EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSTOG00000011016 (Gene tree)
Gene ID: 101959158
Gene Symbol: POP4
Alias: RPP29
Full Name: POP4 homolog%2C ribonuclease P/MRP subunit
Gene Type: protein_coding
Species: Ictidomys_tridecemlineatus
Status: putative
Strand: Minus strand
Length: 12415 bases
Position: chrJH393380.1:5702478-5714892
Accession: 101959158
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSTOP00000009880	UPF0086	PF01868.16	3.1e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSTOT00000011015	POP4-201	3718	XM_005330648	ENSSTOP00000009880	220 (aa)	XP_005330705	I3MGI4

Gene Model

Click here to download ENSSTOG00000011016's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSTOG00000011016's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSTOG00000011016	POP4	100	88.636	ENSG00000105171	POP4	100	92.708	Homo_sapiens
ENSSTOG00000011016	POP4	97	76.389	ENSAMEG00000003172	-	97	76.389	Ailuropoda_melanoleuca
ENSSTOG00000011016	POP4	99	87.615	ENSAMEG00000018329	-	99	87.615	Ailuropoda_melanoleuca
ENSSTOG00000011016	POP4	92	62.376	ENSACIG00000008358	pop4	96	61.386	Amphilophus_citrinellus
ENSSTOG00000011016	POP4	90	63.682	ENSAOCG00000010116	pop4	98	63.184	Amphiprion_ocellaris
ENSSTOG00000011016	POP4	94	62.019	ENSAPEG00000002829	pop4	87	61.538	Amphiprion_percula
ENSSTOG00000011016	POP4	94	60.577	ENSATEG00000013028	pop4	94	60.096	Anabas_testudineus
ENSSTOG00000011016	POP4	92	71.287	ENSAPLG00000014051	POP4	98	71.287	Anas_platyrhynchos
ENSSTOG00000011016	POP4	100	86.818	ENSANAG00000020295	POP4	100	86.818	Aotus_nancymaae
ENSSTOG00000011016	POP4	92	61.765	ENSACLG00000000526	pop4	91	60.891	Astatotilapia_calliptera
ENSSTOG00000011016	POP4	100	60.455	ENSAMXG00000002899	pop4	100	60.455	Astyanax_mexicanus
ENSSTOG00000011016	POP4	100	90.455	ENSBTAG00000002223	POP4	100	90.455	Bos_taurus
ENSSTOG00000011016	POP4	100	86.425	ENSCJAG00000046750	POP4	100	87.778	Callithrix_jacchus
ENSSTOG00000011016	POP4	83	91.758	ENSCAFG00000007630	POP4	100	91.758	Canis_familiaris
ENSSTOG00000011016	POP4	100	90.000	ENSCHIG00000016743	POP4	100	90.000	Capra_hircus
ENSSTOG00000011016	POP4	100	91.818	ENSTSYG00000003488	POP4	100	91.818	Carlito_syrichta
ENSSTOG00000011016	POP4	99	68.664	ENSCAPG00000011105	POP4	100	68.664	Cavia_aperea
ENSSTOG00000011016	POP4	100	90.455	ENSCPOG00000002992	POP4	100	90.455	Cavia_porcellus
ENSSTOG00000011016	POP4	100	74.545	ENSCCAG00000034244	-	100	74.545	Cebus_capucinus
ENSSTOG00000011016	POP4	100	88.182	ENSCCAG00000020285	-	100	88.182	Cebus_capucinus
ENSSTOG00000011016	POP4	100	90.000	ENSCATG00000036022	POP4	100	94.792	Cercocebus_atys
