EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSTOG00000010683 (Gene tree)
Gene ID: 101954354
Gene Symbol: SMARCA5
Alias: ISWI|hISWI|hSNF2H
Full Name: SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 5
Gene Type: protein_coding
Species: Ictidomys_tridecemlineatus
Status: putative
Strand: Minus strand
Length: 33554 bases
Position: chrJH393345.1:4856672-4890225
Accession: 101954354
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSTOP00000009598	ResIII	PF04851.15	6.8e-11	1	1
ENSSTOP00000026905	ResIII	PF04851.15	6.9e-11	1	1
ENSSTOP00000009598	DEAD	PF00270.29	3.8e-06	1	1
ENSSTOP00000026905	DEAD	PF00270.29	3.8e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSTOT00000010692	SMARCA5-201	5950	XM_005327556	ENSSTOP00000009598	1054 (aa)	XP_005327613	I3MFZ2
ENSSTOT00000039142	SMARCA5-202	6095	-	ENSSTOP00000026905	1058 (aa)	-	A0A287CZY7

Gene Model

Click here to download ENSSTOG00000010683's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSTOG00000010683's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSTOG00000010683	SMARCA5	57	39.905	ENSSTOG00000022273	CHD9	58	43.393
ENSSTOG00000010683	SMARCA5	93	85.729	ENSSTOG00000014524	SMARCA1	94	85.876
ENSSTOG00000010683	SMARCA5	53	39.085	ENSSTOG00000007032	CHD1L	59	39.085

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSTOG00000010683	SMARCA5	99	98.575	ENSG00000153147	SMARCA5	100	98.575	Homo_sapiens
ENSSTOG00000010683	SMARCA5	99	98.860	ENSAMEG00000009585	SMARCA5	100	98.860	Ailuropoda_melanoleuca
ENSSTOG00000010683	SMARCA5	91	97.020	ENSAPLG00000009206	SMARCA5	100	96.920	Anas_platyrhynchos
ENSSTOG00000010683	SMARCA5	97	94.374	ENSACAG00000003038	SMARCA5	99	94.374	Anolis_carolinensis
ENSSTOG00000010683	SMARCA5	99	98.481	ENSANAG00000019345	SMARCA5	100	98.481	Aotus_nancymaae
ENSSTOG00000010683	SMARCA5	99	98.386	ENSBTAG00000003399	SMARCA5	100	98.386	Bos_taurus
ENSSTOG00000010683	SMARCA5	99	98.670	ENSCJAG00000002735	SMARCA5	100	98.670	Callithrix_jacchus
ENSSTOG00000010683	SMARCA5	99	98.765	ENSCAFG00000007525	SMARCA5	100	98.765	Canis_familiaris
ENSSTOG00000010683	SMARCA5	98	98.742	ENSCAFG00020025641	SMARCA5	99	98.742	Canis_lupus_dingo
ENSSTOG00000010683	SMARCA5	99	97.151	ENSCHIG00000016375	-	100	97.151	Capra_hircus
ENSSTOG00000010683	SMARCA5	99	98.765	ENSCHIG00000013730	-	100	98.765	Capra_hircus
ENSSTOG00000010683	SMARCA5	96	98.510	ENSTSYG00000009954	SMARCA5	99	99.496	Carlito_syrichta
ENSSTOG00000010683	SMARCA5	92	99.277	ENSCAPG00000013747	SMARCA5	95	99.277	Cavia_aperea
ENSSTOG00000010683	SMARCA5	99	98.291	ENSCPOG00000002259	SMARCA5	100	98.291	Cavia_porcellus
