EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSTOG00000010866 (Gene tree)
Gene ID: 101978110
Gene Symbol: SRSF6
Alias: B52|SFRS6|SRP55
Full Name: serine and arginine rich splicing factor 6
Gene Type: protein_coding
Species: Ictidomys_tridecemlineatus
Status: putative
Strand: Minus strand
Length: 6149 bases
Position: chrJH393340.1:3086680-3092828
Accession: 101978110
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSTOP00000009749	RRM_1	PF00076.22	8.9e-33	1	2
ENSSTOP00000009749	RRM_1	PF00076.22	8.9e-33	2	2
ENSSTOP00000029678	RRM_1	PF00076.22	2.1e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSTOT00000010867	SRSF6-201	4200	XM_005327131	ENSSTOP00000009749	342 (aa)	XP_005327188	I3MG92
ENSSTOT00000031027	SRSF6-202	408	-	ENSSTOP00000029678	135 (aa)	-	A0A287D817

Gene Model

Click here to download ENSSTOG00000010866's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSTOG00000010866's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSTOG00000010866	SRSF6	50	71.642	ENSSTOG00000020672	SRSF5	67	64.130
ENSSTOG00000010866	SRSF6	56	48.101	ENSSTOG00000004389	SRSF7	58	48.101
ENSSTOG00000010866	SRSF6	58	40.670	ENSSTOG00000000243	-	82	42.857
ENSSTOG00000010866	SRSF6	55	38.961	ENSSTOG00000032014	-	51	38.961
ENSSTOG00000010866	SRSF6	62	32.143	ENSSTOG00000022811	RBM4	59	32.143
ENSSTOG00000010866	SRSF6	51	47.297	ENSSTOG00000007344	SRSF9	71	41.143

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSTOG00000010866	SRSF6	100	100.000	ENSG00000124193	SRSF6	100	100.000	Homo_sapiens
ENSSTOG00000010866	SRSF6	58	93.590	ENSAPOG00000016635	-	84	81.618	Acanthochromis_polyacanthus
ENSSTOG00000010866	SRSF6	94	85.231	ENSAMEG00000003710	SRSF6	94	84.969	Ailuropoda_melanoleuca
ENSSTOG00000010866	SRSF6	63	87.059	ENSACIG00000020091	-	95	80.315	Amphilophus_citrinellus
ENSSTOG00000010866	SRSF6	87	68.581	ENSACIG00000023658	-	56	87.778	Amphilophus_citrinellus
ENSSTOG00000010866	SRSF6	92	67.939	ENSAOCG00000019438	-	98	67.939	Amphiprion_ocellaris
ENSSTOG00000010866	SRSF6	65	82.955	ENSAOCG00000004309	-	57	83.152	Amphiprion_ocellaris
ENSSTOG00000010866	SRSF6	98	61.871	ENSAPEG00000013086	-	53	88.172	Amphiprion_percula
ENSSTOG00000010866	SRSF6	63	84.706	ENSAPEG00000020746	-	66	79.787	Amphiprion_percula
ENSSTOG00000010866	SRSF6	66	83.146	ENSATEG00000007255	-	71	80.000	Anabas_testudineus
ENSSTOG00000010866	SRSF6	94	82.407	ENSACAG00000002061	SRSF6	93	84.923	Anolis_carolinensis
ENSSTOG00000010866	SRSF6	100	100.000	ENSANAG00000024080	SRSF6	100	100.000	Aotus_nancymaae