ENSSTOG00000011016	POP4	100	90.455	ENSCLAG00000013162	POP4	100	90.455	Chinchilla_lanigera
ENSSTOG00000011016	POP4	99	88.991	ENSCSAG00000004868	POP4	100	88.991	Chlorocebus_sabaeus
ENSSTOG00000011016	POP4	99	67.281	ENSCHOG00000002071	POP4	100	67.281	Choloepus_hoffmanni
ENSSTOG00000011016	POP4	100	71.818	ENSCPBG00000016132	POP4	100	71.818	Chrysemys_picta_bellii
ENSSTOG00000011016	POP4	87	33.503	ENSCING00000023871	-	97	31.980	Ciona_intestinalis
ENSSTOG00000011016	POP4	90	91.878	ENSCANG00000005924	POP4	98	91.878	Colobus_angolensis_palliatus
ENSSTOG00000011016	POP4	100	84.545	ENSCGRG00001017185	Pop4	100	84.091	Cricetulus_griseus_chok1gshd
ENSSTOG00000011016	POP4	100	84.545	ENSCGRG00000008155	Pop4	100	84.091	Cricetulus_griseus_crigri
ENSSTOG00000011016	POP4	94	55.502	ENSCSEG00000002946	pop4	94	54.808	Cynoglossus_semilaevis
ENSSTOG00000011016	POP4	92	44.390	ENSCVAG00000018602	POP4	89	42.365	Cyprinodon_variegatus
ENSSTOG00000011016	POP4	100	63.182	ENSDARG00000101472	pop4	100	63.182	Danio_rerio
ENSSTOG00000011016	POP4	100	88.636	ENSDNOG00000047663	POP4	88	88.636	Dasypus_novemcinctus
ENSSTOG00000011016	POP4	78	84.884	ENSDORG00000008577	Pop4	100	84.884	Dipodomys_ordii
ENSSTOG00000011016	POP4	85	34.500	FBgn0035831	CG8038	70	38.621	Drosophila_melanogaster
ENSSTOG00000011016	POP4	99	74.194	ENSETEG00000003607	POP4	100	74.194	Echinops_telfairi
ENSSTOG00000011016	POP4	100	43.439	ENSEBUG00000008575	pop4	100	43.439	Eptatretus_burgeri
ENSSTOG00000011016	POP4	100	42.489	ENSEBUG00000004305	pop4	100	42.060	Eptatretus_burgeri
ENSSTOG00000011016	POP4	90	47.393	ENSEBUG00000010447	pop4	82	46.919	Eptatretus_burgeri
ENSSTOG00000011016	POP4	100	89.714	ENSECAG00000020206	POP4	82	86.022	Equus_caballus
ENSSTOG00000011016	POP4	91	68.000	ENSEEUG00000013109	POP4	100	68.000	Erinaceus_europaeus
ENSSTOG00000011016	POP4	92	64.356	ENSELUG00000019812	pop4	92	62.871	Esox_lucius
ENSSTOG00000011016	POP4	100	90.000	ENSFCAG00000001619	POP4	100	90.000	Felis_catus
ENSSTOG00000011016	POP4	98	68.981	ENSFALG00000000206	POP4	96	68.981	Ficedula_albicollis
ENSSTOG00000011016	POP4	100	90.909	ENSFDAG00000017859	POP4	100	90.909	Fukomys_damarensis
ENSSTOG00000011016	POP4	92	55.825	ENSFHEG00000012745	pop4	93	55.340	Fundulus_heteroclitus
ENSSTOG00000011016	POP4	90	63.054	ENSGMOG00000000335	pop4	99	62.189	Gadus_morhua
ENSSTOG00000011016	POP4	100	67.727	ENSGALG00000041972	POP4	92	67.727	Gallus_gallus
ENSSTOG00000011016	POP4	78	51.724	ENSGAFG00000003571	pop4	96	51.724	Gambusia_affinis
ENSSTOG00000011016	POP4	99	59.091	ENSGACG00000014510	pop4	93	66.860	Gasterosteus_aculeatus