ENSSTOG00000010683	SMARCA5	99	98.670	ENSCCAG00000027215	SMARCA5	100	98.670	Cebus_capucinus
ENSSTOG00000010683	SMARCA5	99	98.670	ENSCATG00000044917	SMARCA5	100	98.670	Cercocebus_atys
ENSSTOG00000010683	SMARCA5	96	98.121	ENSCLAG00000006153	SMARCA5	100	99.597	Chinchilla_lanigera
ENSSTOG00000010683	SMARCA5	92	99.484	ENSCSAG00000003448	SMARCA5	100	99.484	Chlorocebus_sabaeus
ENSSTOG00000010683	SMARCA5	89	98.405	ENSCHOG00000011724	SMARCA5	86	98.405	Choloepus_hoffmanni
ENSSTOG00000010683	SMARCA5	98	95.091	ENSCPBG00000027535	SMARCA5	96	98.298	Chrysemys_picta_bellii
ENSSTOG00000010683	SMARCA5	99	98.481	ENSCANG00000041629	SMARCA5	100	98.481	Colobus_angolensis_palliatus
ENSSTOG00000010683	SMARCA5	99	98.481	ENSCGRG00001012719	Smarca5	99	98.481	Cricetulus_griseus_chok1gshd
ENSSTOG00000010683	SMARCA5	95	99.103	ENSCGRG00000001417	Smarca5	99	99.698	Cricetulus_griseus_crigri
ENSSTOG00000010683	SMARCA5	98	95.459	ENSDNOG00000009158	SMARCA5	97	96.078	Dasypus_novemcinctus
ENSSTOG00000010683	SMARCA5	91	90.814	ENSDORG00000003466	Smarca5	98	90.814	Dipodomys_ordii
ENSSTOG00000010683	SMARCA5	92	85.640	ENSEBUG00000014773	SMARCA5	96	85.640	Eptatretus_burgeri
ENSSTOG00000010683	SMARCA5	99	98.955	ENSEASG00005001866	SMARCA5	100	98.955	Equus_asinus_asinus
ENSSTOG00000010683	SMARCA5	99	98.955	ENSECAG00000002676	SMARCA5	100	98.955	Equus_caballus
ENSSTOG00000010683	SMARCA5	94	95.166	ENSEEUG00000013176	SMARCA5	100	95.166	Erinaceus_europaeus
ENSSTOG00000010683	SMARCA5	92	89.072	ENSELUG00000014653	SMARCA5	99	89.072	Esox_lucius
ENSSTOG00000010683	SMARCA5	99	98.860	ENSFCAG00000004544	SMARCA5	100	98.860	Felis_catus
ENSSTOG00000010683	SMARCA5	92	97.526	ENSFALG00000004987	SMARCA5	100	97.526	Ficedula_albicollis
ENSSTOG00000010683	SMARCA5	99	95.977	ENSFDAG00000021016	SMARCA5	100	99.799	Fukomys_damarensis
ENSSTOG00000010683	SMARCA5	99	84.476	ENSGMOG00000007519	SMARCA5	94	89.355	Gadus_morhua
ENSSTOG00000010683	SMARCA5	94	97.791	ENSGALG00000009913	SMARCA5	96	97.698	Gallus_gallus
ENSSTOG00000010683	SMARCA5	96	87.968	ENSGACG00000017238	SMARCA5	95	90.481	Gasterosteus_aculeatus
ENSSTOG00000010683	SMARCA5	96	97.340	ENSGAGG00000019882	SMARCA5	96	98.398	Gopherus_agassizii
ENSSTOG00000010683	SMARCA5	99	98.575	ENSGGOG00000012595	SMARCA5	100	98.575	Gorilla_gorilla
ENSSTOG00000010683	SMARCA5	100	98.102	ENSHGLG00000000816	-	100	98.102	Heterocephalus_glaber_female
ENSSTOG00000010683	SMARCA5	95	89.950	ENSHGLG00000000317	-	95	89.880	Heterocephalus_glaber_female
ENSSTOG00000010683	SMARCA5	96	98.121	ENSHGLG00100018421	-	100	99.698	Heterocephalus_glaber_male
ENSSTOG00000010683	SMARCA5	99	98.291	ENSJJAG00000014965	Smarca5	100	98.291	Jaculus_jaculus
