EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSTOG00000010234 (Gene tree)
Gene ID: 101962803
Gene Symbol: LSG1
Alias: FLJ11301
Full Name: large 60S subunit nuclear export GTPase 1
Gene Type: protein_coding
Species: Ictidomys_tridecemlineatus
Status: putative
Strand: Plus strand
Length: 37919 bases
Position: chrJH393521.1:148798-186716
Accession: 25652
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSTOP00000009179	MMR_HSR1	PF01926.23	8.1e-14	1	1
ENSSTOP00000027086	MMR_HSR1	PF01926.23	9e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSTOT00000010231	LSG1-202	1593	-	ENSSTOP00000009179	530 (aa)	-	I3MF32
ENSSTOT00000038250	LSG1-201	1602	XM_013364292	ENSSTOP00000027086	533 (aa)	-	A0A287D0H4

Gene Model

Click here to download ENSSTOG00000010234's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSTOG00000010234's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSTOG00000010234	LSG1	100	82.474	ENSG00000041802	LSG1	96	78.246	Homo_sapiens
ENSSTOG00000010234	LSG1	92	59.443	ENSAPOG00000009694	lsg1	75	58.730	Acanthochromis_polyacanthus
ENSSTOG00000010234	LSG1	99	76.693	ENSAMEG00000009343	LSG1	81	75.100	Ailuropoda_melanoleuca
ENSSTOG00000010234	LSG1	92	59.681	ENSACIG00000012406	lsg1	75	58.052	Amphilophus_citrinellus
ENSSTOG00000010234	LSG1	92	59.163	ENSAOCG00000016066	lsg1	75	58.532	Amphiprion_ocellaris
ENSSTOG00000010234	LSG1	92	58.964	ENSAPEG00000003252	lsg1	75	58.367	Amphiprion_percula
ENSSTOG00000010234	LSG1	92	59.880	ENSATEG00000011794	lsg1	75	59.681	Anabas_testudineus
ENSSTOG00000010234	LSG1	92	58.071	ENSACAG00000004222	LSG1	80	56.890	Anolis_carolinensis
ENSSTOG00000010234	LSG1	100	83.505	ENSANAG00000021153	LSG1	89	83.505	Aotus_nancymaae
ENSSTOG00000010234	LSG1	92	59.881	ENSACLG00000000520	lsg1	75	57.534	Astatotilapia_calliptera
ENSSTOG00000010234	LSG1	92	59.369	ENSAMXG00000008271	lsg1	76	58.730	Astyanax_mexicanus
ENSSTOG00000010234	LSG1	97	79.588	ENSBTAG00000008461	LSG1	83	76.505	Bos_taurus
ENSSTOG00000010234	LSG1	63	50.510	WBGene00016907	C53H9.2	68	50.467	Caenorhabditis_elegans
ENSSTOG00000010234	LSG1	100	83.299	ENSCJAG00000013962	LSG1	89	83.299	Callithrix_jacchus
ENSSTOG00000010234	LSG1	92	79.042	ENSCAFG00000013445	LSG1	80	76.846	Canis_familiaris
ENSSTOG00000010234	LSG1	92	78.571	ENSCAFG00020002216	LSG1	80	76.389	Canis_lupus_dingo
ENSSTOG00000010234	LSG1	99	78.800	ENSCHIG00000015769	LSG1	81	78.800	Capra_hircus
ENSSTOG00000010234	LSG1	99	87.879	ENSTSYG00000001447	LSG1	81	87.879	Carlito_syrichta
