EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSTOG00000010096 (Gene tree)
Gene ID: 101961609
Gene Symbol: APEX1
Alias: APE|APE-1|APEN|APEX|APX|HAP1|REF-1|REF1
Full Name: apurinic/apyrimidinic endodeoxyribonuclease 1
Gene Type: protein_coding
Species: Ictidomys_tridecemlineatus
Status: putative
Strand: Plus strand
Length: 2816 bases
Position: chrJH393687.1:666523-669338
Accession: 101961609
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSTOP00000009066	Exo_endo_phos	PF03372.23	2e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSTOT00000010106	APEX1-201	1379	XM_005341405	ENSSTOP00000009066	318 (aa)	XP_005341462	I3MEU6

Gene Model

Click here to download ENSSTOG00000010096's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSTOG00000010096's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSTOG00000010096	APEX1	100	93.711	ENSG00000100823	APEX1	100	93.711	Homo_sapiens
ENSSTOG00000010096	APEX1	88	69.892	ENSAPOG00000017002	apex1	91	69.892	Acanthochromis_polyacanthus
ENSSTOG00000010096	APEX1	100	95.283	ENSAMEG00000005418	APEX1	100	95.283	Ailuropoda_melanoleuca
ENSSTOG00000010096	APEX1	87	71.223	ENSACIG00000010653	apex1	94	71.326	Amphilophus_citrinellus
ENSSTOG00000010096	APEX1	88	69.534	ENSAOCG00000009649	apex1	90	69.534	Amphiprion_ocellaris
ENSSTOG00000010096	APEX1	88	69.534	ENSAPEG00000021453	apex1	90	69.534	Amphiprion_percula
ENSSTOG00000010096	APEX1	99	67.405	ENSATEG00000002883	apex1	97	67.722	Anabas_testudineus
ENSSTOG00000010096	APEX1	100	69.876	ENSACAG00000008099	APEX1	100	69.876	Anolis_carolinensis
ENSSTOG00000010096	APEX1	100	94.025	ENSANAG00000030117	APEX1	100	94.025	Aotus_nancymaae
ENSSTOG00000010096	APEX1	87	72.101	ENSACLG00000018441	apex1	99	67.089	Astatotilapia_calliptera
ENSSTOG00000010096	APEX1	100	66.875	ENSAMXG00000034699	apex1	100	65.938	Astyanax_mexicanus
ENSSTOG00000010096	APEX1	100	93.711	ENSBTAG00000002745	APEX1	100	93.711	Bos_taurus
ENSSTOG00000010096	APEX1	84	44.649	WBGene00001372	exo-3	93	44.649	Caenorhabditis_elegans
ENSSTOG00000010096	APEX1	100	94.340	ENSCJAG00000009726	APEX1	100	94.340	Callithrix_jacchus
ENSSTOG00000010096	APEX1	100	94.025	ENSCAFG00000032033	APEX1	100	94.025	Canis_familiaris
ENSSTOG00000010096	APEX1	100	94.025	ENSCAFG00020014377	-	100	94.025	Canis_lupus_dingo
ENSSTOG00000010096	APEX1	54	90.116	ENSCAFG00020023002	-	96	90.116	Canis_lupus_dingo
ENSSTOG00000010096	APEX1	98	74.679	ENSCHIG00000014537	-	99	74.679	Capra_hircus
ENSSTOG00000010096	APEX1	100	93.082	ENSCHIG00000007298	-	100	93.082	Capra_hircus
ENSSTOG00000010096	APEX1	100	94.654	ENSTSYG00000034813	APEX1	100	94.654	Carlito_syrichta
ENSSTOG00000010096	APEX1	85	87.823	ENSCAPG00000016235	APEX1	91	96.610	Cavia_aperea
ENSSTOG00000010096	APEX1	100	94.654	ENSCPOG00000030909	APEX1	100	94.654	Cavia_porcellus
ENSSTOG00000010096	APEX1	100	80.503	ENSCCAG00000031931	-	100	80.503	Cebus_capucinus
