EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSSTOG00000010416 (Gene tree)
Gene ID
101963858
Gene Symbol
PABPC4
Alias
APP-1|iPABP
Full Name
poly(A) binding protein cytoplasmic 4
Gene Type
protein_coding
Species
Ictidomys_tridecemlineatus
Status
putative
Strand
Minus strand
Length
16061 bases
Position
chrJH393284.1:21452005-21468065
Accession
101963858
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSTOP00000030587PABPPF00658.181.5e-3111
ENSSTOP00000009349PABPPF00658.181.5e-3111
ENSSTOP00000029477PABPPF00658.181.6e-3111
ENSSTOP00000030587RRM_5PF13893.62.4e-0912
ENSSTOP00000030587RRM_5PF13893.62.4e-0922
ENSSTOP00000029477RRM_5PF13893.63e-0912
ENSSTOP00000029477RRM_5PF13893.63e-0922
ENSSTOP00000009349RRM_5PF13893.63.3e-0611
ENSSTOP00000030587RRM_1PF00076.223.1e-9214
ENSSTOP00000030587RRM_1PF00076.223.1e-9224
ENSSTOP00000030587RRM_1PF00076.223.1e-9234
ENSSTOP00000030587RRM_1PF00076.223.1e-9244
ENSSTOP00000029477RRM_1PF00076.224e-9214
ENSSTOP00000029477RRM_1PF00076.224e-9224
ENSSTOP00000029477RRM_1PF00076.224e-9234
ENSSTOP00000029477RRM_1PF00076.224e-9244
ENSSTOP00000009349RRM_1PF00076.221.2e-8514
ENSSTOP00000009349RRM_1PF00076.221.2e-8524
ENSSTOP00000009349RRM_1PF00076.221.2e-8534
ENSSTOP00000009349RRM_1PF00076.221.2e-8544
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSTOT00000010418PABPC4-2031788-ENSSTOP00000009349595 (aa)-I3MFF8
ENSSTOT00000032742PABPC4-2023603XM_005317856ENSSTOP00000030587615 (aa)XP_005317913A0A287DAI8
ENSSTOT00000032302PABPC4-2013690XM_005317853ENSSTOP00000029477644 (aa)XP_005317910A0A287D7C4
Gene Model
Click here to download ENSSTOG00000010416's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSSTOG00000010416's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSSTOG00000010416PABPC49578.418ENSSTOG00000016395PABPC310078.254
ENSSTOG00000010416PABPC46130.625ENSSTOG00000027271ELAVL49033.735
ENSSTOG00000010416PABPC45937.500ENSSTOG00000001564CELF26037.500
ENSSTOG00000010416PABPC49866.558ENSSTOG00000003739PABPC1L9966.234
ENSSTOG00000010416PABPC45933.553ENSSTOG00000009130ELAVL19533.553
ENSSTOG00000010416PABPC46076.142ENSSTOG00000022096-10076.142
ENSSTOG00000010416PABPC46040.278ENSSTOG00000010354RBM236640.278
ENSSTOG00000010416PABPC46076.142ENSSTOG00000026028-10076.142
ENSSTOG00000010416PABPC45531.013ENSSTOG00000028543-5430.968
ENSSTOG00000010416PABPC45732.530ENSSTOG00000025095TIAL17830.682
ENSSTOG00000010416PABPC46034.940ENSSTOG00000007792ELAVL28634.940
ENSSTOG00000010416PABPC46535.196ENSSTOG00000029627-5036.111
ENSSTOG00000010416PABPC45239.535ENSSTOG00000000613CELF17038.636
ENSSTOG00000010416PABPC46173.901ENSSTOG00000019472PABPC4L9873.497
ENSSTOG00000010416PABPC46032.099ENSSTOG00000021111ELAVL39233.735
ENSSTOG00000010416PABPC45930.370ENSSTOG00000008309TIA18530.189