ENSSTOG00000010234	LSG1	93	69.583	ENSCAPG00000009856	LSG1	79	68.588	Cavia_aperea
ENSSTOG00000010234	LSG1	100	83.925	ENSCCAG00000035744	LSG1	89	82.046	Cebus_capucinus
ENSSTOG00000010234	LSG1	99	81.818	ENSCATG00000042060	LSG1	82	81.818	Cercocebus_atys
ENSSTOG00000010234	LSG1	99	81.637	ENSCSAG00000008796	LSG1	74	79.840	Chlorocebus_sabaeus
ENSSTOG00000010234	LSG1	92	64.554	ENSCPBG00000015941	LSG1	63	63.762	Chrysemys_picta_bellii
ENSSTOG00000010234	LSG1	54	61.579	ENSCING00000007079	-	57	61.579	Ciona_intestinalis
ENSSTOG00000010234	LSG1	50	64.935	ENSCSAVG00000002514	-	55	64.935	Ciona_savignyi
ENSSTOG00000010234	LSG1	99	81.038	ENSCANG00000030709	LSG1	82	79.242	Colobus_angolensis_palliatus
ENSSTOG00000010234	LSG1	99	78.884	ENSCGRG00001019846	Lsg1	81	79.283	Cricetulus_griseus_chok1gshd
ENSSTOG00000010234	LSG1	99	78.884	ENSCGRG00000014617	Lsg1	81	79.283	Cricetulus_griseus_crigri
ENSSTOG00000010234	LSG1	92	57.367	ENSCSEG00000008522	lsg1	75	57.058	Cynoglossus_semilaevis
ENSSTOG00000010234	LSG1	92	60.922	ENSCVAG00000002484	lsg1	75	59.604	Cyprinodon_variegatus
ENSSTOG00000010234	LSG1	92	60.800	ENSDARG00000015352	lsg1	75	60.437	Danio_rerio
ENSSTOG00000010234	LSG1	99	78.788	ENSDNOG00000006224	LSG1	81	78.788	Dasypus_novemcinctus
ENSSTOG00000010234	LSG1	71	64.179	FBgn0266284	Ns3	64	56.250	Drosophila_melanogaster
ENSSTOG00000010234	LSG1	99	75.758	ENSETEG00000003888	LSG1	81	75.758	Echinops_telfairi
ENSSTOG00000010234	LSG1	90	56.531	ENSEBUG00000003119	lsg1	70	55.332	Eptatretus_burgeri
ENSSTOG00000010234	LSG1	99	81.673	ENSEASG00005000678	LSG1	80	81.481	Equus_asinus_asinus
ENSSTOG00000010234	LSG1	99	81.673	ENSECAG00000017659	LSG1	81	79.681	Equus_caballus
ENSSTOG00000010234	LSG1	84	81.818	ENSEEUG00000015217	LSG1	68	81.818	Erinaceus_europaeus
ENSSTOG00000010234	LSG1	92	58.200	ENSELUG00000023973	lsg1	75	57.200	Esox_lucius
ENSSTOG00000010234	LSG1	99	80.040	ENSFCAG00000024957	LSG1	81	77.844	Felis_catus
ENSSTOG00000010234	LSG1	92	64.822	ENSFALG00000007210	LSG1	77	63.636	Ficedula_albicollis
ENSSTOG00000010234	LSG1	99	78.788	ENSFDAG00000017373	LSG1	81	78.788	Fukomys_damarensis
ENSSTOG00000010234	LSG1	92	60.887	ENSFHEG00000003680	lsg1	75	60.887	Fundulus_heteroclitus
ENSSTOG00000010234	LSG1	74	68.543	ENSGMOG00000015834	lsg1	63	68.543	Gadus_morhua
ENSSTOG00000010234	LSG1	92	64.016	ENSGALG00000007058	LSG1	67	63.419	Gallus_gallus
ENSSTOG00000010234	LSG1	92	60.852	ENSGAFG00000015831	lsg1	74	60.324	Gambusia_affinis
ENSSTOG00000010234	LSG1	92	58.532	ENSGACG00000009323	lsg1	75	58.103	Gasterosteus_aculeatus