ENSSTOG00000010096	APEX1	100	94.340	ENSCCAG00000033056	-	100	94.340	Cebus_capucinus
ENSSTOG00000010096	APEX1	100	93.711	ENSCATG00000015580	APEX1	100	93.711	Cercocebus_atys
ENSSTOG00000010096	APEX1	100	94.969	ENSCLAG00000001002	APEX1	100	94.969	Chinchilla_lanigera
ENSSTOG00000010096	APEX1	100	94.025	ENSCSAG00000016670	-	100	94.025	Chlorocebus_sabaeus
ENSSTOG00000010096	APEX1	100	94.025	ENSCSAG00000016685	-	100	94.025	Chlorocebus_sabaeus
ENSSTOG00000010096	APEX1	100	72.100	ENSCPBG00000009567	APEX1	100	72.100	Chrysemys_picta_bellii
ENSSTOG00000010096	APEX1	92	55.034	ENSCING00000008137	-	84	58.113	Ciona_intestinalis
ENSSTOG00000010096	APEX1	90	48.667	ENSCSAVG00000007144	-	100	53.282	Ciona_savignyi
ENSSTOG00000010096	APEX1	100	93.711	ENSCANG00000030726	APEX1	100	93.711	Colobus_angolensis_palliatus
ENSSTOG00000010096	APEX1	100	90.881	ENSCGRG00001017046	Apex1	100	90.881	Cricetulus_griseus_chok1gshd
ENSSTOG00000010096	APEX1	100	90.881	ENSCGRG00000008984	Apex1	100	90.881	Cricetulus_griseus_crigri
ENSSTOG00000010096	APEX1	99	64.669	ENSCSEG00000017499	apex1	99	63.836	Cynoglossus_semilaevis
ENSSTOG00000010096	APEX1	99	66.456	ENSCVAG00000022075	apex1	99	66.456	Cyprinodon_variegatus
ENSSTOG00000010096	APEX1	100	66.038	ENSDARG00000045843	apex1	100	66.038	Danio_rerio
ENSSTOG00000010096	APEX1	100	89.623	ENSDNOG00000042234	APEX1	95	89.623	Dasypus_novemcinctus
ENSSTOG00000010096	APEX1	100	94.340	ENSDORG00000001616	Apex1	100	94.340	Dipodomys_ordii
ENSSTOG00000010096	APEX1	100	92.453	ENSETEG00000004855	-	100	92.453	Echinops_telfairi
ENSSTOG00000010096	APEX1	75	62.762	ENSEBUG00000000622	-	92	62.762	Eptatretus_burgeri
ENSSTOG00000010096	APEX1	100	95.597	ENSEASG00005017489	APEX1	74	95.597	Equus_asinus_asinus
ENSSTOG00000010096	APEX1	100	95.597	ENSECAG00000022325	APEX1	82	95.597	Equus_caballus
ENSSTOG00000010096	APEX1	91	91.667	ENSEEUG00000012569	APEX1	100	91.667	Erinaceus_europaeus
ENSSTOG00000010096	APEX1	100	65.094	ENSELUG00000021706	apex1	100	65.312	Esox_lucius
ENSSTOG00000010096	APEX1	100	95.912	ENSFCAG00000030869	APEX1	100	95.912	Felis_catus
ENSSTOG00000010096	APEX1	100	94.025	ENSFDAG00000006120	APEX1	100	94.025	Fukomys_damarensis
ENSSTOG00000010096	APEX1	99	67.722	ENSFHEG00000009031	apex1	83	67.722	Fundulus_heteroclitus
ENSSTOG00000010096	APEX1	99	62.025	ENSGMOG00000007943	apex1	99	62.025	Gadus_morhua
ENSSTOG00000010096	APEX1	99	67.405	ENSGAFG00000005311	apex1	99	67.405	Gambusia_affinis
ENSSTOG00000010096	APEX1	99	65.190	ENSGACG00000019497	apex1	99	68.797	Gasterosteus_aculeatus
ENSSTOG00000010096	APEX1	100	71.473	ENSGAGG00000014999	APEX1	100	71.473	Gopherus_agassizii
ENSSTOG00000010096	APEX1	100	94.025	ENSGGOG00000002128	APEX1	100	94.025	Gorilla_gorilla
ENSSTOG00000010096	APEX1	99	66.772	ENSHBUG00000005894	apex1	99	67.089	Haplochromis_burtoni
