EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSTOG00000010791 (Gene tree)
Gene ID: 101961255
Gene Symbol: -
Alias: -
Full Name: RAD54 homolog B
Gene Type: protein_coding
Species: Ictidomys_tridecemlineatus
Status: putative
Strand: Minus strand
Length: 101846 bases
Position: chrJH393354.1:7373508-7475353
Accession: 101961255
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSTOP00000009686	ResIII	PF04851.15	7.5e-12	1	1
ENSSTOP00000031466	ResIII	PF04851.15	7.6e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSTOT00000010794	-	2746	XM_005328657	ENSSTOP00000009686	911 (aa)	XP_005328714	I3MG47
ENSSTOT00000036219	-	5055	-	ENSSTOP00000031466	917 (aa)	XP_021584345	A0A287DD96

Gene Model

Click here to download ENSSTOG00000010791's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSTOG00000010791's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSTOG00000010791	-	60	32.570	ENSSTOG00000014524	SMARCA1	50	32.570
ENSSTOG00000010791	-	52	34.466	ENSSTOG00000021976	HELLS	54	34.466
ENSSTOG00000010791	-	63	47.789	ENSSTOG00000029125	RAD54L	77	47.789

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSTOG00000010791	-	99	85.099	ENSG00000197275	RAD54B	99	85.099	Homo_sapiens
ENSSTOG00000010791	-	79	88.750	ENSG00000265817	FSBP	99	88.750	Homo_sapiens
ENSSTOG00000010791	-	99	83.554	ENSAMEG00000005834	-	99	83.554	Ailuropoda_melanoleuca
ENSSTOG00000010791	-	99	53.693	ENSACIG00000013005	rad54b	99	53.450	Amphilophus_citrinellus
ENSSTOG00000010791	-	99	54.095	ENSAOCG00000008523	rad54b	99	54.095	Amphiprion_ocellaris
ENSSTOG00000010791	-	99	54.024	ENSAPEG00000001673	rad54b	99	54.245	Amphiprion_percula
ENSSTOG00000010791	-	99	53.465	ENSATEG00000001527	rad54b	99	53.465	Anabas_testudineus
ENSSTOG00000010791	-	99	66.739	ENSAPLG00000014366	-	99	66.739	Anas_platyrhynchos
ENSSTOG00000010791	-	87	69.260	ENSACAG00000003671	-	99	69.260	Anolis_carolinensis
ENSSTOG00000010791	-	71	86.781	ENSANAG00000019528	-	99	86.781	Aotus_nancymaae
ENSSTOG00000010791	-	99	53.914	ENSACLG00000007826	rad54b	99	53.914	Astatotilapia_calliptera
ENSSTOG00000010791	-	85	56.927	ENSAMXG00000039985	rad54b	95	56.382	Astyanax_mexicanus
ENSSTOG00000010791	-	99	81.989	ENSBTAG00000000632	RAD54B	99	81.989	Bos_taurus
ENSSTOG00000010791	-	78	35.744	WBGene00013792	Y116A8C.13	93	34.061	Caenorhabditis_elegans
ENSSTOG00000010791	-	99	83.775	ENSCJAG00000000080	-	99	87.083	Callithrix_jacchus
ENSSTOG00000010791	-	99	81.567	ENSCAFG00000009179	RAD54B	99	81.567	Canis_familiaris
ENSSTOG00000010791	-	99	81.567	ENSCAFG00020012084	-	99	81.567	Canis_lupus_dingo
ENSSTOG00000010791	-	99	81.657	ENSCHIG00000008230	-	99	81.657	Capra_hircus
ENSSTOG00000010791	-	99	84.641	ENSTSYG00000013234	-	99	84.641	Carlito_syrichta
ENSSTOG00000010791	-	99	83.352	ENSCPOG00000011643	-	99	83.352	Cavia_porcellus
ENSSTOG00000010791	-	99	83.757	ENSCCAG00000011754	-	99	87.065	Cebus_capucinus
ENSSTOG00000010791	-	99	84.547	ENSCATG00000030661	-	99	88.194	Cercocebus_atys
ENSSTOG00000010791	-	99	84.018	ENSCLAG00000010476	-	99	84.018	Chinchilla_lanigera
