTOG00000009924	VARS2	100	88.628	ENSMFAG00000042367	VARS2	100	88.628	Macaca_fascicularis
ENSSTOG00000009924	VARS2	100	88.628	ENSMMUG00000018609	VARS2	100	88.628	Macaca_mulatta
ENSSTOG00000009924	VARS2	100	88.534	ENSMNEG00000043163	VARS2	100	88.534	Macaca_nemestrina
ENSSTOG00000009924	VARS2	100	89.380	ENSMLEG00000041728	VARS2	97	89.380	Mandrillus_leucophaeus
ENSSTOG00000009924	VARS2	95	50.144	ENSMAMG00000020339	vars2	98	49.576	Mastacembelus_armatus
ENSSTOG00000009924	VARS2	98	49.442	ENSMZEG00005017669	vars2	99	49.349	Maylandia_zebra
ENSSTOG00000009924	VARS2	99	84.826	ENSMAUG00000018946	Vars2	99	84.826	Mesocricetus_auratus
ENSSTOG00000009924	VARS2	84	89.910	ENSMICG00000005365	VARS2	100	89.910	Microcebus_murinus
ENSSTOG00000009924	VARS2	93	87.758	ENSMOCG00000014607	Vars2	99	87.758	Microtus_ochrogaster
ENSSTOG00000009924	VARS2	93	50.495	ENSMMOG00000012122	vars2	98	49.480	Mola_mola
ENSSTOG00000009924	VARS2	99	74.270	ENSMODG00000015848	VARS2	99	74.270	Monodelphis_domestica
ENSSTOG00000009924	VARS2	89	53.015	ENSMALG00000009217	vars2	95	52.911	Monopterus_albus
ENSSTOG00000009924	VARS2	99	85.849	MGP_CAROLIEiJ_G0021529	Vars2	99	85.849	Mus_caroli
ENSSTOG00000009924	VARS2	99	85.660	ENSMUSG00000038838	Vars2	99	85.660	Mus_musculus
ENSSTOG00000009924	VARS2	99	86.038	MGP_PahariEiJ_G0020523	Vars2	99	86.038	Mus_pahari
ENSSTOG00000009924	VARS2	99	85.755	MGP_SPRETEiJ_G0022436	Vars2	99	85.755	Mus_spretus
ENSSTOG00000009924	VARS2	99	86.308	ENSMPUG00000011643	VARS2	99	86.308	Mustela_putorius_furo
ENSSTOG00000009924	VARS2	99	84.579	ENSMLUG00000002356	VARS2	97	84.579	Myotis_lucifugus
ENSSTOG00000009924	VARS2	98	79.278	ENSNGAG00000020607	Vars2	99	79.135	Nannospalax_galili
ENSSTOG00000009924	VARS2	60	48.485	ENSNBRG00000001624	vars2	57	50.552	Neolamprologus_brichardi
ENSSTOG00000009924	VARS2	100	85.432	ENSNLEG00000005625	VARS2	97	85.432	Nomascus_leucogenys
ENSSTOG00000009924	VARS2	78	73.667	ENSMEUG00000014475	VARS2	90	73.667	Notamacropus_eugenii
ENSSTOG00000009924	VARS2	90	82.743	ENSOPRG00000000682	VARS2	90	82.743	Ochotona_princeps
ENSSTOG00000009924	VARS2	99	82.846	ENSODEG00000017965	VARS2	99	82.846	Octodon_degus
ENSSTOG00000009924	VARS2	92	36.893	ENSONIG00000004734	vars2	74	55.607	Oreochromis_niloticus
ENSSTOG00000009924	VARS2	75	90.909	ENSOANG00000000398	-	98	90.909	Ornithorhynchus_anatinus
ENSSTOG00000009924	VARS2	99	80.538	ENSOCUG00000021496	VARS2	64	80.912	Oryctolagus_cuniculus
ENSSTOG00000009924	VARS2	92	51.976	ENSORLG00000010632	vars2	96	50.954	Oryzias_latipes
ENSSTOG00000009924	VARS2	94	51.506	ENSORLG00020018584	vars2	96	50.907	Oryzias_latipes_hni
ENSSTOG00000009924	VARS2	94	51.506	ENSORLG00015010408	vars2	96	50.906	Oryzias_latipes_hsok
ENSSTOG00000009924	VARS2	93	51.365	ENSOMEG00000008360	vars2	96	50.954	Oryzias_melastigma
ENSSTOG00000009924	VARS2	100	87.711	ENSOGAG00000006087	VARS2	97	87.711	Otolemur_garnettii
ENSSTOG00000009924	VARS2	99	86.825	ENSOARG00000010844	VARS2	98	86.642	Ovis_aries
ENSSTOG00000009924	VARS2	100	89.192	ENSPPAG00000041141	VARS2	100	89.192	Pan_paniscus
ENSSTOG00000009924	VARS2	99	86.792	ENSPPRG00000006751	VARS2	97	86.792	Panthera_pardus
ENSSTOG00000009924	VARS2	99	86.698	ENSPTIG00000017799	VARS2	98	87.726	Panthera_tigris_altaica
ENSSTOG00000009924	VARS2	100	89.192	ENSPTRG00000034497	VARS2	100	89.192	Pan_troglodytes
ENSSTOG00000009924	VARS2	100	89.192	ENSPANG00000018481	VARS2	100	89.545	Papio_anubis