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSTOG00000010416PABPC410099.379ENSG00000090621PABPC4100100.000Homo_sapiens
ENSSTOG00000010416PABPC49984.628ENSAPOG00000001161pabpc410084.848Acanthochromis_polyacanthus
ENSSTOG00000010416PABPC410096.667ENSAMEG00000011535-10096.667Ailuropoda_melanoleuca
ENSSTOG00000010416PABPC49857.283ENSAMEG00000015083-9956.956Ailuropoda_melanoleuca
ENSSTOG00000010416PABPC410084.177ENSACIG00000023343pabpc410084.810Amphilophus_citrinellus
ENSSTOG00000010416PABPC49984.790ENSAOCG00000021529pabpc410085.008Amphiprion_ocellaris
ENSSTOG00000010416PABPC49984.790ENSAPEG00000019196pabpc410085.008Amphiprion_percula
ENSSTOG00000010416PABPC49984.330ENSATEG00000007402pabpc410084.554Anabas_testudineus
ENSSTOG00000010416PABPC49988.491ENSAPLG00000009729-10089.365Anas_platyrhynchos
ENSSTOG00000010416PABPC49988.193ENSACAG00000002544PABPC410088.193Anolis_carolinensis
ENSSTOG00000010416PABPC410096.818ENSANAG00000025079PABPC410096.818Aotus_nancymaae
ENSSTOG00000010416PABPC410084.236ENSACLG00000019558pabpc410084.873Astatotilapia_calliptera
ENSSTOG00000010416PABPC49980.624ENSAMXG00000018779pabpc49981.281Astyanax_mexicanus
ENSSTOG00000010416PABPC45986.826ENSBTAG00000048536-9886.826Bos_taurus
ENSSTOG00000010416PABPC410098.915ENSBTAG00000017125PABPC410098.915Bos_taurus
ENSSTOG00000010416PABPC47888.327ENSCJAG00000045953-9288.382Callithrix_jacchus
ENSSTOG00000010416PABPC410096.667ENSCJAG00000002512-10096.667Callithrix_jacchus
ENSSTOG00000010416PABPC410096.830ENSCAFG00000003081PABPC410096.830Canis_familiaris
ENSSTOG00000010416PABPC410096.818ENSCAFG00020004161PABPC410096.818Canis_lupus_dingo
ENSSTOG00000010416PABPC410078.416ENSCHIG00000023385-10078.416Capra_hircus
ENSSTOG00000010416PABPC410096.667ENSCHIG00000019398-10096.667Capra_hircus
ENSSTOG00000010416PABPC410096.970ENSTSYG00000006532PABPC410096.970Carlito_syrichta
ENSSTOG00000010416PABPC49996.960ENSCAPG00000015984PABPC410096.960Cavia_aperea
ENSSTOG00000010416PABPC410096.970ENSCPOG00000009552PABPC410096.970Cavia_porcellus
ENSSTOG00000010416PABPC410096.818ENSCCAG00000037306PABPC410096.818Cebus_capucinus
ENSSTOG00000010416PABPC410097.121ENSCATG00000042164PABPC410097.121Cercocebus_atys
ENSSTOG00000010416PABPC410096.970ENSCLAG00000011899PABPC410096.970Chinchilla_lanigera
ENSSTOG00000010416PABPC410097.121ENSCSAG00000001135PABPC410097.121Chlorocebus_sabaeus
ENSSTOG00000010416PABPC48997.625ENSCHOG00000005327PABPC48197.625Choloepus_hoffmanni
ENSSTOG00000010416PABPC49989.841ENSCPBG00000001038PABPC410089.841Chrysemys_picta_bellii
ENSSTOG00000010416PABPC49996.928ENSCANG00000034177PABPC410096.928Colobus_angolensis_palliatus
ENSSTOG00000010416PABPC410097.254ENSCGRG00001018166Pabpc410097.254Cricetulus_griseus_chok1gshd
