EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSTOG00000010757 (Gene tree)
Gene ID: 101974607
Gene Symbol: PUM1
Alias: KIAA0099|PUMH1
Full Name: pumilio RNA binding family member 1
Gene Type: protein_coding
Species: Ictidomys_tridecemlineatus
Status: putative
Strand: Minus strand
Length: 120205 bases
Position: chrJH393284.1:14243296-14363500
Accession: 101974607
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSTOP00000024734	PUF	PF00806.19	1.6e-70	1	8
ENSSTOP00000024734	PUF	PF00806.19	1.6e-70	2	8
ENSSTOP00000024734	PUF	PF00806.19	1.6e-70	3	8
ENSSTOP00000024734	PUF	PF00806.19	1.6e-70	4	8
ENSSTOP00000024734	PUF	PF00806.19	1.6e-70	5	8
ENSSTOP00000024734	PUF	PF00806.19	1.6e-70	6	8
ENSSTOP00000024734	PUF	PF00806.19	1.6e-70	7	8
ENSSTOP00000024734	PUF	PF00806.19	1.6e-70	8	8
ENSSTOP00000009663	PUF	PF00806.19	1.4e-69	1	8
ENSSTOP00000009663	PUF	PF00806.19	1.4e-69	2	8
ENSSTOP00000009663	PUF	PF00806.19	1.4e-69	3	8
ENSSTOP00000009663	PUF	PF00806.19	1.4e-69	4	8
ENSSTOP00000009663	PUF	PF00806.19	1.4e-69	5	8
ENSSTOP00000009663	PUF	PF00806.19	1.4e-69	6	8
ENSSTOP00000009663	PUF	PF00806.19	1.4e-69	7	8
ENSSTOP00000009663	PUF	PF00806.19	1.4e-69	8	8
ENSSTOP00000024134	PUF	PF00806.19	2.9e-69	1	8
ENSSTOP00000024134	PUF	PF00806.19	2.9e-69	2	8
ENSSTOP00000024134	PUF	PF00806.19	2.9e-69	3	8
ENSSTOP00000024134	PUF	PF00806.19	2.9e-69	4	8
ENSSTOP00000024134	PUF	PF00806.19	2.9e-69	5	8
ENSSTOP00000024134	PUF	PF00806.19	2.9e-69	6	8
ENSSTOP00000024134	PUF	PF00806.19	2.9e-69	7	8
ENSSTOP00000024134	PUF	PF00806.19	2.9e-69	8	8

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSTOT00000032708	PUM1-201	5663	XM_005317715	ENSSTOP00000024134	1188 (aa)	XP_005317772	A0A287CS72
ENSSTOT00000010769	PUM1-202	5375	XM_005317720	ENSSTOP00000009663	1092 (aa)	XP_005317777	I3MG32
ENSSTOT00000041820	PUM1-203	2835	-	ENSSTOP00000024734	944 (aa)	XP_021590652	A0A287CTX9

Gene Model

Click here to download ENSSTOG00000010757's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSTOG00000010757's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSTOG00000010757	PUM1	86	86.885	ENSSTOG00000006262	PUM2	100	88.406

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSTOG00000010757	PUM1	100	100.000	ENSG00000134644	PUM1	100	100.000	Homo_sapiens
ENSSTOG00000010757	PUM1	90	91.325	ENSAPOG00000021632	pum1	100	90.843	Acanthochromis_polyacanthus
ENSSTOG00000010757	PUM1	100	100.000	ENSAMEG00000017656	PUM1	97	99.244	Ailuropoda_melanoleuca
ENSSTOG00000010757	PUM1	100	81.312	ENSACIG00000021013	pum1	100	76.573	Amphilophus_citrinellus
ENSSTOG00000010757	PUM1	90	91.325	ENSAOCG00000003944	pum1	100	77.413	Amphiprion_ocellaris
ENSSTOG00000010757	PUM1	90	91.325	ENSAPEG00000014550	pum1	100	77.413	Amphiprion_percula
ENSSTOG00000010757	PUM1	100	81.312	ENSATEG00000016004	pum1	100	90.843	Anabas_testudineus