ENSSTOG00000010234	LSG1	100	82.887	ENSGGOG00000000520	LSG1	90	80.204	Gorilla_gorilla
ENSSTOG00000010234	LSG1	92	59.802	ENSHBUG00000005659	lsg1	75	58.648	Haplochromis_burtoni
ENSSTOG00000010234	LSG1	99	84.848	ENSHGLG00000017390	LSG1	80	84.848	Heterocephalus_glaber_female
ENSSTOG00000010234	LSG1	99	84.848	ENSHGLG00100018587	LSG1	80	84.848	Heterocephalus_glaber_male
ENSSTOG00000010234	LSG1	92	60.161	ENSHCOG00000016848	lsg1	75	60.121	Hippocampus_comes
ENSSTOG00000010234	LSG1	92	59.245	ENSIPUG00000008631	lsg1	75	59.245	Ictalurus_punctatus
ENSSTOG00000010234	LSG1	99	75.842	ENSJJAG00000015513	Lsg1	80	75.665	Jaculus_jaculus
ENSSTOG00000010234	LSG1	92	57.800	ENSKMAG00000009681	lsg1	74	57.000	Kryptolebias_marmoratus
ENSSTOG00000010234	LSG1	92	57.800	ENSLBEG00000024261	lsg1	74	56.886	Labrus_bergylta
ENSSTOG00000010234	LSG1	90	62.245	ENSLACG00000013399	LSG1	74	59.681	Latimeria_chalumnae
ENSSTOG00000010234	LSG1	92	60.317	ENSLOCG00000004918	lsg1	75	59.841	Lepisosteus_oculatus
ENSSTOG00000010234	LSG1	99	79.283	ENSLAFG00000012919	-	81	77.490	Loxodonta_africana
ENSSTOG00000010234	LSG1	99	81.818	ENSMFAG00000039903	LSG1	82	81.818	Macaca_fascicularis
ENSSTOG00000010234	LSG1	99	81.818	ENSMMUG00000010708	LSG1	81	81.818	Macaca_mulatta
ENSSTOG00000010234	LSG1	99	81.818	ENSMNEG00000031538	LSG1	82	81.818	Macaca_nemestrina
ENSSTOG00000010234	LSG1	99	81.818	ENSMLEG00000041184	LSG1	82	81.818	Mandrillus_leucophaeus
ENSSTOG00000010234	LSG1	92	58.614	ENSMAMG00000000470	lsg1	75	58.218	Mastacembelus_armatus
ENSSTOG00000010234	LSG1	92	60.000	ENSMZEG00005017865	lsg1	75	58.847	Maylandia_zebra
ENSSTOG00000010234	LSG1	92	64.016	ENSMGAG00000007050	LSG1	86	64.016	Meleagris_gallopavo
ENSSTOG00000010234	LSG1	88	77.803	ENSMAUG00000016976	Lsg1	73	78.261	Mesocricetus_auratus
ENSSTOG00000010234	LSG1	99	81.673	ENSMICG00000049087	LSG1	81	79.880	Microcebus_murinus
ENSSTOG00000010234	LSG1	99	81.818	ENSMOCG00000022136	Lsg1	81	81.818	Microtus_ochrogaster
ENSSTOG00000010234	LSG1	74	72.185	ENSMMOG00000008884	lsg1	71	72.185	Mola_mola
ENSSTOG00000010234	LSG1	92	56.773	ENSMODG00000019828	LSG1	78	55.378	Monodelphis_domestica
ENSSTOG00000010234	LSG1	99	81.818	MGP_CAROLIEiJ_G0020648	Lsg1	81	81.818	Mus_caroli
ENSSTOG00000010234	LSG1	99	81.818	ENSMUSG00000022538	Lsg1	81	81.818	Mus_musculus
ENSSTOG00000010234	LSG1	93	76.846	MGP_PahariEiJ_G0016352	Lsg1	81	79.412	Mus_pahari
ENSSTOG00000010234	LSG1	99	81.818	MGP_SPRETEiJ_G0021544	Lsg1	81	81.818	Mus_spretus