ENSSTOG00000010416PABPC49997.340ENSCGRG00000009777Pabpc410097.340Cricetulus_griseus_crigri
ENSSTOG00000010416PABPC410083.784ENSCSEG00000000130pabpc410084.420Cynoglossus_semilaevis
ENSSTOG00000010416PABPC49984.765ENSCVAG00000019246pabpc410085.413Cyprinodon_variegatus
ENSSTOG00000010416PABPC49984.236ENSDARG00000059259pabpc410084.653Danio_rerio
ENSSTOG00000010416PABPC49996.786ENSDNOG00000018444-10096.786Dasypus_novemcinctus
ENSSTOG00000010416PABPC410099.534ENSDORG00000011581Pabpc410099.534Dipodomys_ordii
ENSSTOG00000010416PABPC4100100.000ENSETEG00000018453-84100.000Echinops_telfairi
ENSSTOG00000010416PABPC48662.568ENSETEG00000009172-9963.370Echinops_telfairi
ENSSTOG00000010416PABPC49776.585ENSEBUG00000013782pabpc49976.077Eptatretus_burgeri
ENSSTOG00000010416PABPC49976.677ENSEBUG00000000992pabpc410076.358Eptatretus_burgeri
ENSSTOG00000010416PABPC410097.273ENSEASG00005014119PABPC410097.273Equus_asinus_asinus
ENSSTOG00000010416PABPC410097.273ENSECAG00000009396PABPC410097.273Equus_caballus
ENSSTOG00000010416PABPC410093.939ENSEEUG00000002962PABPC410093.939Erinaceus_europaeus
ENSSTOG00000010416PABPC49982.748ENSELUG00000003195pabpc49983.201Esox_lucius
ENSSTOG00000010416PABPC410096.970ENSFCAG00000015254-10096.970Felis_catus
ENSSTOG00000010416PABPC49987.758ENSFALG00000000543PABPC410089.030Ficedula_albicollis
ENSSTOG00000010416PABPC410097.273ENSFDAG00000020016-10097.273Fukomys_damarensis
ENSSTOG00000010416PABPC49067.660ENSFDAG00000010581-10063.040Fukomys_damarensis
ENSSTOG00000010416PABPC410084.530ENSFHEG00000007548pabpc410085.167Fundulus_heteroclitus
ENSSTOG00000010416PABPC49982.409ENSGMOG00000019025pabpc49983.175Gadus_morhua
ENSSTOG00000010416PABPC49988.889ENSGALG00000003800PABPC410089.683Gallus_gallus
ENSSTOG00000010416PABPC49990.566ENSGAFG00000018195pabpc49895.556Gambusia_affinis
ENSSTOG00000010416PABPC410082.803ENSGACG00000007179pabpc410083.439Gasterosteus_aculeatus
ENSSTOG00000010416PABPC49989.524ENSGAGG00000001888PABPC410089.524Gopherus_agassizii
ENSSTOG00000010416PABPC410096.970ENSGGOG00000004002PABPC410096.970Gorilla_gorilla
ENSSTOG00000010416PABPC410084.395ENSHBUG00000020206pabpc410085.032Haplochromis_burtoni
ENSSTOG00000010416PABPC410099.845ENSHGLG00000011162PABPC410099.845Heterocephalus_glaber_female
ENSSTOG00000010416PABPC410099.845ENSHGLG00100001580PABPC410099.845Heterocephalus_glaber_male
ENSSTOG00000010416PABPC410083.413ENSHCOG00000012694pabpc410084.051Hippocampus_comes
ENSSTOG00000010416PABPC49882.448ENSIPUG00000016620pabpc49982.492Ictalurus_punctatus
ENSSTOG00000010416PABPC410097.205ENSJJAG00000007781Pabpc410097.205Jaculus_jaculus
ENSSTOG00000010416PABPC49984.270ENSKMAG00000013597pabpc49984.912Kryptolebias_marmoratus
ENSSTOG00000010416PABPC410083.651ENSLBEG00000013654pabpc410083.492Labrus_bergylta