ENSSTOG00000010791	-	99	84.437	ENSCSAG00000012712	-	99	84.437	Chlorocebus_sabaeus
ENSSTOG00000010791	-	99	67.500	ENSCPBG00000003204	-	99	68.514	Chrysemys_picta_bellii
ENSSTOG00000010791	-	99	84.547	ENSCANG00000017939	-	99	88.056	Colobus_angolensis_palliatus
ENSSTOG00000010791	-	99	79.023	ENSCGRG00001020184	Rad54b	99	79.023	Cricetulus_griseus_chok1gshd
ENSSTOG00000010791	-	99	78.024	ENSCGRG00000016752	Rad54b	99	78.024	Cricetulus_griseus_crigri
ENSSTOG00000010791	-	99	53.032	ENSCSEG00000001601	rad54b	99	53.032	Cynoglossus_semilaevis
ENSSTOG00000010791	-	99	55.969	ENSCVAG00000009200	rad54b	99	55.969	Cyprinodon_variegatus
ENSSTOG00000010791	-	99	52.884	ENSDARG00000092134	rad54b	99	60.465	Danio_rerio
ENSSTOG00000010791	-	99	80.947	ENSDNOG00000015535	-	99	80.947	Dasypus_novemcinctus
ENSSTOG00000010791	-	99	82.281	ENSDORG00000002492	Rad54b	99	82.281	Dipodomys_ordii
ENSSTOG00000010791	-	86	79.924	ENSETEG00000010605	-	100	79.924	Echinops_telfairi
ENSSTOG00000010791	-	99	46.502	ENSEBUG00000009104	rad54b	98	46.088	Eptatretus_burgeri
ENSSTOG00000010791	-	96	82.326	ENSEASG00005004021	-	99	82.326	Equus_asinus_asinus
ENSSTOG00000010791	-	99	82.854	ENSECAG00000021949	-	99	82.854	Equus_caballus
ENSSTOG00000010791	-	82	81.290	ENSEEUG00000008056	-	82	81.290	Erinaceus_europaeus
ENSSTOG00000010791	-	86	57.323	ENSELUG00000009287	rad54b	84	57.323	Esox_lucius
ENSSTOG00000010791	-	99	83.885	ENSFCAG00000015513	-	99	88.333	Felis_catus
ENSSTOG00000010791	-	99	66.159	ENSFALG00000005467	-	99	66.159	Ficedula_albicollis
ENSSTOG00000010791	-	99	84.292	ENSFDAG00000020541	-	99	84.292	Fukomys_damarensis
ENSSTOG00000010791	-	88	56.650	ENSFHEG00000014382	rad54b	88	56.650	Fundulus_heteroclitus
ENSSTOG00000010791	-	85	55.626	ENSGMOG00000014774	rad54b	98	55.626	Gadus_morhua
ENSSTOG00000010791	-	99	65.939	ENSGALG00000043597	RAD54B	99	65.939	Gallus_gallus
ENSSTOG00000010791	-	99	54.180	ENSGAFG00000007901	rad54b	99	54.180	Gambusia_affinis
ENSSTOG00000010791	-	99	52.859	ENSGACG00000009128	rad54b	100	52.859	Gasterosteus_aculeatus
ENSSTOG00000010791	-	99	67.391	ENSGAGG00000018747	-	100	67.391	Gopherus_agassizii
ENSSTOG00000010791	-	99	84.972	ENSGGOG00000023516	-	99	84.972	Gorilla_gorilla
ENSSTOG00000010791	-	99	53.212	ENSHBUG00000016017	rad54b	99	53.175	Haplochromis_burtoni
ENSSTOG00000010791	-	99	82.857	ENSHGLG00000008263	RAD54B	99	82.857	Heterocephalus_glaber_female
ENSSTOG00000010791	-	99	82.096	ENSHGLG00100008108	-	99	82.096	Heterocephalus_glaber_male
ENSSTOG00000010791	-	99	52.637	ENSHCOG00000004764	rad54b	98	54.724	Hippocampus_comes
ENSSTOG00000010791	-	99	52.033	ENSIPUG00000018531	rad54b	100	52.033	Ictalurus_punctatus
ENSSTOG00000010791	-	99	81.567	ENSJJAG00000010314	Rad54b	99	81.567	Jaculus_jaculus
ENSSTOG00000010791	-	88	55.854	ENSKMAG00000004744	rad54b	94	55.854	Kryptolebias_marmoratus
ENSSTOG00000010791	-	82	67.420	ENSLACG00000000859	-	100	67.420	Latimeria_chalumnae
ENSSTOG00000010791	-	99	57.295	ENSLOCG00000010100	rad54b	96	61.934	Lepisosteus_oculatus
ENSSTOG00000010791	-	88	83.250	ENSLAFG00000015315	-	99	83.250	Loxodonta_africana