ENSSTOG00000010234	LSG1	99	78.842	ENSMPUG00000003734	LSG1	81	77.046	Mustela_putorius_furo
ENSSTOG00000010234	LSG1	99	80.478	ENSMLUG00000012548	LSG1	81	78.788	Myotis_lucifugus
ENSSTOG00000010234	LSG1	99	80.000	ENSNGAG00000021872	Lsg1	80	79.798	Nannospalax_galili
ENSSTOG00000010234	LSG1	99	81.836	ENSNLEG00000008293	LSG1	82	79.249	Nomascus_leucogenys
ENSSTOG00000010234	LSG1	66	69.081	ENSMEUG00000009041	-	63	69.275	Notamacropus_eugenii
ENSSTOG00000010234	LSG1	92	59.091	ENSONIG00000002635	lsg1	75	58.333	Oreochromis_niloticus
ENSSTOG00000010234	LSG1	92	66.733	ENSOANG00000012742	LSG1	79	64.440	Ornithorhynchus_anatinus
ENSSTOG00000010234	LSG1	99	81.818	ENSOCUG00000004817	LSG1	81	81.818	Oryctolagus_cuniculus
ENSSTOG00000010234	LSG1	90	60.460	ENSORLG00000007695	lsg1	71	60.460	Oryzias_latipes
ENSSTOG00000010234	LSG1	90	60.124	ENSORLG00020016286	lsg1	72	59.623	Oryzias_latipes_hni
ENSSTOG00000010234	LSG1	90	61.088	ENSORLG00015012025	lsg1	71	60.042	Oryzias_latipes_hsok
ENSSTOG00000010234	LSG1	90	59.053	ENSOMEG00000022379	lsg1	72	58.351	Oryzias_melastigma
ENSSTOG00000010234	LSG1	99	81.909	ENSOGAG00000003475	LSG1	81	79.920	Otolemur_garnettii
ENSSTOG00000010234	LSG1	99	78.788	ENSOARG00000020403	LSG1	81	78.788	Ovis_aries
ENSSTOG00000010234	LSG1	100	82.062	ENSPPAG00000029271	LSG1	90	79.388	Pan_paniscus
ENSSTOG00000010234	LSG1	99	78.740	ENSPPRG00000010281	LSG1	81	76.772	Panthera_pardus
ENSSTOG00000010234	LSG1	99	80.040	ENSPTIG00000010789	LSG1	81	78.044	Panthera_tigris_altaica
ENSSTOG00000010234	LSG1	100	81.856	ENSPTRG00000015760	LSG1	90	79.184	Pan_troglodytes
ENSSTOG00000010234	LSG1	99	81.818	ENSPANG00000018249	LSG1	82	81.818	Papio_anubis
ENSSTOG00000010234	LSG1	90	60.700	ENSPKIG00000002895	lsg1	73	60.123	Paramormyrops_kingsleyae
ENSSTOG00000010234	LSG1	92	62.574	ENSPSIG00000009821	LSG1	78	59.802	Pelodiscus_sinensis
ENSSTOG00000010234	LSG1	90	60.123	ENSPMGG00000000931	lsg1	77	58.452	Periophthalmus_magnuspinnatus
ENSSTOG00000010234	LSG1	99	78.788	ENSPEMG00000012082	-	81	78.788	Peromyscus_maniculatus_bairdii
ENSSTOG00000010234	LSG1	92	55.299	ENSPMAG00000007451	lsg1	76	54.776	Petromyzon_marinus
ENSSTOG00000010234	LSG1	92	67.368	ENSPCIG00000013890	LSG1	61	67.368	Phascolarctos_cinereus
ENSSTOG00000010234	LSG1	92	59.725	ENSPFOG00000021882	lsg1	75	60.679	Poecilia_formosa
ENSSTOG00000010234	LSG1	92	60.636	ENSPLAG00000019536	lsg1	75	61.818	Poecilia_latipinna
ENSSTOG00000010234	LSG1	90	60.404	ENSPMEG00000017281	lsg1	73	61.396	Poecilia_mexicana
ENSSTOG00000010234	LSG1	92	48.317	ENSPREG00000006048	lsg1	74	47.348	Poecilia_reticulata