ENSSTOG00000010757	PUM1	100	97.761	ENSAPLG00000009351	PUM1	100	97.477	Anas_platyrhynchos
ENSSTOG00000010757	PUM1	100	96.139	ENSACAG00000000682	PUM1	98	95.623	Anolis_carolinensis
ENSSTOG00000010757	PUM1	100	100.000	ENSANAG00000027865	PUM1	100	100.000	Aotus_nancymaae
ENSSTOG00000010757	PUM1	90	76.738	ENSACLG00000019354	pum1	100	79.001	Astatotilapia_calliptera
ENSSTOG00000010757	PUM1	100	84.491	ENSAMXG00000020607	pum1	96	79.181	Astyanax_mexicanus
ENSSTOG00000010757	PUM1	100	100.000	ENSBTAG00000018979	PUM1	100	100.000	Bos_taurus
ENSSTOG00000010757	PUM1	100	100.000	ENSCJAG00000006035	PUM1	100	100.000	Callithrix_jacchus
ENSSTOG00000010757	PUM1	100	100.000	ENSCAFG00000011205	PUM1	100	97.056	Canis_familiaris
ENSSTOG00000010757	PUM1	92	97.179	ENSCAFG00020024616	PUM1	99	98.577	Canis_lupus_dingo
ENSSTOG00000010757	PUM1	100	100.000	ENSCHIG00000012952	PUM1	100	99.327	Capra_hircus
ENSSTOG00000010757	PUM1	100	99.306	ENSTSYG00000008868	PUM1	100	99.306	Carlito_syrichta
ENSSTOG00000010757	PUM1	100	99.364	ENSCPOG00000031613	PUM1	100	99.364	Cavia_porcellus
ENSSTOG00000010757	PUM1	100	100.000	ENSCATG00000017991	PUM1	100	100.000	Cercocebus_atys
ENSSTOG00000010757	PUM1	100	99.451	ENSCLAG00000007662	PUM1	100	99.517	Chinchilla_lanigera
ENSSTOG00000010757	PUM1	100	100.000	ENSCSAG00000001028	PUM1	100	98.583	Chlorocebus_sabaeus
ENSSTOG00000010757	PUM1	92	100.000	ENSCHOG00000010245	PUM1	93	96.403	Choloepus_hoffmanni
ENSSTOG00000010757	PUM1	100	97.669	ENSCPBG00000009288	PUM1	100	97.669	Chrysemys_picta_bellii
ENSSTOG00000010757	PUM1	100	100.000	ENSCANG00000042606	PUM1	100	100.000	Colobus_angolensis_palliatus
ENSSTOG00000010757	PUM1	100	99.306	ENSCGRG00001024949	Pum1	100	99.306	Cricetulus_griseus_chok1gshd
ENSSTOG00000010757	PUM1	100	99.306	ENSCGRG00000014197	Pum1	100	99.306	Cricetulus_griseus_crigri
ENSSTOG00000010757	PUM1	85	81.041	ENSCSEG00000015981	pum1	100	77.613	Cynoglossus_semilaevis
ENSSTOG00000010757	PUM1	100	80.817	ENSCVAG00000007043	pum1	100	75.785	Cyprinodon_variegatus
ENSSTOG00000010757	PUM1	100	84.864	ENSDARG00000099256	pum1	100	79.599	Danio_rerio
ENSSTOG00000010757	PUM1	100	100.000	ENSDNOG00000010939	PUM1	100	98.907	Dasypus_novemcinctus
ENSSTOG00000010757	PUM1	85	99.517	ENSDORG00000001875	Pum1	100	99.517	Dipodomys_ordii
ENSSTOG00000010757	PUM1	85	100.000	ENSETEG00000004355	PUM1	87	93.652	Echinops_telfairi
ENSSTOG00000010757	PUM1	100	100.000	ENSEASG00005010813	PUM1	100	99.158	Equus_asinus_asinus
ENSSTOG00000010757	PUM1	100	99.306	ENSECAG00000021369	PUM1	100	98.991	Equus_caballus
ENSSTOG00000010757	PUM1	80	100.000	ENSEEUG00000003871	PUM1	74	100.000	Erinaceus_europaeus
ENSSTOG00000010757	PUM1	100	83.476	ENSELUG00000002409	pum1	100	83.787	Esox_lucius
ENSSTOG00000010757	PUM1	100	100.000	ENSFCAG00000010374	PUM1	100	100.000	Felis_catus
ENSSTOG00000010757	PUM1	100	96.292	ENSFALG00000001214	PUM1	97	95.980	Ficedula_albicollis