ENSSTOG00000010683	SMARCA5	94	95.459	ENSLACG00000007091	SMARCA5	97	95.459	Latimeria_chalumnae
ENSSTOG00000010683	SMARCA5	93	92.284	ENSLOCG00000008966	SMARCA5	98	90.765	Lepisosteus_oculatus
ENSSTOG00000010683	SMARCA5	99	98.481	ENSLAFG00000007795	SMARCA5	100	98.481	Loxodonta_africana
ENSSTOG00000010683	SMARCA5	99	98.670	ENSMFAG00000043649	SMARCA5	100	98.670	Macaca_fascicularis
ENSSTOG00000010683	SMARCA5	99	98.670	ENSMMUG00000000829	SMARCA5	100	98.670	Macaca_mulatta
ENSSTOG00000010683	SMARCA5	99	98.670	ENSMNEG00000031916	SMARCA5	100	98.670	Macaca_nemestrina
ENSSTOG00000010683	SMARCA5	99	98.670	ENSMLEG00000042393	SMARCA5	100	98.670	Mandrillus_leucophaeus
ENSSTOG00000010683	SMARCA5	95	97.400	ENSMGAG00000003517	SMARCA5	99	97.400	Meleagris_gallopavo
ENSSTOG00000010683	SMARCA5	94	99.799	ENSMAUG00000015902	Smarca5	98	99.799	Mesocricetus_auratus
ENSSTOG00000010683	SMARCA5	99	98.765	ENSMICG00000003971	SMARCA5	100	98.765	Microcebus_murinus
ENSSTOG00000010683	SMARCA5	99	98.101	ENSMOCG00000016986	-	99	98.101	Microtus_ochrogaster
ENSSTOG00000010683	SMARCA5	99	96.117	ENSMODG00000000391	SMARCA5	95	99.299	Monodelphis_domestica
ENSSTOG00000010683	SMARCA5	99	98.386	ENSMUSG00000031715	Smarca5	100	98.386	Mus_musculus
ENSSTOG00000010683	SMARCA5	99	98.575	MGP_PahariEiJ_G0022862	Smarca5	100	98.575	Mus_pahari
ENSSTOG00000010683	SMARCA5	99	99.240	ENSMLUG00000000468	SMARCA5	100	99.240	Myotis_lucifugus
ENSSTOG00000010683	SMARCA5	99	98.291	ENSNGAG00000000441	Smarca5	100	98.291	Nannospalax_galili
ENSSTOG00000010683	SMARCA5	99	98.670	ENSNLEG00000005383	SMARCA5	100	98.670	Nomascus_leucogenys
ENSSTOG00000010683	SMARCA5	92	91.529	ENSMEUG00000001267	SMARCA5	100	91.529	Notamacropus_eugenii
ENSSTOG00000010683	SMARCA5	85	98.429	ENSOPRG00000014427	SMARCA5	86	98.429	Ochotona_princeps
ENSSTOG00000010683	SMARCA5	92	99.278	ENSOANG00000013921	SMARCA5	100	99.278	Ornithorhynchus_anatinus
ENSSTOG00000010683	SMARCA5	92	99.897	ENSOCUG00000013042	SMARCA5	100	99.897	Oryctolagus_cuniculus
ENSSTOG00000010683	SMARCA5	99	98.670	ENSOGAG00000009702	SMARCA5	100	98.670	Otolemur_garnettii
ENSSTOG00000010683	SMARCA5	99	98.479	ENSOARG00000010589	SMARCA5	99	98.479	Ovis_aries
ENSSTOG00000010683	SMARCA5	99	98.386	ENSPPAG00000028523	SMARCA5	100	98.386	Pan_paniscus
ENSSTOG00000010683	SMARCA5	97	93.457	ENSPPRG00000004925	SMARCA5	97	94.412	Panthera_pardus
ENSSTOG00000010683	SMARCA5	96	99.406	ENSPTIG00000020959	SMARCA5	97	99.406	Panthera_tigris_altaica
ENSSTOG00000010683	SMARCA5	99	98.481	ENSPTRG00000016472	SMARCA5	100	98.481	Pan_troglodytes
ENSSTOG00000010683	SMARCA5	99	98.670	ENSPANG00000001175	SMARCA5	100	98.670	Papio_anubis