ENSSTOG00000010234	LSG1	90	81.336	ENSPPYG00000014425	LSG1	88	79.446	Pongo_abelii
ENSSTOG00000010234	LSG1	99	81.818	ENSPCAG00000005511	LSG1	81	81.818	Procavia_capensis
ENSSTOG00000010234	LSG1	99	84.274	ENSPCOG00000012360	LSG1	81	82.460	Propithecus_coquereli
ENSSTOG00000010234	LSG1	92	59.684	ENSPNYG00000021994	lsg1	75	57.339	Pundamilia_nyererei
ENSSTOG00000010234	LSG1	92	59.325	ENSPNAG00000015533	lsg1	76	59.036	Pygocentrus_nattereri
ENSSTOG00000010234	LSG1	99	84.848	ENSRNOG00000001727	Lsg1	81	84.848	Rattus_norvegicus
ENSSTOG00000010234	LSG1	100	82.680	ENSRBIG00000029053	LSG1	89	80.825	Rhinopithecus_bieti
ENSSTOG00000010234	LSG1	100	82.680	ENSRROG00000037702	LSG1	89	80.825	Rhinopithecus_roxellana
ENSSTOG00000010234	LSG1	100	83.505	ENSSBOG00000034938	LSG1	89	83.505	Saimiri_boliviensis_boliviensis
ENSSTOG00000010234	LSG1	92	63.477	ENSSHAG00000003487	LSG1	97	62.427	Sarcophilus_harrisii
ENSSTOG00000010234	LSG1	92	60.239	ENSSFOG00015008955	lsg1	75	59.960	Scleropages_formosus
ENSSTOG00000010234	LSG1	92	59.722	ENSSDUG00000004622	lsg1	75	58.600	Seriola_dumerili
ENSSTOG00000010234	LSG1	92	58.847	ENSSLDG00000010869	lsg1	75	58.116	Seriola_lalandi_dorsalis
ENSSTOG00000010234	LSG1	76	81.121	ENSSARG00000012981	LSG1	57	81.121	Sorex_araneus
ENSSTOG00000010234	LSG1	92	63.922	ENSSPUG00000016347	LSG1	76	62.402	Sphenodon_punctatus
ENSSTOG00000010234	LSG1	92	59.677	ENSSPAG00000005508	lsg1	78	58.964	Stegastes_partitus
ENSSTOG00000010234	LSG1	99	78.400	ENSSSCG00000011827	LSG1	80	76.400	Sus_scrofa
ENSSTOG00000010234	LSG1	92	63.529	ENSTGUG00000009068	LSG1	86	62.115	Taeniopygia_guttata
ENSSTOG00000010234	LSG1	92	55.960	ENSTRUG00000017380	lsg1	74	55.061	Takifugu_rubripes
ENSSTOG00000010234	LSG1	92	59.245	ENSTNIG00000015570	lsg1	75	58.416	Tetraodon_nigroviridis
ENSSTOG00000010234	LSG1	99	75.758	ENSTTRG00000000559	LSG1	81	75.758	Tursiops_truncatus
ENSSTOG00000010234	LSG1	99	78.643	ENSUAMG00000012454	LSG1	81	76.846	Ursus_americanus
ENSSTOG00000010234	LSG1	99	78.643	ENSUMAG00000000855	LSG1	81	76.846	Ursus_maritimus
ENSSTOG00000010234	LSG1	90	82.474	ENSVPAG00000012400	LSG1	78	80.785	Vicugna_pacos
ENSSTOG00000010234	LSG1	92	80.000	ENSVVUG00000008956	LSG1	77	77.778	Vulpes_vulpes
ENSSTOG00000010234	LSG1	92	60.158	ENSXETG00000003451	lsg1	76	59.961	Xenopus_tropicalis
ENSSTOG00000010234	LSG1	92	60.765	ENSXCOG00000003239	lsg1	75	60.041	Xiphophorus_couchianus
ENSSTOG00000010234	LSG1	92	58.812	ENSXMAG00000005536	lsg1	76	57.834	Xiphophorus_maculatus