ENSSTOG00000011016	POP4	100	71.818	ENSGAGG00000024544	POP4	79	71.818	Gopherus_agassizii
ENSSTOG00000011016	POP4	99	88.532	ENSGGOG00000038346	POP4	99	88.532	Gorilla_gorilla
ENSSTOG00000011016	POP4	92	61.765	ENSHBUG00000021821	pop4	91	60.891	Haplochromis_burtoni
ENSSTOG00000011016	POP4	99	90.826	ENSHGLG00000015798	POP4	99	90.826	Heterocephalus_glaber_female
ENSSTOG00000011016	POP4	100	90.455	ENSHGLG00100009737	POP4	100	90.455	Heterocephalus_glaber_male
ENSSTOG00000011016	POP4	94	60.870	ENSHCOG00000020937	pop4	94	60.870	Hippocampus_comes
ENSSTOG00000011016	POP4	100	61.364	ENSIPUG00000013652	pop4	100	61.364	Ictalurus_punctatus
ENSSTOG00000011016	POP4	100	90.909	ENSJJAG00000013376	Pop4	100	90.909	Jaculus_jaculus
ENSSTOG00000011016	POP4	98	61.468	ENSKMAG00000012250	pop4	98	61.009	Kryptolebias_marmoratus
ENSSTOG00000011016	POP4	99	56.561	ENSLBEG00000014139	pop4	99	56.818	Labrus_bergylta
ENSSTOG00000011016	POP4	99	56.561	ENSLBEG00000018846	-	99	56.818	Labrus_bergylta
ENSSTOG00000011016	POP4	99	65.438	ENSLACG00000008581	POP4	98	65.438	Latimeria_chalumnae
ENSSTOG00000011016	POP4	100	69.091	ENSLOCG00000005597	pop4	100	69.091	Lepisosteus_oculatus
ENSSTOG00000011016	POP4	100	88.182	ENSLAFG00000000084	POP4	100	88.182	Loxodonta_africana
ENSSTOG00000011016	POP4	100	89.545	ENSMFAG00000029606	POP4	100	89.545	Macaca_fascicularis
ENSSTOG00000011016	POP4	100	88.235	ENSMMUG00000017424	POP4	100	86.878	Macaca_mulatta
ENSSTOG00000011016	POP4	100	88.235	ENSMNEG00000031374	POP4	100	86.878	Macaca_nemestrina
ENSSTOG00000011016	POP4	100	88.182	ENSMLEG00000043454	POP4	100	88.182	Mandrillus_leucophaeus
ENSSTOG00000011016	POP4	85	65.957	ENSMAMG00000011716	pop4	93	62.500	Mastacembelus_armatus
ENSSTOG00000011016	POP4	92	61.765	ENSMZEG00005002360	pop4	91	60.891	Maylandia_zebra
ENSSTOG00000011016	POP4	99	67.890	ENSMGAG00000005337	POP4	97	67.890	Meleagris_gallopavo
ENSSTOG00000011016	POP4	100	85.909	ENSMAUG00000020110	Pop4	100	85.909	Mesocricetus_auratus
ENSSTOG00000011016	POP4	99	85.321	ENSMICG00000035730	POP4	98	85.321	Microcebus_murinus
ENSSTOG00000011016	POP4	92	63.054	ENSMMOG00000015321	pop4	91	63.366	Mola_mola
ENSSTOG00000011016	POP4	98	79.167	ENSMODG00000029406	POP4	94	79.167	Monodelphis_domestica
ENSSTOG00000011016	POP4	100	61.538	ENSMALG00000012571	pop4	100	61.538	Monopterus_albus
ENSSTOG00000011016	POP4	100	84.615	MGP_CAROLIEiJ_G0029600	Pop4	100	85.520	Mus_caroli
ENSSTOG00000011016	POP4	100	85.068	ENSMUSG00000030423	Pop4	100	84.615	Mus_musculus
ENSSTOG00000011016	POP4	100	85.000	MGP_SPRETEiJ_G0030699	Pop4	100	84.091	Mus_spretus
