EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSTOG00000011185 (Gene tree)
Gene ID: 101955191
Gene Symbol: LRPPRC
Alias: -
Full Name: leucine rich pentatricopeptide repeat containing
Gene Type: protein_coding
Species: Ictidomys_tridecemlineatus
Status: putative
Strand: Plus strand
Length: 107233 bases
Position: chrJH393318.1:7961042-8068274
Accession: 101955191
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSTOP00000010042	PPR	PF01535.20	7.5e-27	1	4
ENSSTOP00000010042	PPR	PF01535.20	7.5e-27	2	4
ENSSTOP00000010042	PPR	PF01535.20	7.5e-27	3	4
ENSSTOP00000010042	PPR	PF01535.20	7.5e-27	4	4
ENSSTOP00000029316	PPR	PF01535.20	1.1e-26	1	3
ENSSTOP00000029316	PPR	PF01535.20	1.1e-26	2	3
ENSSTOP00000029316	PPR	PF01535.20	1.1e-26	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSTOT00000042408	LRPPRC-201	5899	-	ENSSTOP00000029316	1433 (aa)	-	A0A287D728
ENSSTOT00000011197	LRPPRC-202	5779	XM_005324518	ENSSTOP00000010042	1393 (aa)	XP_005324575	I3MGV5

Gene Model

Click here to download ENSSTOG00000011185's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSTOG00000011185's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSTOG00000011185	LRPPRC	99	50.734	ENSAPOG00000016610	lrpprc	99	50.629	Acanthochromis_polyacanthus
ENSSTOG00000011185	LRPPRC	98	83.578	ENSAMEG00000005852	LRPPRC	99	83.778	Ailuropoda_melanoleuca
ENSSTOG00000011185	LRPPRC	99	49.117	ENSACIG00000009604	lrpprc	99	48.939	Amphilophus_citrinellus
ENSSTOG00000011185	LRPPRC	99	50.942	ENSAOCG00000005886	lrpprc	99	50.803	Amphiprion_ocellaris
ENSSTOG00000011185	LRPPRC	99	48.736	ENSAPEG00000002937	lrpprc	98	48.419	Amphiprion_percula
ENSSTOG00000011185	LRPPRC	91	56.426	ENSATEG00000010555	lrpprc	95	58.478	Anabas_testudineus
ENSSTOG00000011185	LRPPRC	96	62.435	ENSACAG00000029278	LRPPRC	99	61.226	Anolis_carolinensis
ENSSTOG00000011185	LRPPRC	100	81.487	ENSANAG00000027440	LRPPRC	100	81.558	Aotus_nancymaae
ENSSTOG00000011185	LRPPRC	96	50.667	ENSACLG00000023712	lrpprc	92	57.569	Astatotilapia_calliptera
ENSSTOG00000011185	LRPPRC	100	80.915	ENSCJAG00000000794	LRPPRC	100	81.058	Callithrix_jacchus
ENSSTOG00000011185	LRPPRC	99	85.151	ENSCHIG00000020173	LRPPRC	99	85.151	Capra_hircus
ENSSTOG00000011185	LRPPRC	92	75.781	ENSCAPG00000013631	LRPPRC	100	75.781	Cavia_aperea
ENSSTOG00000011185	LRPPRC	87	83.264	ENSCPOG00000000204	LRPPRC	100	83.264	Cavia_porcellus
ENSSTOG00000011185	LRPPRC	100	80.587	ENSCCAG00000031900	LRPPRC	100	80.587	Cebus_capucinus
ENSSTOG00000011185	LRPPRC	100	80.843	ENSCATG00000014187	LRPPRC	99	82.197	Cercocebus_atys
ENSSTOG00000011185	LRPPRC	99	80.687	ENSCLAG00000005203	LRPPRC	99	80.544	Chinchilla_lanigera
ENSSTOG00000011185	LRPPRC	100	81.773	ENSCSAG00000013233	LRPPRC	100	82.130	Chlorocebus_sabaeus
ENSSTOG00000011185	LRPPRC	85	79.818	ENSCHOG00000003631	LRPPRC	84	80.333	Choloepus_hoffmanni