ENSSTOG00000010416PABPC49986.120ENSLACG00000011907PABPC410087.066Latimeria_chalumnae
ENSSTOG00000010416PABPC49984.992ENSLOCG00000001877pabpc49985.782Lepisosteus_oculatus
ENSSTOG00000010416PABPC410099.187ENSLAFG00000000151PABPC410099.187Loxodonta_africana
ENSSTOG00000010416PABPC410097.121ENSMFAG00000041481PABPC410097.121Macaca_fascicularis
ENSSTOG00000010416PABPC410097.121ENSMMUG00000007497PABPC410097.121Macaca_mulatta
ENSSTOG00000010416PABPC410096.970ENSMNEG00000043054PABPC410096.970Macaca_nemestrina
ENSSTOG00000010416PABPC410097.121ENSMLEG00000040716PABPC410097.121Mandrillus_leucophaeus
ENSSTOG00000010416PABPC49984.330ENSMAMG00000010025pabpc49984.615Mastacembelus_armatus
ENSSTOG00000010416PABPC410084.076ENSMZEG00005006141pabpc410084.713Maylandia_zebra
ENSSTOG00000010416PABPC49986.905ENSMGAG00000005408PABPC410086.905Meleagris_gallopavo
ENSSTOG00000010416PABPC47489.423ENSMAUG00000001295-9789.423Mesocricetus_auratus
ENSSTOG00000010416PABPC478100.000ENSMAUG00000019763-8495.413Mesocricetus_auratus
ENSSTOG00000010416PABPC45981.287ENSMAUG00000004089-9281.287Mesocricetus_auratus
ENSSTOG00000010416PABPC49986.106ENSMICG00000036729-10085.923Microcebus_murinus
ENSSTOG00000010416PABPC48899.267ENSMICG00000016633-10099.267Microcebus_murinus
ENSSTOG00000010416PABPC410095.482ENSMOCG00000006763Pabpc410095.482Microtus_ochrogaster
ENSSTOG00000010416PABPC410082.504ENSMMOG00000002363pabpc49981.359Mola_mola
ENSSTOG00000010416PABPC46682.692ENSMODG00000019847-6882.692Monodelphis_domestica
ENSSTOG00000010416PABPC49887.752ENSMODG00000017657-10087.367Monodelphis_domestica
ENSSTOG00000010416PABPC46074.294ENSMODG00000018051-9174.294Monodelphis_domestica
ENSSTOG00000010416PABPC49983.897ENSMALG00000011017pabpc410084.127Monopterus_albus
ENSSTOG00000010416PABPC49984.456MGP_CAROLIEiJ_G0024864-10084.870Mus_caroli
ENSSTOG00000010416PABPC410095.303MGP_CAROLIEiJ_G0026435-10099.291Mus_caroli
ENSSTOG00000010416PABPC410098.137ENSMUSG00000011257Pabpc410099.405Mus_musculus
ENSSTOG00000010416PABPC49995.392MGP_PahariEiJ_G0028765Pabpc4100100.000Mus_pahari
ENSSTOG00000010416PABPC49976.523MGP_SPRETEiJ_G0027415Pabpc410099.291Mus_spretus
ENSSTOG00000010416PABPC49551.821ENSMPUG00000006836-10051.256Mustela_putorius_furo
ENSSTOG00000010416PABPC410096.970ENSMPUG00000014414-10096.970Mustela_putorius_furo
ENSSTOG00000010416PABPC410099.024ENSMLUG00000012068PABPC410099.024Myotis_lucifugus
ENSSTOG00000010416PABPC410098.913ENSNGAG00000018292Pabpc410098.913Nannospalax_galili
ENSSTOG00000010416PABPC46986.441ENSNBRG00000010047-7586.441Neolamprologus_brichardi
ENSSTOG00000010416PABPC46192.788ENSNBRG00000009708pabpc49892.788Neolamprologus_brichardi
ENSSTOG00000010416PABPC410099.534ENSNLEG00000011928PABPC410099.534Nomascus_leucogenys