ENSSTOG00000010757	PUM1	100	99.359	ENSFDAG00000011319	PUM1	100	99.359	Fukomys_damarensis
ENSSTOG00000010757	PUM1	70	88.403	ENSGMOG00000010491	pum1	100	74.752	Gadus_morhua
ENSSTOG00000010757	PUM1	100	97.886	ENSGALG00000042598	PUM1	100	97.713	Gallus_gallus
ENSSTOG00000010757	PUM1	100	80.941	ENSGAFG00000015617	pum1	100	81.474	Gambusia_affinis
ENSSTOG00000010757	PUM1	100	81.034	ENSGACG00000005717	pum1	100	76.359	Gasterosteus_aculeatus
ENSSTOG00000010757	PUM1	100	97.388	ENSGAGG00000001290	PUM1	100	97.225	Gopherus_agassizii
ENSSTOG00000010757	PUM1	100	100.000	ENSGGOG00000011983	PUM1	100	100.000	Gorilla_gorilla
ENSSTOG00000010757	PUM1	100	81.064	ENSHBUG00000018718	pum1	100	76.364	Haplochromis_burtoni
ENSSTOG00000010757	PUM1	100	99.176	ENSHGLG00000013819	Pum1	100	99.176	Heterocephalus_glaber_female
ENSSTOG00000010757	PUM1	100	99.176	ENSHGLG00100008621	Pum1	100	99.176	Heterocephalus_glaber_male
ENSSTOG00000010757	PUM1	100	82.759	ENSIPUG00000020421	pum1	100	78.055	Ictalurus_punctatus
ENSSTOG00000010757	PUM1	100	100.000	ENSJJAG00000000530	Pum1	100	100.000	Jaculus_jaculus
ENSSTOG00000010757	PUM1	100	80.446	ENSKMAG00000003481	pum1	100	75.950	Kryptolebias_marmoratus
ENSSTOG00000010757	PUM1	100	80.421	ENSLBEG00000002527	pum1	100	75.911	Labrus_bergylta
ENSSTOG00000010757	PUM1	100	88.600	ENSLACG00000017188	PUM1	99	86.595	Latimeria_chalumnae
ENSSTOG00000010757	PUM1	100	91.553	ENSLOCG00000005210	pum1	99	88.230	Lepisosteus_oculatus
ENSSTOG00000010757	PUM1	100	98.654	ENSLAFG00000003178	PUM1	100	98.654	Loxodonta_africana
ENSSTOG00000010757	PUM1	100	100.000	ENSMFAG00000010291	PUM1	100	100.000	Macaca_fascicularis
ENSSTOG00000010757	PUM1	100	100.000	ENSMMUG00000013520	PUM1	100	100.000	Macaca_mulatta
ENSSTOG00000010757	PUM1	100	100.000	ENSMNEG00000034639	PUM1	100	100.000	Macaca_nemestrina
ENSSTOG00000010757	PUM1	100	100.000	ENSMLEG00000038743	PUM1	100	100.000	Mandrillus_leucophaeus
ENSSTOG00000010757	PUM1	100	81.064	ENSMAMG00000011606	pum1	100	76.446	Mastacembelus_armatus
ENSSTOG00000010757	PUM1	100	81.064	ENSMZEG00005005834	pum1	100	76.364	Maylandia_zebra
ENSSTOG00000010757	PUM1	100	97.512	ENSMGAG00000000724	PUM1	100	97.438	Meleagris_gallopavo
ENSSTOG00000010757	PUM1	100	99.359	ENSMAUG00000022090	Pum1	100	99.359	Mesocricetus_auratus
ENSSTOG00000010757	PUM1	99	97.887	ENSMICG00000012213	-	99	97.136	Microcebus_murinus
ENSSTOG00000010757	PUM1	100	99.359	ENSMICG00000007713	-	100	99.359	Microcebus_murinus
ENSSTOG00000010757	PUM1	100	99.176	ENSMOCG00000015463	Pum1	100	99.176	Microtus_ochrogaster
ENSSTOG00000010757	PUM1	90	88.046	ENSMMOG00000019817	pum1	100	90.602	Mola_mola
ENSSTOG00000010757	PUM1	100	97.647	ENSMODG00000017067	PUM1	100	97.647	Monodelphis_domestica
ENSSTOG00000010757	PUM1	90	88.276	ENSMALG00000016399	pum1	100	90.843	Monopterus_albus