ENSSTOG00000010866	SRSF6	54	89.041	ENSACLG00000024373	-	96	79.570	Astatotilapia_calliptera
ENSSTOG00000010866	SRSF6	55	91.892	ENSAMXG00000042692	-	96	78.519	Astyanax_mexicanus
ENSSTOG00000010866	SRSF6	55	93.243	ENSAMXG00000003101	-	51	85.789	Astyanax_mexicanus
ENSSTOG00000010866	SRSF6	100	99.259	ENSBTAG00000008527	SRSF6	100	99.259	Bos_taurus
ENSSTOG00000010866	SRSF6	100	100.000	ENSCJAG00000048403	SRSF6	100	100.000	Callithrix_jacchus
ENSSTOG00000010866	SRSF6	100	99.259	ENSCAFG00000009289	SRSF6	100	99.259	Canis_familiaris
ENSSTOG00000010866	SRSF6	100	99.259	ENSCAFG00020013559	SRSF6	100	99.259	Canis_lupus_dingo
ENSSTOG00000010866	SRSF6	100	99.259	ENSCHIG00000015890	-	100	99.259	Capra_hircus
ENSSTOG00000010866	SRSF6	100	95.942	ENSCHIG00000009148	-	100	95.942	Capra_hircus
ENSSTOG00000010866	SRSF6	94	81.677	ENSTSYG00000026476	SRSF6	93	78.769	Carlito_syrichta
ENSSTOG00000010866	SRSF6	100	100.000	ENSCPOG00000011761	SRSF6	100	100.000	Cavia_porcellus
ENSSTOG00000010866	SRSF6	94	71.296	ENSCCAG00000018540	-	62	87.234	Cebus_capucinus
ENSSTOG00000010866	SRSF6	100	100.000	ENSCCAG00000026018	-	100	100.000	Cebus_capucinus
ENSSTOG00000010866	SRSF6	100	100.000	ENSCATG00000030794	SRSF6	100	100.000	Cercocebus_atys
ENSSTOG00000010866	SRSF6	100	100.000	ENSCLAG00000010247	SRSF6	100	100.000	Chinchilla_lanigera
ENSSTOG00000010866	SRSF6	100	98.251	ENSCSAG00000014022	SRSF6	100	98.251	Chlorocebus_sabaeus
ENSSTOG00000010866	SRSF6	79	100.000	ENSCHOG00000000561	SRSF6	100	82.319	Choloepus_hoffmanni
ENSSTOG00000010866	SRSF6	58	97.436	ENSCPBG00000018200	SRSF6	94	84.756	Chrysemys_picta_bellii
ENSSTOG00000010866	SRSF6	100	97.959	ENSCANG00000037774	-	100	97.959	Colobus_angolensis_palliatus
ENSSTOG00000010866	SRSF6	100	83.673	ENSCANG00000042529	-	100	83.673	Colobus_angolensis_palliatus
ENSSTOG00000010866	SRSF6	100	98.519	ENSCGRG00001022339	Srsf6	100	98.519	Cricetulus_griseus_chok1gshd
ENSSTOG00000010866	SRSF6	62	96.244	ENSCGRG00000006618	Srsf6	100	96.244	Cricetulus_griseus_crigri
ENSSTOG00000010866	SRSF6	58	93.590	ENSCSEG00000019778	SRSF6	90	84.252	Cynoglossus_semilaevis
ENSSTOG00000010866	SRSF6	58	92.308	ENSCVAG00000001863	SRSF6	95	85.039	Cyprinodon_variegatus
ENSSTOG00000010866	SRSF6	55	90.541	ENSDARG00000016783	srsf6b	87	89.157	Danio_rerio
ENSSTOG00000010866	SRSF6	94	95.370	ENSDNOG00000008410	SRSF6	94	95.370	Dasypus_novemcinctus
ENSSTOG00000010866	SRSF6	100	100.000	ENSDORG00000028378	Srsf6	100	100.000	Dipodomys_ordii
ENSSTOG00000010866	SRSF6	93	92.500	ENSETEG00000006221	SRSF6	94	89.846	Echinops_telfairi