ENSSTOG00000011185	LRPPRC	100	77.794	ENSCANG00000034961	LRPPRC	100	87.330	Colobus_angolensis_palliatus
ENSSTOG00000011185	LRPPRC	100	79.498	ENSCGRG00001016261	Lrpprc	100	79.713	Cricetulus_griseus_chok1gshd
ENSSTOG00000011185	LRPPRC	100	79.498	ENSCGRG00000004072	Lrpprc	100	79.713	Cricetulus_griseus_crigri
ENSSTOG00000011185	LRPPRC	99	41.929	ENSCSEG00000003850	lrpprc	96	49.304	Cynoglossus_semilaevis
ENSSTOG00000011185	LRPPRC	100	50.350	ENSCVAG00000012967	lrpprc	95	51.468	Cyprinodon_variegatus
ENSSTOG00000011185	LRPPRC	99	49.196	ENSDARG00000043970	lrpprc	98	49.126	Danio_rerio
ENSSTOG00000011185	LRPPRC	100	81.031	ENSDNOG00000012594	-	100	80.959	Dasypus_novemcinctus
ENSSTOG00000011185	LRPPRC	82	60.384	ENSDNOG00000032336	-	100	60.175	Dasypus_novemcinctus
ENSSTOG00000011185	LRPPRC	100	85.520	ENSDORG00000012233	Lrpprc	100	85.735	Dipodomys_ordii
ENSSTOG00000011185	LRPPRC	99	79.986	ENSETEG00000006657	LRPPRC	99	80.129	Echinops_telfairi
ENSSTOG00000011185	LRPPRC	87	68.675	ENSEEUG00000012340	LRPPRC	93	68.675	Erinaceus_europaeus
ENSSTOG00000011185	LRPPRC	96	50.667	ENSELUG00000012803	lrpprc	98	50.820	Esox_lucius
ENSSTOG00000011185	LRPPRC	99	86.093	ENSFCAG00000013468	LRPPRC	99	86.452	Felis_catus
ENSSTOG00000011185	LRPPRC	96	56.612	ENSFALG00000012738	LRPPRC	99	56.612	Ficedula_albicollis
ENSSTOG00000011185	LRPPRC	100	79.015	ENSFDAG00000015328	LRPPRC	100	78.872	Fukomys_damarensis
ENSSTOG00000011185	LRPPRC	99	49.612	ENSFHEG00000019604	lrpprc	94	50.778	Fundulus_heteroclitus
ENSSTOG00000011185	LRPPRC	99	48.749	ENSGMOG00000008337	lrpprc	99	48.926	Gadus_morhua
ENSSTOG00000011185	LRPPRC	99	50.564	ENSGAFG00000001455	lrpprc	99	50.106	Gambusia_affinis
ENSSTOG00000011185	LRPPRC	99	50.107	ENSGACG00000010679	lrpprc	99	50.924	Gasterosteus_aculeatus
ENSSTOG00000011185	LRPPRC	99	51.053	ENSHBUG00000000393	lrpprc	97	50.983	Haplochromis_burtoni
ENSSTOG00000011185	LRPPRC	100	81.954	ENSHGLG00000006123	LRPPRC	100	81.954	Heterocephalus_glaber_female
ENSSTOG00000011185	LRPPRC	60	83.473	ENSHGLG00100005960	-	100	83.473	Heterocephalus_glaber_male
ENSSTOG00000011185	LRPPRC	95	50.521	ENSHCOG00000002107	lrpprc	96	50.521	Hippocampus_comes
ENSSTOG00000011185	LRPPRC	99	51.116	ENSIPUG00000009406	lrpprc	98	50.907	Ictalurus_punctatus
ENSSTOG00000011185	LRPPRC	100	83.154	ENSJJAG00000020475	Lrpprc	100	83.154	Jaculus_jaculus
ENSSTOG00000011185	LRPPRC	97	47.553	ENSKMAG00000003287	lrpprc	82	47.553	Kryptolebias_marmoratus
ENSSTOG00000011185	LRPPRC	99	46.283	ENSLBEG00000023225	lrpprc	96	56.175	Labrus_bergylta
ENSSTOG00000011185	LRPPRC	100	60.809	ENSLACG00000014030	LRPPRC	99	60.809	Latimeria_chalumnae
ENSSTOG00000011185	LRPPRC	99	57.994	ENSLOCG00000016390	lrpprc	93	59.473	Lepisosteus_oculatus
ENSSTOG00000011185	LRPPRC	99	76.538	ENSLAFG00000008614	LRPPRC	99	76.538	Loxodonta_africana
ENSSTOG00000011185	LRPPRC	100	81.272	ENSMFAG00000041560	LRPPRC	99	82.576	Macaca_fascicularis