ENSSTOG00000010096	APEX1	100	94.654	ENSHGLG00000002848	APEX1	100	94.654	Heterocephalus_glaber_female
ENSSTOG00000010096	APEX1	100	94.654	ENSHGLG00100017878	APEX1	100	94.654	Heterocephalus_glaber_male
ENSSTOG00000010096	APEX1	99	66.352	ENSHCOG00000009961	apex1	99	65.615	Hippocampus_comes
ENSSTOG00000010096	APEX1	100	67.712	ENSIPUG00000005799	apex1	100	66.771	Ictalurus_punctatus
ENSSTOG00000010096	APEX1	100	79.874	ENSJJAG00000020465	-	96	83.893	Jaculus_jaculus
ENSSTOG00000010096	APEX1	100	83.648	ENSJJAG00000003660	-	100	83.648	Jaculus_jaculus
ENSSTOG00000010096	APEX1	100	93.082	ENSJJAG00000012067	-	100	93.082	Jaculus_jaculus
ENSSTOG00000010096	APEX1	99	66.772	ENSKMAG00000021171	apex1	99	66.772	Kryptolebias_marmoratus
ENSSTOG00000010096	APEX1	88	69.176	ENSLBEG00000010248	apex1	99	64.856	Labrus_bergylta
ENSSTOG00000010096	APEX1	100	66.250	ENSLACG00000008617	APEX1	100	65.938	Latimeria_chalumnae
ENSSTOG00000010096	APEX1	100	65.217	ENSLOCG00000015516	apex1	99	65.409	Lepisosteus_oculatus
ENSSTOG00000010096	APEX1	100	92.138	ENSLAFG00000021872	APEX1	100	92.138	Loxodonta_africana
ENSSTOG00000010096	APEX1	100	93.711	ENSMFAG00000002565	APEX1	100	93.711	Macaca_fascicularis
ENSSTOG00000010096	APEX1	100	93.711	ENSMMUG00000048039	APEX1	100	93.711	Macaca_mulatta
ENSSTOG00000010096	APEX1	100	93.711	ENSMNEG00000036944	APEX1	100	93.711	Macaca_nemestrina
ENSSTOG00000010096	APEX1	100	93.711	ENSMLEG00000042125	APEX1	100	93.711	Mandrillus_leucophaeus
ENSSTOG00000010096	APEX1	99	67.089	ENSMAMG00000023526	apex1	99	67.089	Mastacembelus_armatus
ENSSTOG00000010096	APEX1	87	72.101	ENSMZEG00005014187	apex1	99	67.089	Maylandia_zebra
ENSSTOG00000010096	APEX1	100	91.824	ENSMAUG00000013994	Apex1	100	91.824	Mesocricetus_auratus
ENSSTOG00000010096	APEX1	100	95.597	ENSMICG00000043554	APEX1	100	95.597	Microcebus_murinus
ENSSTOG00000010096	APEX1	100	91.509	ENSMOCG00000013721	Apex1	100	91.509	Microtus_ochrogaster
ENSSTOG00000010096	APEX1	88	67.857	ENSMMOG00000010031	apex1	97	62.696	Mola_mola
ENSSTOG00000010096	APEX1	100	83.438	ENSMODG00000007125	APEX1	100	84.062	Monodelphis_domestica
ENSSTOG00000010096	APEX1	88	64.516	ENSMALG00000011699	apex1	75	64.516	Monopterus_albus
ENSSTOG00000010096	APEX1	99	93.691	MGP_CAROLIEiJ_G0019209	Apex1	99	93.691	Mus_caroli
ENSSTOG00000010096	APEX1	100	94.340	ENSMUSG00000035960	Apex1	100	94.340	Mus_musculus
ENSSTOG00000010096	APEX1	100	93.711	MGP_PahariEiJ_G0030232	Apex1	100	93.711	Mus_pahari
ENSSTOG00000010096	APEX1	100	94.340	MGP_SPRETEiJ_G0020101	Apex1	100	94.340	Mus_spretus
ENSSTOG00000010096	APEX1	100	93.750	ENSMLUG00000028957	APEX1	100	93.750	Myotis_lucifugus
ENSSTOG00000010096	APEX1	100	71.069	ENSNGAG00000021748	-	99	71.069	Nannospalax_galili
ENSSTOG00000010096	APEX1	100	93.396	ENSNGAG00000002725	-	100	93.396	Nannospalax_galili
ENSSTOG00000010096	APEX1	87	71.739	ENSNBRG00000005334	apex1	91	66.772	Neolamprologus_brichardi