ENSSTOG00000011016	POP4	100	89.091	ENSMPUG00000008041	-	100	89.091	Mustela_putorius_furo
ENSSTOG00000011016	POP4	100	75.113	ENSMPUG00000008063	-	100	75.113	Mustela_putorius_furo
ENSSTOG00000011016	POP4	99	68.493	ENSMLUG00000010774	POP4	99	68.493	Myotis_lucifugus
ENSSTOG00000011016	POP4	57	82.400	ENSMEUG00000003636	-	100	82.400	Notamacropus_eugenii
ENSSTOG00000011016	POP4	91	91.000	ENSOPRG00000004736	POP4	100	91.000	Ochotona_princeps
ENSSTOG00000011016	POP4	99	89.862	ENSODEG00000013025	POP4	100	90.566	Octodon_degus
ENSSTOG00000011016	POP4	92	60.099	ENSONIG00000003458	pop4	90	60.396	Oreochromis_niloticus
ENSSTOG00000011016	POP4	100	90.000	ENSOCUG00000015974	POP4	100	90.000	Oryctolagus_cuniculus
ENSSTOG00000011016	POP4	90	60.697	ENSORLG00000020317	pop4	91	60.199	Oryzias_latipes
ENSSTOG00000011016	POP4	100	57.399	ENSORLG00015011624	pop4	100	56.951	Oryzias_latipes_hsok
ENSSTOG00000011016	POP4	94	61.058	ENSOMEG00000002538	pop4	93	60.577	Oryzias_melastigma
ENSSTOG00000011016	POP4	99	87.156	ENSOGAG00000011168	POP4	99	87.156	Otolemur_garnettii
ENSSTOG00000011016	POP4	100	89.593	ENSOARG00000004041	POP4	100	89.593	Ovis_aries
ENSSTOG00000011016	POP4	100	89.091	ENSPPAG00000040372	POP4	100	89.091	Pan_paniscus
ENSSTOG00000011016	POP4	100	90.000	ENSPPRG00000010502	POP4	100	90.000	Panthera_pardus
ENSSTOG00000011016	POP4	100	90.000	ENSPTIG00000016598	POP4	100	90.000	Panthera_tigris_altaica
ENSSTOG00000011016	POP4	100	89.091	ENSPTRG00000010779	POP4	100	89.091	Pan_troglodytes
ENSSTOG00000011016	POP4	100	89.545	ENSPANG00000008546	POP4	100	89.545	Papio_anubis
ENSSTOG00000011016	POP4	90	69.652	ENSPKIG00000004468	pop4	88	69.154	Paramormyrops_kingsleyae
ENSSTOG00000011016	POP4	100	72.273	ENSPSIG00000015690	POP4	100	75.248	Pelodiscus_sinensis
ENSSTOG00000011016	POP4	90	59.314	ENSPMGG00000008608	pop4	98	58.824	Periophthalmus_magnuspinnatus
ENSSTOG00000011016	POP4	99	69.725	ENSPEMG00000019982	-	100	69.725	Peromyscus_maniculatus_bairdii
ENSSTOG00000011016	POP4	100	84.091	ENSPEMG00000014034	-	96	84.091	Peromyscus_maniculatus_bairdii
ENSSTOG00000011016	POP4	83	57.576	ENSPMAG00000006265	pop4	100	55.051	Petromyzon_marinus
ENSSTOG00000011016	POP4	100	79.545	ENSPCIG00000024738	POP4	95	79.545	Phascolarctos_cinereus
ENSSTOG00000011016	POP4	98	56.221	ENSPFOG00000000925	pop4	98	56.221	Poecilia_formosa
ENSSTOG00000011016	POP4	98	56.221	ENSPLAG00000003161	pop4	98	56.221	Poecilia_latipinna
ENSSTOG00000011016	POP4	98	56.221	ENSPMEG00000002475	pop4	98	56.221	Poecilia_mexicana
ENSSTOG00000011016	POP4	92	58.621	ENSPREG00000022403	pop4	88	58.621	Poecilia_reticulata