ENSSTOG00000010757	PUM1	100	98.990	MGP_CAROLIEiJ_G0026549	Pum1	100	98.990	Mus_caroli
ENSSTOG00000010757	PUM1	100	99.306	ENSMUSG00000028580	Pum1	100	99.306	Mus_musculus
ENSSTOG00000010757	PUM1	100	99.306	MGP_PahariEiJ_G0028881	Pum1	100	99.306	Mus_pahari
ENSSTOG00000010757	PUM1	100	99.306	MGP_SPRETEiJ_G0027529	Pum1	100	99.306	Mus_spretus
ENSSTOG00000010757	PUM1	100	100.000	ENSMPUG00000015454	PUM1	100	99.074	Mustela_putorius_furo
ENSSTOG00000010757	PUM1	100	100.000	ENSMLUG00000006490	PUM1	100	98.907	Myotis_lucifugus
ENSSTOG00000010757	PUM1	100	99.682	ENSNGAG00000002378	Pum1	100	99.682	Nannospalax_galili
ENSSTOG00000010757	PUM1	100	78.452	ENSNBRG00000010689	pum1	100	83.457	Neolamprologus_brichardi
ENSSTOG00000010757	PUM1	100	99.306	ENSNLEG00000001151	PUM1	100	99.306	Nomascus_leucogenys
ENSSTOG00000010757	PUM1	80	100.000	ENSMEUG00000000976	-	75	97.297	Notamacropus_eugenii
ENSSTOG00000010757	PUM1	84	100.000	ENSOPRG00000001776	PUM1	73	100.000	Ochotona_princeps
ENSSTOG00000010757	PUM1	100	99.327	ENSODEG00000003465	PUM1	100	99.327	Octodon_degus
ENSSTOG00000010757	PUM1	100	81.618	ENSONIG00000002290	pum1	100	76.694	Oreochromis_niloticus
ENSSTOG00000010757	PUM1	81	77.766	ENSOANG00000004902	-	100	77.766	Ornithorhynchus_anatinus
ENSSTOG00000010757	PUM1	100	100.000	ENSOCUG00000008641	PUM1	99	98.991	Oryctolagus_cuniculus
ENSSTOG00000010757	PUM1	100	81.931	ENSORLG00000011482	pum1	100	76.112	Oryzias_latipes
ENSSTOG00000010757	PUM1	100	82.054	ENSORLG00020019461	pum1	100	76.112	Oryzias_latipes_hni
ENSSTOG00000010757	PUM1	100	82.054	ENSORLG00015011375	pum1	100	76.194	Oryzias_latipes_hsok
ENSSTOG00000010757	PUM1	90	92.530	ENSOMEG00000009312	pum1	100	76.834	Oryzias_melastigma
ENSSTOG00000010757	PUM1	100	99.306	ENSOGAG00000011063	PUM1	100	96.474	Otolemur_garnettii
ENSSTOG00000010757	PUM1	100	100.000	ENSOARG00000001899	PUM1	100	98.792	Ovis_aries
ENSSTOG00000010757	PUM1	100	100.000	ENSPPAG00000044003	PUM1	100	100.000	Pan_paniscus
ENSSTOG00000010757	PUM1	100	100.000	ENSPPRG00000001370	PUM1	100	100.000	Panthera_pardus
ENSSTOG00000010757	PUM1	100	100.000	ENSPTIG00000010798	PUM1	100	100.000	Panthera_tigris_altaica
ENSSTOG00000010757	PUM1	100	100.000	ENSPTRG00000000453	PUM1	100	100.000	Pan_troglodytes
ENSSTOG00000010757	PUM1	100	100.000	ENSPANG00000016338	PUM1	100	100.000	Papio_anubis
ENSSTOG00000010757	PUM1	100	82.497	ENSPKIG00000010578	pum1	100	78.135	Paramormyrops_kingsleyae
ENSSTOG00000010757	PUM1	100	97.880	ENSPSIG00000014118	PUM1	100	97.811	Pelodiscus_sinensis
ENSSTOG00000010757	PUM1	100	76.819	ENSPMGG00000005836	pum1	100	81.907	Periophthalmus_magnuspinnatus
ENSSTOG00000010757	PUM1	100	99.359	ENSPEMG00000010009	Pum1	100	99.359	Peromyscus_maniculatus_bairdii
ENSSTOG00000010757	PUM1	100	97.731	ENSPCIG00000014151	PUM1	100	97.761	Phascolarctos_cinereus