ENSSTOG00000010866	SRSF6	94	95.370	ENSEASG00005023429	SRSF6	94	96.000	Equus_asinus_asinus
ENSSTOG00000010866	SRSF6	94	95.370	ENSECAG00000023932	SRSF6	94	96.000	Equus_caballus
ENSSTOG00000010866	SRSF6	56	93.846	ENSEEUG00000002324	SRSF6	90	93.939	Erinaceus_europaeus
ENSSTOG00000010866	SRSF6	98	59.286	ENSELUG00000024182	SRSF6	85	87.356	Esox_lucius
ENSSTOG00000010866	SRSF6	89	65.686	ENSELUG00000013506	SRSF6	88	77.778	Esox_lucius
ENSSTOG00000010866	SRSF6	100	96.232	ENSFCAG00000032814	SRSF6	100	96.232	Felis_catus
ENSSTOG00000010866	SRSF6	100	82.558	ENSFDAG00000012191	SRSF6	100	82.558	Fukomys_damarensis
ENSSTOG00000010866	SRSF6	87	70.820	ENSFHEG00000023065	srsf6a	55	87.500	Fundulus_heteroclitus
ENSSTOG00000010866	SRSF6	61	76.829	ENSGMOG00000006105	srsf6a	62	70.391	Gadus_morhua
ENSSTOG00000010866	SRSF6	56	90.789	ENSGMOG00000014458	srsf6a	52	78.646	Gadus_morhua
ENSSTOG00000010866	SRSF6	100	97.037	ENSGALG00000000990	SRSF6	100	97.037	Gallus_gallus
ENSSTOG00000010866	SRSF6	58	92.308	ENSGAFG00000019088	-	72	82.400	Gambusia_affinis
ENSSTOG00000010866	SRSF6	98	61.194	ENSGACG00000006084	srsf6a	53	83.871	Gasterosteus_aculeatus
ENSSTOG00000010866	SRSF6	58	97.436	ENSGAGG00000003238	SRSF6	94	84.756	Gopherus_agassizii
ENSSTOG00000010866	SRSF6	100	100.000	ENSGGOG00000009808	SRSF6	100	100.000	Gorilla_gorilla
ENSSTOG00000010866	SRSF6	100	60.116	ENSHBUG00000006386	-	58	83.696	Haplochromis_burtoni
ENSSTOG00000010866	SRSF6	91	76.358	ENSHGLG00000007701	-	58	79.679	Heterocephalus_glaber_female
ENSSTOG00000010866	SRSF6	100	100.000	ENSHGLG00000007348	SRSF6	100	100.000	Heterocephalus_glaber_female
ENSSTOG00000010866	SRSF6	100	83.430	ENSHGLG00100005043	SRSF6	100	83.430	Heterocephalus_glaber_male
ENSSTOG00000010866	SRSF6	58	89.744	ENSHCOG00000002740	srsf6a	57	83.152	Hippocampus_comes
ENSSTOG00000010866	SRSF6	58	92.308	ENSIPUG00000004776	-	72	72.103	Ictalurus_punctatus
ENSSTOG00000010866	SRSF6	56	95.288	ENSJJAG00000020690	Srsf6	91	95.337	Jaculus_jaculus
ENSSTOG00000010866	SRSF6	54	93.151	ENSKMAG00000011934	srsf6a	59	85.870	Kryptolebias_marmoratus
ENSSTOG00000010866	SRSF6	58	92.308	ENSLBEG00000007356	srsf6a	52	85.484	Labrus_bergylta
ENSSTOG00000010866	SRSF6	89	82.903	ENSLACG00000005466	SRSF6	54	91.848	Latimeria_chalumnae
ENSSTOG00000010866	SRSF6	69	94.979	ENSLAFG00000006682	SRSF6	89	94.783	Loxodonta_africana
ENSSTOG00000010866	SRSF6	100	100.000	ENSMFAG00000036925	SRSF6	100	100.000	Macaca_fascicularis