ENSSTOG00000009924	VARS2	95	53.756	ENSPKIG00000011372	vars2	98	53.069	Paramormyrops_kingsleyae
ENSSTOG00000009924	VARS2	59	66.403	ENSPSIG00000006206	VARS2	92	65.741	Pelodiscus_sinensis
ENSSTOG00000009924	VARS2	97	52.117	ENSPMGG00000000465	vars2	98	52.026	Periophthalmus_magnuspinnatus
ENSSTOG00000009924	VARS2	99	85.849	ENSPEMG00000014691	Vars2	99	85.849	Peromyscus_maniculatus_bairdii
ENSSTOG00000009924	VARS2	99	76.087	ENSPCIG00000015040	VARS2	99	76.087	Phascolarctos_cinereus
ENSSTOG00000009924	VARS2	93	51.572	ENSPFOG00000017616	vars2	97	50.616	Poecilia_formosa
ENSSTOG00000009924	VARS2	93	51.224	ENSPLAG00000019778	vars2	99	49.170	Poecilia_latipinna
ENSSTOG00000009924	VARS2	93	51.322	ENSPMEG00000011123	vars2	96	50.821	Poecilia_mexicana
ENSSTOG00000009924	VARS2	89	47.071	ENSPREG00000014998	vars2	94	46.332	Poecilia_reticulata
ENSSTOG00000009924	VARS2	100	88.910	ENSPPYG00000016424	VARS2	100	88.910	Pongo_abelii
ENSSTOG00000009924	VARS2	84	80.634	ENSPCAG00000006946	VARS2	84	80.634	Procavia_capensis
ENSSTOG00000009924	VARS2	99	87.862	ENSPCOG00000014839	VARS2	97	87.862	Propithecus_coquereli
ENSSTOG00000009924	VARS2	100	86.372	ENSPVAG00000004197	VARS2	99	86.372	Pteropus_vampyrus
ENSSTOG00000009924	VARS2	82	58.065	ENSPNYG00000010314	vars2	100	58.065	Pundamilia_nyererei
ENSSTOG00000009924	VARS2	94	53.475	ENSPNAG00000026793	vars2	96	53.081	Pygocentrus_nattereri
ENSSTOG00000009924	VARS2	99	85.472	ENSRNOG00000000833	Vars2	99	85.472	Rattus_norvegicus
ENSSTOG00000009924	VARS2	100	89.004	ENSRBIG00000032725	VARS2	100	89.004	Rhinopithecus_bieti
ENSSTOG00000009924	VARS2	100	88.910	ENSRROG00000043847	VARS2	100	88.910	Rhinopithecus_roxellana
ENSSTOG00000009924	VARS2	100	86.096	ENSSBOG00000033240	VARS2	98	86.096	Saimiri_boliviensis_boliviensis
ENSSTOG00000009924	VARS2	99	74.669	ENSSHAG00000009307	VARS2	100	74.669	Sarcophilus_harrisii
ENSSTOG00000009924	VARS2	96	52.517	ENSSFOG00015016187	vars2	96	52.327	Scleropages_formosus
ENSSTOG00000009924	VARS2	93	52.372	ENSSMAG00000020842	vars2	97	51.724	Scophthalmus_maximus
ENSSTOG00000009924	VARS2	93	51.076	ENSSDUG00000011598	vars2	97	50.614	Seriola_dumerili
ENSSTOG00000009924	VARS2	90	52.049	ENSSLDG00000015492	vars2	97	50.095	Seriola_lalandi_dorsalis
ENSSTOG00000009924	VARS2	57	88.889	ENSSARG00000003786	-	69	88.889	Sorex_araneus
ENSSTOG00000009924	VARS2	88	59.552	ENSSPUG00000014700	VARS2	94	59.552	Sphenodon_punctatus
ENSSTOG00000009924	VARS2	93	49.454	ENSSPAG00000004654	vars2	97	48.623	Stegastes_partitus
ENSSTOG00000009924	VARS2	99	87.819	ENSSSCG00000001384	VARS2	99	88.283	Sus_scrofa
ENSSTOG00000009924	VARS2	94	52.381	ENSTRUG00000005264	vars2	96	52.825	Takifugu_rubripes
ENSSTOG00000009924	VARS2	99	50.514	ENSTNIG00000005916	vars2	99	50.884	Tetraodon_nigroviridis
ENSSTOG00000009924	VARS2	53	86.850	ENSTBEG00000007976	-	53	86.850	Tupaia_belangeri
ENSSTOG00000009924	VARS2	100	75.940	ENSTTRG00000012243	VARS2	100	75.940	Tursiops_truncatus
ENSSTOG00000009924	VARS2	99	86.038	ENSUAMG00000026124	VARS2	99	87.486	Ursus_americanus
ENSSTOG00000009924	VARS2	99	86.874	ENSUMAG00000019894	VARS2	99	86.874	Ursus_maritimus
ENSSTOG00000009924	VARS2	99	86.132	ENSVVUG00000010754	VARS2	95	86.132	Vulpes_vulpes
ENSSTOG00000009924	VARS2	89	55.348	ENSXETG00000003036	vars2	99	55.348	Xenopus_tropicalis
ENSSTOG00000009924	VARS2	90	53.051	ENSXCOG00000003455	vars2	97	51.074	Xiphophorus_couchianus
ENSSTOG00000009924	VARS2	93	51.417	ENSXMAG00000013523	vars2	98	49.907	Xiphophorus_maculatus