ENSSTOG00000010096	APEX1	100	94.025	ENSNLEG00000010839	APEX1	100	94.025	Nomascus_leucogenys
ENSSTOG00000010096	APEX1	100	85.535	ENSMEUG00000014519	APEX1	100	84.013	Notamacropus_eugenii
ENSSTOG00000010096	APEX1	100	93.396	ENSOPRG00000014029	APEX1	100	92.767	Ochotona_princeps
ENSSTOG00000010096	APEX1	100	94.654	ENSODEG00000001703	-	100	94.654	Octodon_degus
ENSSTOG00000010096	APEX1	100	71.605	ENSODEG00000006583	-	100	71.605	Octodon_degus
ENSSTOG00000010096	APEX1	97	76.052	ENSODEG00000004777	-	99	76.052	Octodon_degus
ENSSTOG00000010096	APEX1	87	72.302	ENSONIG00000012089	apex1	99	67.405	Oreochromis_niloticus
ENSSTOG00000010096	APEX1	90	82.456	ENSOANG00000008836	APEX1	80	77.778	Ornithorhynchus_anatinus
ENSSTOG00000010096	APEX1	100	94.340	ENSOCUG00000005022	APEX1	100	94.340	Oryctolagus_cuniculus
ENSSTOG00000010096	APEX1	99	67.296	ENSORLG00000012378	apex1	99	67.610	Oryzias_latipes
ENSSTOG00000010096	APEX1	99	67.296	ENSORLG00020021371	apex1	99	67.610	Oryzias_latipes_hni
ENSSTOG00000010096	APEX1	99	67.296	ENSORLG00015020089	apex1	99	67.610	Oryzias_latipes_hsok
ENSSTOG00000010096	APEX1	99	66.981	ENSOMEG00000018876	apex1	99	66.981	Oryzias_melastigma
ENSSTOG00000010096	APEX1	100	95.283	ENSOGAG00000013335	-	100	95.283	Otolemur_garnettii
ENSSTOG00000010096	APEX1	98	84.936	ENSOGAG00000029355	-	100	84.936	Otolemur_garnettii
ENSSTOG00000010096	APEX1	100	92.138	ENSOARG00000019740	-	100	92.138	Ovis_aries
ENSSTOG00000010096	APEX1	99	78.481	ENSOARG00000014424	-	100	78.481	Ovis_aries
ENSSTOG00000010096	APEX1	97	89.286	ENSOARG00000001876	-	100	89.286	Ovis_aries
ENSSTOG00000010096	APEX1	100	94.025	ENSPPAG00000038760	APEX1	100	94.025	Pan_paniscus
ENSSTOG00000010096	APEX1	100	95.597	ENSPPRG00000011794	APEX1	100	95.597	Panthera_pardus
ENSSTOG00000010096	APEX1	100	95.912	ENSPTIG00000014829	APEX1	100	95.912	Panthera_tigris_altaica
ENSSTOG00000010096	APEX1	100	94.025	ENSPTRG00000006093	APEX1	100	94.025	Pan_troglodytes
ENSSTOG00000010096	APEX1	100	93.711	ENSPANG00000022757	APEX1	100	93.711	Papio_anubis
ENSSTOG00000010096	APEX1	87	68.953	ENSPKIG00000003504	apex1	100	64.798	Paramormyrops_kingsleyae
ENSSTOG00000010096	APEX1	76	67.490	ENSPMGG00000016596	apex1	73	67.490	Periophthalmus_magnuspinnatus
ENSSTOG00000010096	APEX1	100	93.396	ENSPEMG00000019097	Apex1	100	93.396	Peromyscus_maniculatus_bairdii
ENSSTOG00000010096	APEX1	94	66.333	ENSPMAG00000007275	-	95	68.683	Petromyzon_marinus
ENSSTOG00000010096	APEX1	100	82.759	ENSPCIG00000023274	APEX1	100	84.735	Phascolarctos_cinereus
ENSSTOG00000010096	APEX1	88	72.760	ENSPFOG00000004178	apex1	99	67.405	Poecilia_formosa
ENSSTOG00000010096	APEX1	88	72.401	ENSPLAG00000012779	apex1	99	67.823	Poecilia_latipinna
ENSSTOG00000010096	APEX1	88	72.760	ENSPMEG00000019623	apex1	99	67.405	Poecilia_mexicana
ENSSTOG00000010096	APEX1	88	72.401	ENSPREG00000014298	apex1	99	67.089	Poecilia_reticulata