ENSSTOG00000010866	SRSF6	100	100.000	ENSMMUG00000006742	SRSF6	100	100.000	Macaca_mulatta
ENSSTOG00000010866	SRSF6	100	96.793	ENSMNEG00000038270	-	100	96.793	Macaca_nemestrina
ENSSTOG00000010866	SRSF6	100	98.519	ENSMNEG00000027392	-	100	98.519	Macaca_nemestrina
ENSSTOG00000010866	SRSF6	62	97.196	ENSMLEG00000031524	SRSF6	100	97.196	Mandrillus_leucophaeus
ENSSTOG00000010866	SRSF6	98	61.871	ENSMAMG00000017161	srsf6a	53	87.634	Mastacembelus_armatus
ENSSTOG00000010866	SRSF6	63	87.059	ENSMAMG00000023477	-	89	87.059	Mastacembelus_armatus
ENSSTOG00000010866	SRSF6	98	58.333	ENSMZEG00005020658	-	60	82.873	Maylandia_zebra
ENSSTOG00000010866	SRSF6	56	89.474	ENSMZEG00005008032	-	57	83.696	Maylandia_zebra
ENSSTOG00000010866	SRSF6	100	98.519	ENSMAUG00000019086	-	100	98.519	Mesocricetus_auratus
ENSSTOG00000010866	SRSF6	100	100.000	ENSMICG00000008537	SRSF6	100	100.000	Microcebus_murinus
ENSSTOG00000010866	SRSF6	62	96.244	ENSMOCG00000018738	Srsf6	100	96.244	Microtus_ochrogaster
ENSSTOG00000010866	SRSF6	58	92.308	ENSMMOG00000015241	-	78	90.361	Mola_mola
ENSSTOG00000010866	SRSF6	58	97.436	ENSMODG00000003107	SRSF6	95	90.798	Monodelphis_domestica
ENSSTOG00000010866	SRSF6	100	98.519	MGP_CAROLIEiJ_G0024606	Srsf6	100	98.519	Mus_caroli
ENSSTOG00000010866	SRSF6	100	98.519	ENSMUSG00000016921	Srsf6	100	98.519	Mus_musculus
ENSSTOG00000010866	SRSF6	100	98.519	MGP_PahariEiJ_G0026050	Srsf6	100	98.519	Mus_pahari
ENSSTOG00000010866	SRSF6	100	98.519	MGP_SPRETEiJ_G0025528	Srsf6	100	98.519	Mus_spretus
ENSSTOG00000010866	SRSF6	84	96.875	ENSMPUG00000017692	SRSF6	99	96.875	Mustela_putorius_furo
ENSSTOG00000010866	SRSF6	94	80.745	ENSMLUG00000016618	SRSF6	94	80.615	Myotis_lucifugus
ENSSTOG00000010866	SRSF6	100	100.000	ENSNGAG00000017560	Srsf6	100	100.000	Nannospalax_galili
ENSSTOG00000010866	SRSF6	56	89.474	ENSNBRG00000014709	-	58	83.696	Neolamprologus_brichardi
ENSSTOG00000010866	SRSF6	58	93.590	ENSNBRG00000001846	-	52	87.634	Neolamprologus_brichardi
ENSSTOG00000010866	SRSF6	100	100.000	ENSNLEG00000006524	SRSF6	100	100.000	Nomascus_leucogenys
ENSSTOG00000010866	SRSF6	58	97.436	ENSMEUG00000014615	SRSF6	99	92.459	Notamacropus_eugenii
ENSSTOG00000010866	SRSF6	75	96.899	ENSOPRG00000002017	-	100	96.899	Ochotona_princeps
ENSSTOG00000010866	SRSF6	100	100.000	ENSODEG00000016510	-	100	100.000	Octodon_degus
ENSSTOG00000010866	SRSF6	61	86.585	ENSONIG00000020247	-	53	84.239	Oreochromis_niloticus
ENSSTOG00000010866	SRSF6	84	79.739	ENSOCUG00000009785	-	98	83.108	Oryctolagus_cuniculus