ENSSTOG00000011185	LRPPRC	99	79.528	ENSMMUG00000019841	LRPPRC	100	82.227	Macaca_mulatta
ENSSTOG00000011185	LRPPRC	100	81.201	ENSMNEG00000031613	LRPPRC	99	82.765	Macaca_nemestrina
ENSSTOG00000011185	LRPPRC	98	48.491	ENSMAMG00000021835	lrpprc	98	48.575	Mastacembelus_armatus
ENSSTOG00000011185	LRPPRC	99	51.404	ENSMZEG00005027379	lrpprc	99	51.264	Maylandia_zebra
ENSSTOG00000011185	LRPPRC	100	80.072	ENSMAUG00000012118	Lrpprc	100	80.287	Mesocricetus_auratus
ENSSTOG00000011185	LRPPRC	99	85.642	ENSMICG00000010486	LRPPRC	99	85.499	Microcebus_murinus
ENSSTOG00000011185	LRPPRC	100	83.011	ENSMOCG00000006048	Lrpprc	100	83.011	Microtus_ochrogaster
ENSSTOG00000011185	LRPPRC	99	49.754	ENSMMOG00000007830	lrpprc	99	53.933	Mola_mola
ENSSTOG00000011185	LRPPRC	96	69.764	ENSMODG00000000648	LRPPRC	99	69.764	Monodelphis_domestica
ENSSTOG00000011185	LRPPRC	99	49.365	ENSMALG00000001271	lrpprc	99	49.119	Monopterus_albus
ENSSTOG00000011185	LRPPRC	99	82.820	ENSMPUG00000011800	LRPPRC	99	85.810	Mustela_putorius_furo
ENSSTOG00000011185	LRPPRC	99	84.086	ENSMLUG00000010575	LRPPRC	99	84.444	Myotis_lucifugus
ENSSTOG00000011185	LRPPRC	100	83.441	ENSNGAG00000013069	Lrpprc	100	83.441	Nannospalax_galili
ENSSTOG00000011185	LRPPRC	94	49.584	ENSNBRG00000013202	lrpprc	98	55.357	Neolamprologus_brichardi
ENSSTOG00000011185	LRPPRC	100	80.301	ENSNLEG00000016782	LRPPRC	99	82.386	Nomascus_leucogenys
ENSSTOG00000011185	LRPPRC	93	77.759	ENSOPRG00000016774	LRPPRC	93	77.759	Ochotona_princeps
ENSSTOG00000011185	LRPPRC	100	83.082	ENSODEG00000011211	LRPPRC	100	83.297	Octodon_degus
ENSSTOG00000011185	LRPPRC	99	51.348	ENSONIG00000000917	lrpprc	99	51.459	Oreochromis_niloticus
ENSSTOG00000011185	LRPPRC	54	63.007	ENSOANG00000014670	-	99	63.529	Ornithorhynchus_anatinus
ENSSTOG00000011185	LRPPRC	99	85.868	ENSOCUG00000015046	LRPPRC	96	85.868	Oryctolagus_cuniculus
ENSSTOG00000011185	LRPPRC	99	47.350	ENSORLG00000004605	lrpprc	99	47.350	Oryzias_latipes
ENSSTOG00000011185	LRPPRC	92	51.895	ENSORLG00020012536	lrpprc	99	51.192	Oryzias_latipes_hni
ENSSTOG00000011185	LRPPRC	94	54.728	ENSORLG00015018270	lrpprc	95	57.883	Oryzias_latipes_hsok
ENSSTOG00000011185	LRPPRC	100	80.901	ENSOGAG00000012798	LRPPRC	100	81.330	Otolemur_garnettii
ENSSTOG00000011185	LRPPRC	99	85.458	ENSOARG00000006522	LRPPRC	99	85.458	Ovis_aries
ENSSTOG00000011185	LRPPRC	100	77.659	ENSPPAG00000040876	LRPPRC	99	79.017	Pan_paniscus
ENSSTOG00000011185	LRPPRC	99	86.237	ENSPPRG00000006578	LRPPRC	99	86.237	Panthera_pardus
ENSSTOG00000011185	LRPPRC	97	86.770	ENSPTIG00000000933	LRPPRC	97	86.770	Panthera_tigris_altaica
ENSSTOG00000011185	LRPPRC	100	80.301	ENSPTRG00000011880	LRPPRC	100	80.659	Pan_troglodytes
ENSSTOG00000011185	LRPPRC	100	80.986	ENSPANG00000020731	LRPPRC	99	82.576	Papio_anubis