ENSSTOG00000010096	APEX1	100	94.025	ENSPPYG00000005565	APEX1	100	94.025	Pongo_abelii
ENSSTOG00000010096	APEX1	100	90.566	ENSPCAG00000010376	APEX1	100	90.566	Procavia_capensis
ENSSTOG00000010096	APEX1	100	95.597	ENSPCOG00000021564	APEX1	100	95.597	Propithecus_coquereli
ENSSTOG00000010096	APEX1	100	94.688	ENSPVAG00000010736	APEX1	100	94.688	Pteropus_vampyrus
ENSSTOG00000010096	APEX1	87	72.101	ENSPNYG00000023940	apex1	99	67.089	Pundamilia_nyererei
ENSSTOG00000010096	APEX1	93	66.554	ENSPNAG00000020897	apex1	96	65.424	Pygocentrus_nattereri
ENSSTOG00000010096	APEX1	100	93.396	ENSRNOG00000009663	Apex1	100	93.396	Rattus_norvegicus
ENSSTOG00000010096	APEX1	100	93.711	ENSRBIG00000038325	APEX1	99	93.711	Rhinopithecus_bieti
ENSSTOG00000010096	APEX1	100	94.340	ENSSBOG00000018921	-	100	94.340	Saimiri_boliviensis_boliviensis
ENSSTOG00000010096	APEX1	100	79.245	ENSSBOG00000031372	-	100	79.365	Saimiri_boliviensis_boliviensis
ENSSTOG00000010096	APEX1	100	81.481	ENSSHAG00000013524	APEX1	100	81.481	Sarcophilus_harrisii
ENSSTOG00000010096	APEX1	100	62.579	ENSSFOG00015001948	apex1	100	61.635	Scleropages_formosus
ENSSTOG00000010096	APEX1	87	69.065	ENSSMAG00000013348	apex1	99	64.873	Scophthalmus_maximus
ENSSTOG00000010096	APEX1	99	65.823	ENSSDUG00000016377	apex1	99	65.823	Seriola_dumerili
ENSSTOG00000010096	APEX1	99	66.139	ENSSLDG00000023005	apex1	99	66.139	Seriola_lalandi_dorsalis
ENSSTOG00000010096	APEX1	89	72.183	ENSSPUG00000000531	APEX1	96	72.183	Sphenodon_punctatus
ENSSTOG00000010096	APEX1	99	66.139	ENSSPAG00000000458	apex1	99	66.139	Stegastes_partitus
ENSSTOG00000010096	APEX1	100	54.321	ENSSSCG00000039705	-	100	54.321	Sus_scrofa
ENSSTOG00000010096	APEX1	100	93.711	ENSSSCG00000040060	-	100	93.711	Sus_scrofa
ENSSTOG00000010096	APEX1	74	59.746	ENSTGUG00000014378	APEX1	100	59.746	Taeniopygia_guttata
ENSSTOG00000010096	APEX1	87	68.345	ENSTRUG00000004268	apex1	95	63.578	Takifugu_rubripes
ENSSTOG00000010096	APEX1	99	64.873	ENSTNIG00000005778	apex1	99	64.873	Tetraodon_nigroviridis
ENSSTOG00000010096	APEX1	100	91.195	ENSTBEG00000006405	APEX1	100	91.195	Tupaia_belangeri
ENSSTOG00000010096	APEX1	74	94.068	ENSTTRG00000007860	APEX1	100	94.068	Tursiops_truncatus
ENSSTOG00000010096	APEX1	100	94.969	ENSUAMG00000010457	APEX1	100	94.969	Ursus_americanus
ENSSTOG00000010096	APEX1	100	94.969	ENSUMAG00000009178	APEX1	100	94.969	Ursus_maritimus
ENSSTOG00000010096	APEX1	74	90.678	ENSVPAG00000005083	APEX1	100	90.678	Vicugna_pacos
ENSSTOG00000010096	APEX1	100	94.025	ENSVVUG00000009010	APEX1	100	94.025	Vulpes_vulpes
ENSSTOG00000010096	APEX1	100	67.290	ENSXETG00000024773	apex1	100	67.290	Xenopus_tropicalis
ENSSTOG00000010096	APEX1	88	72.401	ENSXCOG00000015233	apex1	99	67.722	Xiphophorus_couchianus
ENSSTOG00000010096	APEX1	88	72.401	ENSXMAG00000006195	apex1	99	67.722	Xiphophorus_maculatus