ENSSTOG00000010757	PUM1	93	83.744	ENSPFOG00000007289	pum1	99	82.416	Poecilia_formosa
ENSSTOG00000010757	PUM1	100	82.840	ENSPLAG00000007256	pum1	100	78.238	Poecilia_latipinna
ENSSTOG00000010757	PUM1	85	82.963	ENSPMEG00000019543	pum1	99	78.381	Poecilia_mexicana
ENSSTOG00000010757	PUM1	100	80.941	ENSPREG00000005195	pum1	100	80.970	Poecilia_reticulata
ENSSTOG00000010757	PUM1	100	100.000	ENSPPYG00000001621	PUM1	100	97.607	Pongo_abelii
ENSSTOG00000010757	PUM1	84	99.174	ENSPCAG00000001979	PUM1	74	99.174	Procavia_capensis
ENSSTOG00000010757	PUM1	100	99.359	ENSPCOG00000004398	PUM1	100	99.359	Propithecus_coquereli
ENSSTOG00000010757	PUM1	100	100.000	ENSPVAG00000005207	PUM1	97	97.222	Pteropus_vampyrus
ENSSTOG00000010757	PUM1	100	81.064	ENSPNYG00000009518	pum1	100	81.446	Pundamilia_nyererei
ENSSTOG00000010757	PUM1	100	84.739	ENSPNAG00000026728	pum1	100	80.585	Pygocentrus_nattereri
ENSSTOG00000010757	PUM1	100	99.306	ENSRNOG00000011709	Pum1	100	99.074	Rattus_norvegicus
ENSSTOG00000010757	PUM1	100	100.000	ENSRBIG00000042521	PUM1	100	100.000	Rhinopithecus_bieti
ENSSTOG00000010757	PUM1	100	100.000	ENSRROG00000020156	PUM1	100	100.000	Rhinopithecus_roxellana
ENSSTOG00000010757	PUM1	100	100.000	ENSSBOG00000032037	PUM1	100	100.000	Saimiri_boliviensis_boliviensis
ENSSTOG00000010757	PUM1	100	97.563	ENSSHAG00000010918	PUM1	100	97.563	Sarcophilus_harrisii
ENSSTOG00000010757	PUM1	100	81.064	ENSSMAG00000010918	pum1	100	90.843	Scophthalmus_maximus
ENSSTOG00000010757	PUM1	100	81.188	ENSSDUG00000009021	pum1	100	76.694	Seriola_dumerili
ENSSTOG00000010757	PUM1	100	81.188	ENSSLDG00000009667	pum1	100	78.756	Seriola_lalandi_dorsalis
ENSSTOG00000010757	PUM1	99	100.000	ENSSARG00000003055	PUM1	91	100.000	Sorex_araneus
ENSSTOG00000010757	PUM1	100	97.634	ENSSPUG00000006267	PUM1	100	97.054	Sphenodon_punctatus
ENSSTOG00000010757	PUM1	90	91.325	ENSSPAG00000016636	pum1	100	77.413	Stegastes_partitus
ENSSTOG00000010757	PUM1	100	100.000	ENSSSCG00000003591	PUM1	100	100.000	Sus_scrofa
ENSSTOG00000010757	PUM1	100	81.064	ENSTRUG00000013121	pum1	100	83.086	Takifugu_rubripes
ENSSTOG00000010757	PUM1	100	80.841	ENSTNIG00000016983	pum1	99	76.680	Tetraodon_nigroviridis
ENSSTOG00000010757	PUM1	84	100.000	ENSTBEG00000013810	PUM1	89	96.341	Tupaia_belangeri
ENSSTOG00000010757	PUM1	92	99.361	ENSTTRG00000007436	PUM1	90	99.361	Tursiops_truncatus
ENSSTOG00000010757	PUM1	98	100.000	ENSUAMG00000018262	-	100	98.985	Ursus_americanus
ENSSTOG00000010757	PUM1	95	99.275	ENSUMAG00000009211	PUM1	100	99.275	Ursus_maritimus
ENSSTOG00000010757	PUM1	100	99.306	ENSVPAG00000005902	PUM1	92	99.661	Vicugna_pacos
ENSSTOG00000010757	PUM1	100	100.000	ENSVVUG00000014631	PUM1	100	99.327	Vulpes_vulpes
ENSSTOG00000010757	PUM1	100	88.323	ENSXETG00000012904	pum1	99	87.238	Xenopus_tropicalis
ENSSTOG00000010757	PUM1	100	80.941	ENSXMAG00000002945	pum1	100	78.031	Xiphophorus_maculatus