ENSSTOG00000011185	LRPPRC	90	58.166	ENSPKIG00000022232	lrpprc	97	58.166	Paramormyrops_kingsleyae
ENSSTOG00000011185	LRPPRC	61	65.461	ENSPSIG00000006830	-	98	65.349	Pelodiscus_sinensis
ENSSTOG00000011185	LRPPRC	67	45.106	ENSPMGG00000016597	lrpprc	96	45.106	Periophthalmus_magnuspinnatus
ENSSTOG00000011185	LRPPRC	94	45.358	ENSPMAG00000002147	lrpprc	99	45.358	Petromyzon_marinus
ENSSTOG00000011185	LRPPRC	99	50.000	ENSPFOG00000011227	lrpprc	99	50.213	Poecilia_formosa
ENSSTOG00000011185	LRPPRC	99	49.788	ENSPLAG00000004018	lrpprc	95	50.890	Poecilia_latipinna
ENSSTOG00000011185	LRPPRC	99	50.141	ENSPMEG00000016425	lrpprc	95	51.261	Poecilia_mexicana
ENSSTOG00000011185	LRPPRC	99	50.107	ENSPREG00000003662	lrpprc	99	49.683	Poecilia_reticulata
ENSSTOG00000011185	LRPPRC	58	79.975	ENSPPYG00000029532	-	100	79.975	Pongo_abelii
ENSSTOG00000011185	LRPPRC	83	76.857	ENSPCAG00000001430	LRPPRC	84	77.375	Procavia_capensis
ENSSTOG00000011185	LRPPRC	99	82.581	ENSPVAG00000002007	LRPPRC	99	82.796	Pteropus_vampyrus
ENSSTOG00000011185	LRPPRC	99	48.868	ENSPNYG00000000756	lrpprc	99	48.831	Pundamilia_nyererei
ENSSTOG00000011185	LRPPRC	100	53.626	ENSPNAG00000002895	lrpprc	96	54.898	Pygocentrus_nattereri
ENSSTOG00000011185	LRPPRC	100	81.219	ENSRNOG00000005877	Lrpprc	100	81.147	Rattus_norvegicus
ENSSTOG00000011185	LRPPRC	100	79.149	ENSRBIG00000031552	LRPPRC	100	79.504	Rhinopithecus_bieti
ENSSTOG00000011185	LRPPRC	100	80.802	ENSSBOG00000011807	LRPPRC	100	80.802	Saimiri_boliviensis_boliviensis
ENSSTOG00000011185	LRPPRC	96	67.013	ENSSHAG00000018725	LRPPRC	99	67.013	Sarcophilus_harrisii
ENSSTOG00000011185	LRPPRC	99	51.385	ENSSFOG00015001042	lrpprc	99	51.253	Scleropages_formosus
ENSSTOG00000011185	LRPPRC	99	51.651	ENSSDUG00000019062	lrpprc	99	51.477	Seriola_dumerili
ENSSTOG00000011185	LRPPRC	99	44.864	ENSSLDG00000023028	lrpprc	99	44.882	Seriola_lalandi_dorsalis
ENSSTOG00000011185	LRPPRC	87	70.864	ENSSARG00000000426	LRPPRC	100	70.864	Sorex_araneus
ENSSTOG00000011185	LRPPRC	99	46.860	ENSSPAG00000000162	lrpprc	99	46.717	Stegastes_partitus
ENSSTOG00000011185	LRPPRC	99	84.946	ENSSSCG00000008452	LRPPRC	99	84.946	Sus_scrofa
ENSSTOG00000011185	LRPPRC	94	56.051	ENSTGUG00000003759	LRPPRC	100	55.867	Taeniopygia_guttata
ENSSTOG00000011185	LRPPRC	91	51.613	ENSTRUG00000008409	lrpprc	91	52.760	Takifugu_rubripes
ENSSTOG00000011185	LRPPRC	99	50.212	ENSTNIG00000007470	lrpprc	99	51.252	Tetraodon_nigroviridis
ENSSTOG00000011185	LRPPRC	99	82.366	ENSTTRG00000006403	LRPPRC	99	82.366	Tursiops_truncatus
ENSSTOG00000011185	LRPPRC	96	79.480	ENSVPAG00000008993	LRPPRC	99	79.480	Vicugna_pacos
ENSSTOG00000011185	LRPPRC	99	60.328	ENSXETG00000009296	lrpprc	99	60.185	Xenopus_tropicalis
ENSSTOG00000011185	LRPPRC	99	46.507	ENSXCOG00000013343	lrpprc	95	53.000	Xiphophorus_couchianus
ENSSTOG00000011185	LRPPRC	99	49.825	ENSXMAG00000018108	lrpprc	95	50.803	Xiphophorus_maculatus