ENSSTOG00000010416PABPC48798.934ENSOPRG00000011984PABPC48698.934Ochotona_princeps
ENSSTOG00000010416PABPC45485.714ENSODEG00000013457-10085.714Octodon_degus
ENSSTOG00000010416PABPC410096.364ENSODEG00000006592-10096.364Octodon_degus
ENSSTOG00000010416PABPC49986.448ENSODEG00000017434-10086.354Octodon_degus
ENSSTOG00000010416PABPC410084.395ENSONIG00000008176pabpc410085.032Oreochromis_niloticus
ENSSTOG00000010416PABPC49989.365ENSOANG00000010001PABPC410089.365Ornithorhynchus_anatinus
ENSSTOG00000010416PABPC49696.677ENSOCUG00000000562PABPC48896.677Oryctolagus_cuniculus
ENSSTOG00000010416PABPC49991.049ENSORLG00000017479pabpc49991.049Oryzias_latipes
ENSSTOG00000010416PABPC49991.049ENSORLG00020018644pabpc49991.049Oryzias_latipes_hni
ENSSTOG00000010416PABPC49991.049ENSORLG00015015042pabpc49991.049Oryzias_latipes_hsok
ENSSTOG00000010416PABPC49984.653ENSOMEG00000014410pabpc49985.096Oryzias_melastigma
ENSSTOG00000010416PABPC410099.227ENSOGAG00000004067PABPC410099.227Otolemur_garnettii
ENSSTOG00000010416PABPC410096.667ENSOARG00000020060PABPC410096.667Ovis_aries
ENSSTOG00000010416PABPC410096.970ENSPPAG00000043625PABPC410096.970Pan_paniscus
ENSSTOG00000010416PABPC410096.970ENSPPRG00000024727PABPC410096.970Panthera_pardus
ENSSTOG00000010416PABPC410096.970ENSPTIG00000005829PABPC410096.970Panthera_tigris_altaica
ENSSTOG00000010416PABPC410096.970ENSPTRG00000000573PABPC410096.970Pan_troglodytes
ENSSTOG00000010416PABPC410096.970ENSPANG00000009484PABPC410096.970Papio_anubis
ENSSTOG00000010416PABPC49983.968ENSPKIG00000025356pabpc49984.469Paramormyrops_kingsleyae
ENSSTOG00000010416PABPC49989.683ENSPSIG00000016892PABPC410089.683Pelodiscus_sinensis
ENSSTOG00000010416PABPC410083.522ENSPMGG00000009073pabpc49982.581Periophthalmus_magnuspinnatus
ENSSTOG00000010416PABPC410095.152ENSPEMG00000023569-9995.152Peromyscus_maniculatus_bairdii
ENSSTOG00000010416PABPC410093.634ENSPEMG00000024193-9993.634Peromyscus_maniculatus_bairdii
ENSSTOG00000010416PABPC49773.109ENSPMAG00000007885pabpc410072.709Petromyzon_marinus
ENSSTOG00000010416PABPC48873.124ENSPMAG00000002836pabpc410073.776Petromyzon_marinus
ENSSTOG00000010416PABPC49894.033ENSPCIG00000020674PABPC410093.810Phascolarctos_cinereus
ENSSTOG00000010416PABPC410083.892ENSPFOG00000002682pabpc410085.008Poecilia_formosa
ENSSTOG00000010416PABPC410083.732ENSPLAG00000010112pabpc410084.848Poecilia_latipinna
ENSSTOG00000010416PABPC49984.441ENSPMEG00000019739pabpc410085.167Poecilia_mexicana
ENSSTOG00000010416PABPC410084.211ENSPREG00000001589pabpc410084.848Poecilia_reticulata
ENSSTOG00000010416PABPC410096.970ENSPPYG00000001506PABPC410096.970Pongo_abelii
ENSSTOG00000010416PABPC410091.970ENSPCAG00000003341PABPC410091.970Procavia_capensis
ENSSTOG00000010416PABPC410097.126ENSPCOG00000023725-10097.126Propithecus_coquereli