ENSSTOG00000011016	POP4	100	89.545	ENSPPYG00000009805	POP4	100	89.545	Pongo_abelii
ENSSTOG00000011016	POP4	99	80.365	ENSPCAG00000007737	POP4	99	80.365	Procavia_capensis
ENSSTOG00000011016	POP4	100	90.455	ENSPCOG00000018055	POP4	100	90.455	Propithecus_coquereli
ENSSTOG00000011016	POP4	100	86.364	ENSPVAG00000006069	POP4	100	86.364	Pteropus_vampyrus
ENSSTOG00000011016	POP4	92	62.255	ENSPNYG00000020038	pop4	91	61.386	Pundamilia_nyererei
ENSSTOG00000011016	POP4	100	61.818	ENSPNAG00000005591	pop4	100	61.818	Pygocentrus_nattereri
ENSSTOG00000011016	POP4	100	85.068	ENSRNOG00000027646	Pop4	100	85.973	Rattus_norvegicus
ENSSTOG00000011016	POP4	80	86.286	ENSRBIG00000044769	POP4	89	92.029	Rhinopithecus_bieti
ENSSTOG00000011016	POP4	100	89.091	ENSRROG00000028903	POP4	100	89.091	Rhinopithecus_roxellana
ENSSTOG00000011016	POP4	57	35.252	YBR257W	-	50	35.252	Saccharomyces_cerevisiae
ENSSTOG00000011016	POP4	100	87.727	ENSSBOG00000032445	POP4	100	87.727	Saimiri_boliviensis_boliviensis
ENSSTOG00000011016	POP4	99	79.817	ENSSHAG00000016888	POP4	99	79.817	Sarcophilus_harrisii
ENSSTOG00000011016	POP4	92	68.812	ENSSFOG00015014556	pop4	90	68.317	Scleropages_formosus
ENSSTOG00000011016	POP4	93	63.033	ENSSMAG00000016611	pop4	99	62.559	Scophthalmus_maximus
ENSSTOG00000011016	POP4	94	62.679	ENSSDUG00000019865	pop4	84	62.500	Seriola_dumerili
ENSSTOG00000011016	POP4	94	62.500	ENSSLDG00000001763	pop4	93	62.019	Seriola_lalandi_dorsalis
ENSSTOG00000011016	POP4	99	89.401	ENSSARG00000004748	POP4	100	89.401	Sorex_araneus
ENSSTOG00000011016	POP4	94	63.942	ENSSPAG00000014364	pop4	93	63.462	Stegastes_partitus
ENSSTOG00000011016	POP4	100	91.364	ENSSSCG00000002854	POP4	100	91.364	Sus_scrofa
ENSSTOG00000011016	POP4	90	71.859	ENSTGUG00000008953	POP4	99	71.859	Taeniopygia_guttata
ENSSTOG00000011016	POP4	92	63.415	ENSTNIG00000006401	pop4	100	62.562	Tetraodon_nigroviridis
ENSSTOG00000011016	POP4	100	89.593	ENSTBEG00000002194	POP4	100	90.950	Tupaia_belangeri
ENSSTOG00000011016	POP4	100	87.273	ENSTTRG00000005882	POP4	100	87.273	Tursiops_truncatus
ENSSTOG00000011016	POP4	100	88.636	ENSUAMG00000003049	-	100	88.636	Ursus_americanus
ENSSTOG00000011016	POP4	100	88.636	ENSUMAG00000007522	-	100	88.636	Ursus_maritimus
ENSSTOG00000011016	POP4	92	90.594	ENSVVUG00000016876	-	71	90.594	Vulpes_vulpes
ENSSTOG00000011016	POP4	98	67.130	ENSXETG00000017598	pop4	98	67.130	Xenopus_tropicalis
ENSSTOG00000011016	POP4	87	62.564	ENSXCOG00000017695	pop4	83	60.825	Xiphophorus_couchianus
ENSSTOG00000011016	POP4	87	62.564	ENSXMAG00000013862	pop4	83	60.825	Xiphophorus_maculatus