ENSSTOG00000010866	SRSF6	74	58.268	ENSOCUG00000023999	-	70	63.687	Oryctolagus_cuniculus
ENSSTOG00000010866	SRSF6	58	94.872	ENSORLG00020017506	srsf6a	90	70.323	Oryzias_latipes_hni
ENSSTOG00000010866	SRSF6	98	68.613	ENSOGAG00000014468	SRSF6	94	96.308	Otolemur_garnettii
ENSSTOG00000010866	SRSF6	94	93.168	ENSOARG00000003117	SRSF6	94	92.923	Ovis_aries
ENSSTOG00000010866	SRSF6	100	98.547	ENSPPAG00000034327	-	100	98.547	Pan_paniscus
ENSSTOG00000010866	SRSF6	90	86.084	ENSPPAG00000043131	-	100	88.350	Pan_paniscus
ENSSTOG00000010866	SRSF6	100	96.232	ENSPPRG00000008917	SRSF6	100	96.232	Panthera_pardus
ENSSTOG00000010866	SRSF6	56	95.897	ENSPTIG00000019153	SRSF6	91	95.408	Panthera_tigris_altaica
ENSSTOG00000010866	SRSF6	90	86.084	ENSPTRG00000046274	-	100	88.350	Pan_troglodytes
ENSSTOG00000010866	SRSF6	100	100.000	ENSPTRG00000044686	-	100	100.000	Pan_troglodytes
ENSSTOG00000010866	SRSF6	100	100.000	ENSPANG00000035224	SRSF6	100	100.000	Papio_anubis
ENSSTOG00000010866	SRSF6	93	67.391	ENSPKIG00000018463	-	83	89.286	Paramormyrops_kingsleyae
ENSSTOG00000010866	SRSF6	59	77.500	ENSPKIG00000015703	-	95	61.745	Paramormyrops_kingsleyae
ENSSTOG00000010866	SRSF6	58	93.590	ENSPKIG00000015603	-	88	84.252	Paramormyrops_kingsleyae
ENSSTOG00000010866	SRSF6	89	71.429	ENSPMGG00000014963	srsf6a	55	89.130	Periophthalmus_magnuspinnatus
ENSSTOG00000010866	SRSF6	85	87.931	ENSPEMG00000022405	-	96	87.931	Peromyscus_maniculatus_bairdii
ENSSTOG00000010866	SRSF6	100	98.519	ENSPCIG00000003820	SRSF6	100	98.519	Phascolarctos_cinereus
ENSSTOG00000010866	SRSF6	58	92.308	ENSPFOG00000006437	srsf6a	50	83.158	Poecilia_formosa
ENSSTOG00000010866	SRSF6	58	92.308	ENSPLAG00000009243	srsf6a	80	82.677	Poecilia_latipinna
ENSSTOG00000010866	SRSF6	58	92.308	ENSPMEG00000006042	SRSF6	54	87.027	Poecilia_mexicana
ENSSTOG00000010866	SRSF6	59	91.139	ENSPREG00000001040	srsf6a	87	83.846	Poecilia_reticulata
ENSSTOG00000010866	SRSF6	100	98.837	ENSPPYG00000011019	SRSF6	100	98.837	Pongo_abelii
ENSSTOG00000010866	SRSF6	58	98.718	ENSPCAG00000010954	SRSF6	96	93.498	Procavia_capensis
ENSSTOG00000010866	SRSF6	100	100.000	ENSPCOG00000026364	SRSF6	100	100.000	Propithecus_coquereli
ENSSTOG00000010866	SRSF6	94	95.342	ENSPVAG00000015232	SRSF6	94	95.046	Pteropus_vampyrus
ENSSTOG00000010866	SRSF6	56	89.474	ENSPNYG00000004944	-	58	83.696	Pundamilia_nyererei
ENSSTOG00000010866	SRSF6	58	93.590	ENSPNYG00000011272	-	51	87.634	Pundamilia_nyererei
ENSSTOG00000010866	SRSF6	59	95.000	ENSPNAG00000023179	-	94	84.252	Pygocentrus_nattereri