ENSSTOG00000010791	-	99	84.327	ENSMFAG00000031629	-	99	87.917	Macaca_fascicularis
ENSSTOG00000010791	-	99	84.327	ENSMMUG00000005659	-	99	84.327	Macaca_mulatta
ENSSTOG00000010791	-	99	84.420	ENSMNEG00000016408	-	99	84.420	Macaca_nemestrina
ENSSTOG00000010791	-	99	84.547	ENSMLEG00000006946	-	99	84.547	Mandrillus_leucophaeus
ENSSTOG00000010791	-	99	54.913	ENSMAMG00000012269	rad54b	99	54.913	Mastacembelus_armatus
ENSSTOG00000010791	-	99	53.276	ENSMZEG00005005281	rad54b	95	58.460	Maylandia_zebra
ENSSTOG00000010791	-	99	65.693	ENSMGAG00000012024	-	99	65.693	Meleagris_gallopavo
ENSSTOG00000010791	-	99	77.691	ENSMAUG00000013586	Rad54b	99	77.691	Mesocricetus_auratus
ENSSTOG00000010791	-	99	80.863	ENSMICG00000000754	-	96	85.938	Microcebus_murinus
ENSSTOG00000010791	-	99	77.691	ENSMOCG00000020035	Rad54b	99	77.691	Microtus_ochrogaster
ENSSTOG00000010791	-	99	53.275	ENSMMOG00000003394	rad54b	99	53.275	Mola_mola
ENSSTOG00000010791	-	88	75.625	ENSMODG00000007343	-	99	75.625	Monodelphis_domestica
ENSSTOG00000010791	-	70	59.624	ENSMALG00000001520	rad54b	99	59.624	Monopterus_albus
ENSSTOG00000010791	-	99	77.987	MGP_CAROLIEiJ_G0025810	Rad54b	99	77.987	Mus_caroli
ENSSTOG00000010791	-	99	77.298	ENSMUSG00000078773	Rad54b	99	77.298	Mus_musculus
ENSSTOG00000010791	-	99	77.876	MGP_PahariEiJ_G0023933	Rad54b	99	77.876	Mus_pahari
ENSSTOG00000010791	-	99	78.429	MGP_SPRETEiJ_G0026758	Rad54b	99	78.429	Mus_spretus
ENSSTOG00000010791	-	88	85.393	ENSMPUG00000008878	-	99	85.393	Mustela_putorius_furo
ENSSTOG00000010791	-	99	80.684	ENSMLUG00000008953	-	99	80.684	Myotis_lucifugus
ENSSTOG00000010791	-	99	81.015	ENSNGAG00000017537	Rad54b	99	81.015	Nannospalax_galili
ENSSTOG00000010791	-	99	54.176	ENSNBRG00000013394	rad54b	99	54.176	Neolamprologus_brichardi
ENSSTOG00000010791	-	99	84.879	ENSNLEG00000003062	-	99	88.611	Nomascus_leucogenys
ENSSTOG00000010791	-	71	72.569	ENSMEUG00000012426	-	71	72.569	Notamacropus_eugenii
ENSSTOG00000010791	-	88	78.098	ENSODEG00000002650	-	95	85.404	Octodon_degus
ENSSTOG00000010791	-	99	82.667	ENSODEG00000019564	-	99	82.667	Octodon_degus
ENSSTOG00000010791	-	99	53.618	ENSONIG00000006067	rad54b	99	53.618	Oreochromis_niloticus
ENSSTOG00000010791	-	82	75.234	ENSOANG00000011348	-	99	75.234	Ornithorhynchus_anatinus
ENSSTOG00000010791	-	99	82.633	ENSOCUG00000016478	-	99	82.633	Oryctolagus_cuniculus
ENSSTOG00000010791	-	99	53.871	ENSORLG00000008918	rad54b	99	61.778	Oryzias_latipes
ENSSTOG00000010791	-	70	61.778	ENSORLG00020012171	rad54b	99	61.778	Oryzias_latipes_hni
ENSSTOG00000010791	-	99	53.439	ENSORLG00015018536	rad54b	99	53.439	Oryzias_latipes_hsok
ENSSTOG00000010791	-	84	59.144	ENSOMEG00000004345	rad54b	99	59.144	Oryzias_melastigma
ENSSTOG00000010791	-	99	82.983	ENSOGAG00000007854	-	99	82.983	Otolemur_garnettii
ENSSTOG00000010791	-	88	84.184	ENSOARG00000007691	-	99	84.184	Ovis_aries
ENSSTOG00000010791	-	99	83.646	ENSPPAG00000029572	-	99	83.554	Pan_paniscus
ENSSTOG00000010791	-	99	84.106	ENSPPRG00000007571	-	99	88.472	Panthera_pardus
ENSSTOG00000010791	-	79	88.333	ENSPTIG00000012670	-	99	88.333	Panthera_tigris_altaica