ENSSTOG00000010416PABPC49979.796ENSPCOG00000025882-9594.059Propithecus_coquereli
ENSSTOG00000010416PABPC49996.134ENSPVAG00000002187PABPC410096.134Pteropus_vampyrus
ENSSTOG00000010416PABPC410084.236ENSPNYG00000006134pabpc410084.873Pundamilia_nyererei
ENSSTOG00000010416PABPC410083.544ENSPNAG00000024355pabpc410084.177Pygocentrus_nattereri
ENSSTOG00000010416PABPC410098.137ENSRNOG00000015642Pabpc410098.137Rattus_norvegicus
ENSSTOG00000010416PABPC410095.963ENSRNOG00000028592AABR07035074.110095.963Rattus_norvegicus
ENSSTOG00000010416PABPC410097.121ENSRBIG00000039761PABPC410097.121Rhinopithecus_bieti
ENSSTOG00000010416PABPC410097.121ENSRROG00000033355PABPC410097.121Rhinopithecus_roxellana
ENSSTOG00000010416PABPC410096.667ENSSBOG00000026193PABPC410096.667Saimiri_boliviensis_boliviensis
ENSSTOG00000010416PABPC49890.615ENSSHAG00000018139PABPC410090.159Sarcophilus_harrisii
ENSSTOG00000010416PABPC49985.173ENSSFOG00015023514pabpc49985.173Scleropages_formosus
ENSSTOG00000010416PABPC49983.871ENSSMAG00000009007pabpc49984.516Scophthalmus_maximus
ENSSTOG00000010416PABPC49988.046ENSSDUG00000012683pabpc410084.236Seriola_dumerili
ENSSTOG00000010416PABPC49984.006ENSSLDG00000013025pabpc410084.236Seriola_lalandi_dorsalis
ENSSTOG00000010416PABPC410089.545ENSSARG00000000310PABPC410089.545Sorex_araneus
ENSSTOG00000010416PABPC49990.224ENSSPUG00000003204PABPC410090.224Sphenodon_punctatus
ENSSTOG00000010416PABPC49990.562ENSSPAG00000009252pabpc49790.359Stegastes_partitus
ENSSTOG00000010416PABPC48951.557ENSSSCG00000036170-9651.557Sus_scrofa
ENSSTOG00000010416PABPC410096.818ENSSSCG00000003660-10096.818Sus_scrofa
ENSSTOG00000010416PABPC49985.758ENSTGUG00000001266PABPC410085.758Taeniopygia_guttata
ENSSTOG00000010416PABPC410083.333ENSTRUG00000005907pabpc49983.974Takifugu_rubripes
ENSSTOG00000010416PABPC410079.355ENSTNIG00000016902pabpc49977.586Tetraodon_nigroviridis
ENSSTOG00000010416PABPC49985.714ENSTBEG00000009035PABPC410085.714Tupaia_belangeri
ENSSTOG00000010416PABPC49980.651ENSTTRG00000014340PABPC410084.538Tursiops_truncatus
ENSSTOG00000010416PABPC410096.672ENSUAMG00000000303PABPC410096.672Ursus_americanus
ENSSTOG00000010416PABPC410097.523ENSUMAG00000019585PABPC410099.057Ursus_maritimus
ENSSTOG00000010416PABPC48396.429ENSVPAG00000010041PABPC47796.429Vicugna_pacos
ENSSTOG00000010416PABPC410096.830ENSVVUG00000005215PABPC410096.830Vulpes_vulpes
ENSSTOG00000010416PABPC46497.024ENSXETG00000027221-10097.024Xenopus_tropicalis
ENSSTOG00000010416PABPC49981.558ENSXETG00000010946pabpc410082.035Xenopus_tropicalis
ENSSTOG00000010416PABPC49989.351ENSXCOG00000013190pabpc49690.094Xiphophorus_couchianus
ENSSTOG00000010416PABPC410084.051ENSXMAG00000019007pabpc410084.689Xiphophorus_maculatus

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