ENSSTOG00000010683	SMARCA5	93	91.104	ENSPKIG00000015885	SMARCA5	100	91.340	Paramormyrops_kingsleyae
ENSSTOG00000010683	SMARCA5	93	90.779	ENSPKIG00000015699	SMARCA5	98	89.716	Paramormyrops_kingsleyae
ENSSTOG00000010683	SMARCA5	94	96.289	ENSPSIG00000004177	SMARCA5	100	96.289	Pelodiscus_sinensis
ENSSTOG00000010683	SMARCA5	92	90.021	ENSPMGG00000012316	SMARCA5	100	90.021	Periophthalmus_magnuspinnatus
ENSSTOG00000010683	SMARCA5	96	97.931	ENSPEMG00000008060	Smarca5	99	97.931	Peromyscus_maniculatus_bairdii
ENSSTOG00000010683	SMARCA5	61	86.895	ENSPMAG00000008026	SMARCA5	99	86.895	Petromyzon_marinus
ENSSTOG00000010683	SMARCA5	96	69.578	ENSPMAG00000006011	SMARCA5	81	85.600	Petromyzon_marinus
ENSSTOG00000010683	SMARCA5	99	96.219	ENSPCIG00000003926	SMARCA5	100	96.219	Phascolarctos_cinereus
ENSSTOG00000010683	SMARCA5	99	98.765	ENSPPYG00000015091	SMARCA5	100	98.765	Pongo_abelii
ENSSTOG00000010683	SMARCA5	85	89.759	ENSPCAG00000014230	SMARCA5	88	90.644	Procavia_capensis
ENSSTOG00000010683	SMARCA5	99	96.011	ENSPCOG00000026744	SMARCA5	100	96.011	Propithecus_coquereli
ENSSTOG00000010683	SMARCA5	99	98.764	ENSPVAG00000006482	SMARCA5	100	98.764	Pteropus_vampyrus
ENSSTOG00000010683	SMARCA5	97	88.333	ENSPNAG00000027824	SMARCA5	98	89.652	Pygocentrus_nattereri
ENSSTOG00000010683	SMARCA5	94	99.598	ENSRNOG00000018149	Smarca5	100	99.598	Rattus_norvegicus
ENSSTOG00000010683	SMARCA5	99	98.482	ENSRBIG00000044644	SMARCA5	100	98.482	Rhinopithecus_bieti
ENSSTOG00000010683	SMARCA5	98	98.356	ENSRROG00000029591	SMARCA5	99	99.396	Rhinopithecus_roxellana
ENSSTOG00000010683	SMARCA5	99	98.670	ENSSBOG00000036257	SMARCA5	100	98.670	Saimiri_boliviensis_boliviensis
ENSSTOG00000010683	SMARCA5	94	99.295	ENSSHAG00000008464	SMARCA5	100	99.295	Sarcophilus_harrisii
ENSSTOG00000010683	SMARCA5	99	86.948	ENSSFOG00015013252	SMARCA5	97	90.352	Scleropages_formosus
ENSSTOG00000010683	SMARCA5	96	95.285	ENSSPUG00000007604	SMARCA5	99	96.583	Sphenodon_punctatus
ENSSTOG00000010683	SMARCA5	99	98.481	ENSSSCG00000009047	SMARCA5	100	98.481	Sus_scrofa
ENSSTOG00000010683	SMARCA5	96	96.329	ENSTGUG00000002408	SMARCA5	100	96.329	Taeniopygia_guttata
ENSSTOG00000010683	SMARCA5	98	98.838	ENSUAMG00000023495	SMARCA5	99	98.838	Ursus_americanus
ENSSTOG00000010683	SMARCA5	95	99.402	ENSUMAG00000015324	SMARCA5	97	99.402	Ursus_maritimus
ENSSTOG00000010683	SMARCA5	99	98.670	ENSVPAG00000008982	SMARCA5	100	98.670	Vicugna_pacos
ENSSTOG00000010683	SMARCA5	99	98.765	ENSVVUG00000017473	SMARCA5	100	98.765	Vulpes_vulpes
ENSSTOG00000010683	SMARCA5	95	89.311	ENSXETG00000017566	smarca5	95	93.347	Xenopus_tropicalis