ENSSTOG00000010791	-	99	85.083	ENSPTRG00000020427	-	99	88.611	Pan_troglodytes
ENSSTOG00000010791	-	99	84.658	ENSPANG00000019566	-	99	84.658	Papio_anubis
ENSSTOG00000010791	-	99	56.526	ENSPKIG00000014974	rad54b	100	56.526	Paramormyrops_kingsleyae
ENSSTOG00000010791	-	99	65.543	ENSPSIG00000002383	-	98	69.900	Pelodiscus_sinensis
ENSSTOG00000010791	-	99	79.134	ENSPEMG00000012133	Rad54b	99	79.134	Peromyscus_maniculatus_bairdii
ENSSTOG00000010791	-	87	56.203	ENSPMAG00000002916	rad54b	99	56.824	Petromyzon_marinus
ENSSTOG00000010791	-	88	76.971	ENSPCIG00000020151	-	94	76.625	Phascolarctos_cinereus
ENSSTOG00000010791	-	99	53.895	ENSPFOG00000023411	rad54b	99	53.895	Poecilia_formosa
ENSSTOG00000010791	-	99	54.105	ENSPLAG00000010430	rad54b	99	54.105	Poecilia_latipinna
ENSSTOG00000010791	-	99	53.717	ENSPMEG00000016873	rad54b	97	57.882	Poecilia_mexicana
ENSSTOG00000010791	-	99	54.506	ENSPREG00000018443	rad54b	99	54.506	Poecilia_reticulata
ENSSTOG00000010791	-	99	84.768	ENSPPYG00000018750	-	99	84.768	Pongo_abelii
ENSSTOG00000010791	-	99	84.641	ENSPCOG00000026845	-	99	87.639	Propithecus_coquereli
ENSSTOG00000010791	-	86	86.005	ENSPVAG00000000261	-	91	86.005	Pteropus_vampyrus
ENSSTOG00000010791	-	86	58.831	ENSPNYG00000018303	rad54b	95	58.831	Pundamilia_nyererei
ENSSTOG00000010791	-	99	53.747	ENSPNAG00000000295	rad54b	99	53.747	Pygocentrus_nattereri
ENSSTOG00000010791	-	99	75.250	ENSRNOG00000039949	Rad54b	99	75.250	Rattus_norvegicus
ENSSTOG00000010791	-	99	84.106	ENSRBIG00000020419	-	99	84.106	Rhinopithecus_bieti
ENSSTOG00000010791	-	99	84.106	ENSRROG00000039897	-	99	84.106	Rhinopithecus_roxellana
ENSSTOG00000010791	-	78	37.883	YBR073W	RDH54	78	37.500	Saccharomyces_cerevisiae
ENSSTOG00000010791	-	99	83.885	ENSSBOG00000028501	-	99	83.885	Saimiri_boliviensis_boliviensis
ENSSTOG00000010791	-	99	71.965	ENSSHAG00000017038	-	99	71.965	Sarcophilus_harrisii
ENSSTOG00000010791	-	66	62.810	ENSSFOG00015008483	rad54b	93	62.810	Scleropages_formosus
ENSSTOG00000010791	-	99	53.032	ENSSMAG00000018659	rad54b	99	53.142	Scophthalmus_maximus
ENSSTOG00000010791	-	98	53.135	ENSSDUG00000001122	rad54b	98	53.241	Seriola_dumerili
ENSSTOG00000010791	-	99	53.016	ENSSLDG00000013787	rad54b	99	53.122	Seriola_lalandi_dorsalis
ENSSTOG00000010791	-	99	65.639	ENSSPUG00000016497	-	99	65.639	Sphenodon_punctatus
ENSSTOG00000010791	-	99	54.486	ENSSPAG00000012800	rad54b	99	54.486	Stegastes_partitus
ENSSTOG00000010791	-	99	81.174	ENSSSCG00000006101	-	99	85.606	Sus_scrofa
ENSSTOG00000010791	-	99	66.449	ENSTGUG00000011880	-	100	66.449	Taeniopygia_guttata
ENSSTOG00000010791	-	86	58.228	ENSTRUG00000010015	rad54b	99	52.985	Takifugu_rubripes
ENSSTOG00000010791	-	99	79.227	ENSTTRG00000006312	-	99	79.227	Tursiops_truncatus
ENSSTOG00000010791	-	99	83.554	ENSUMAG00000016401	-	99	83.554	Ursus_maritimus
ENSSTOG00000010791	-	99	81.236	ENSVPAG00000003157	-	99	81.236	Vicugna_pacos
ENSSTOG00000010791	-	99	54.586	ENSXETG00000025924	rad54b	99	59.119	Xenopus_tropicalis
ENSSTOG00000010791	-	99	54.063	ENSXMAG00000013141	rad54b	99	54.063	Xiphophorus_maculatus