ENSSTOG00000010866	SRSF6	100	96.491	ENSRNOG00000006380	Srsf6	100	96.491	Rattus_norvegicus
ENSSTOG00000010866	SRSF6	100	96.501	ENSRBIG00000041414	SRSF6	100	96.501	Rhinopithecus_bieti
ENSSTOG00000010866	SRSF6	100	100.000	ENSRROG00000029989	SRSF6	100	100.000	Rhinopithecus_roxellana
ENSSTOG00000010866	SRSF6	100	100.000	ENSSBOG00000033708	-	100	100.000	Saimiri_boliviensis_boliviensis
ENSSTOG00000010866	SRSF6	94	87.037	ENSSHAG00000012805	SRSF6	95	90.491	Sarcophilus_harrisii
ENSSTOG00000010866	SRSF6	55	93.243	ENSSFOG00015015169	SRSF6	60	89.130	Scleropages_formosus
ENSSTOG00000010866	SRSF6	56	94.737	ENSSFOG00015019681	-	72	64.179	Scleropages_formosus
ENSSTOG00000010866	SRSF6	56	88.158	ENSSMAG00000017447	-	55	79.891	Scophthalmus_maximus
ENSSTOG00000010866	SRSF6	59	92.500	ENSSMAG00000014861	-	95	67.969	Scophthalmus_maximus
ENSSTOG00000010866	SRSF6	63	87.059	ENSSDUG00000011036	-	90	87.059	Seriola_dumerili
ENSSTOG00000010866	SRSF6	98	61.151	ENSSDUG00000016097	srsf6a	53	87.634	Seriola_dumerili
ENSSTOG00000010866	SRSF6	63	87.059	ENSSLDG00000014858	-	90	87.059	Seriola_lalandi_dorsalis
ENSSTOG00000010866	SRSF6	98	61.871	ENSSLDG00000022841	srsf6a	54	87.634	Seriola_lalandi_dorsalis
ENSSTOG00000010866	SRSF6	69	94.538	ENSSARG00000001602	SRSF6	89	93.478	Sorex_araneus
ENSSTOG00000010866	SRSF6	100	97.037	ENSSPUG00000004967	SRSF6	100	97.037	Sphenodon_punctatus
ENSSTOG00000010866	SRSF6	63	84.706	ENSSPAG00000021913	-	86	84.706	Stegastes_partitus
ENSSTOG00000010866	SRSF6	98	61.871	ENSSPAG00000002362	srsf6a	67	86.243	Stegastes_partitus
ENSSTOG00000010866	SRSF6	94	96.296	ENSSSCG00000007362	SRSF6	96	96.886	Sus_scrofa
ENSSTOG00000010866	SRSF6	93	84.520	ENSTGUG00000003455	SRSF6	94	85.061	Taeniopygia_guttata
ENSSTOG00000010866	SRSF6	59	92.500	ENSTRUG00000021397	-	87	92.500	Takifugu_rubripes
ENSSTOG00000010866	SRSF6	87	71.096	ENSTNIG00000001692	srsf6a	57	86.022	Tetraodon_nigroviridis
ENSSTOG00000010866	SRSF6	85	94.138	ENSTBEG00000013448	SRSF6	93	94.138	Tupaia_belangeri
ENSSTOG00000010866	SRSF6	68	97.021	ENSTTRG00000015410	SRSF6	89	96.522	Tursiops_truncatus
ENSSTOG00000010866	SRSF6	100	99.259	ENSUAMG00000003559	SRSF6	100	99.259	Ursus_americanus
ENSSTOG00000010866	SRSF6	56	95.897	ENSUMAG00000001154	SRSF6	91	95.408	Ursus_maritimus
ENSSTOG00000010866	SRSF6	75	100.000	ENSVPAG00000003016	SRSF6	74	100.000	Vicugna_pacos
ENSSTOG00000010866	SRSF6	100	78.519	ENSVVUG00000019276	-	100	78.519	Vulpes_vulpes
ENSSTOG00000010866	SRSF6	58	92.308	ENSXMAG00000021849	srsf6a	55	86.413	Xiphophorus_maculatus