EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSTOG00000011222 (Gene tree)
Gene ID: 101978407
Gene Symbol: -
Alias: -
Full Name: RAB13%2C member RAS oncogene family
Gene Type: protein_coding
Species: Ictidomys_tridecemlineatus
Status: putative
Strand: Minus strand
Length: 4276 bases
Position: chrJH393390.1:3728892-3733167
Accession: 101978407
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSTOP00000010065	MMR_HSR1	PF01926.23	5.1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSTOT00000011222	-	1258	XM_005331278	ENSSTOP00000010065	203 (aa)	XP_005331335	I3MGW9

Gene Model

Click here to download ENSSTOG00000011222's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSTOG00000011222's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSTOG00000011222	-	89	42.781	ENSSTOG00000025248	RAB14	87	42.781
ENSSTOG00000011222	-	78	41.772	ENSSTOG00000014123	RAB6B	76	41.772
ENSSTOG00000011222	-	79	38.037	ENSSTOG00000012534	MRAS	78	38.037
ENSSTOG00000011222	-	84	52.326	ENSSTOG00000025122	RAB12	76	52.326
ENSSTOG00000011222	-	79	38.272	ENSSTOG00000023151	NRAS	85	38.272
ENSSTOG00000011222	-	83	35.632	ENSSTOG00000023505	RERG	84	35.632
ENSSTOG00000011222	-	89	46.409	ENSSTOG00000020966	RAB30	89	46.409
ENSSTOG00000011222	-	93	36.098	ENSSTOG00000000084	-	93	36.098
ENSSTOG00000011222	-	80	40.000	ENSSTOG00000024550	RAB9A	83	40.000
ENSSTOG00000011222	-	84	54.706	ENSSTOG00000000861	RAB15	80	54.706
ENSSTOG00000011222	-	58	33.333	ENSSTOG00000003371	ARL14	59	33.333
ENSSTOG00000011222	-	67	30.882	ENSSTOG00000002104	ARF5	72	30.882
ENSSTOG00000011222	-	97	41.429	ENSSTOG00000031571	RAB11B	95	41.429
ENSSTOG00000011222	-	81	38.182	ENSSTOG00000010962	RAB23	69	38.182
ENSSTOG00000011222	-	79	39.506	ENSSTOG00000021206	HRAS	91	36.667
ENSSTOG00000011222	-	83	58.580	ENSSTOG00000020693	-	84	57.988
ENSSTOG00000011222	-	91	54.348	ENSSTOG00000011052	RAB1B	92	54.348
ENSSTOG00000011222	-	66	30.370	ENSSTOG00000019470	-	72	30.370
ENSSTOG00000011222	-	59	30.833	ENSSTOG00000025524	ARL2	63	30.833
ENSSTOG00000011222	-	78	43.038	ENSSTOG00000023497	RAB6A	76	43.038
ENSSTOG00000011222	-	95	39.583	ENSSTOG00000026229	RAB5A	89	39.583
ENSSTOG00000011222	-	83	41.954	ENSSTOG00000027511	RAB33B	76	41.954
ENSSTOG00000011222	-	87	43.316	ENSSTOG00000008386	RAB33A	79	43.316
ENSSTOG00000011222	-	80	41.667	ENSSTOG00000004081	RAB9B	83	41.667
ENSSTOG00000011222	-	85	42.197	ENSSTOG00000000634	RAB25	81	42.197
ENSSTOG00000011222	-	86	47.191	ENSSTOG00000011237	RAB39B	84	47.191
ENSSTOG00000011222	-	95	39.378	ENSSTOG00000010536	RAB5B	89	39.378
ENSSTOG00000011222	-	78	40.123	ENSSTOG00000008444	RAB36	61	40.123
ENSSTOG00000011222	-	92	41.500	ENSSTOG00000015255	RAB11A	93	41.500
ENSSTOG00000011222	-	95	37.500	ENSSTOG00000006620	RAB5C	89	37.500
ENSSTOG00000011222	-	86	43.182	ENSSTOG00000014560	-	85	43.182
ENSSTOG00000011222	-	83	48.214	ENSSTOG00000001886	RAB2B	81	49.045
ENSSTOG00000011222	-	88	36.264	ENSSTOG00000028487	RAB7A	88	36.264
ENSSTOG00000011222	-	83	30.286	ENSSTOG00000006080	DNAJC27	64	30.286
ENSSTOG00000011222	-	95	38.350	ENSSTOG00000025062	RAB34	80	38.350
ENSSTOG00000011222	-	63	30.496	ENSSTOG00000011978	ARFRP1	68	30.496
ENSSTOG00000011222	-	62	30.952	ENSSTOG00000014453	ARL3	66	30.952
ENSSTOG00000011222	-	72	30.000	ENSSTOG00000025407	-	82	30.000
ENSSTOG00000011222	-	79	32.099	ENSSTOG00000028430	ERAS	70	32.099
ENSSTOG00000011222	-	81	32.121	ENSSTOG00000004544	RHEB	87	32.121
ENSSTOG00000011222	-	79	40.123	ENSSTOG00000009530	KRAS	97	37.824

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSTOG00000011222	-	100	97.044	ENSG00000143545	RAB13	100	97.044	Homo_sapiens
ENSSTOG00000011222	-	99	75.124	ENSACIG00000008584	rab13	97	75.124	Amphilophus_citrinellus
ENSSTOG00000011222	-	100	96.552	ENSANAG00000030247	-	100	96.552	Aotus_nancymaae
ENSSTOG00000011222	-	99	79.703	ENSAMXG00000030712	rab13	99	79.703	Astyanax_mexicanus
ENSSTOG00000011222	-	100	96.552	ENSBTAG00000017604	RAB13	100	96.552	Bos_taurus
ENSSTOG00000011222	-	80	47.239	WBGene00019317	K02E10.1	75	47.239	Caenorhabditis_elegans
ENSSTOG00000011222	-	100	96.059	ENSCJAG00000009933	-	100	96.059	Callithrix_jacchus
ENSSTOG00000011222	-	100	96.059	ENSCHIG00000022271	-	100	96.059	Capra_hircus
ENSSTOG00000011222	-	99	91.584	ENSCPOG00000011491	-	99	91.584	Cavia_porcellus
ENSSTOG00000011222	-	100	96.552	ENSCCAG00000028502	-	100	96.552	Cebus_capucinus
ENSSTOG00000011222	-	100	97.044	ENSCATG00000041779	-	100	97.044	Cercocebus_atys
ENSSTOG00000011222	-	100	91.133	ENSCLAG00000006603	-	100	91.133	Chinchilla_lanigera
ENSSTOG00000011222	-	100	97.044	ENSCANG00000036573	-	100	97.044	Colobus_angolensis_palliatus
ENSSTOG00000011222	-	100	95.074	ENSCGRG00001021505	Rab13	100	95.074	Cricetulus_griseus_chok1gshd
ENSSTOG00000011222	-	100	95.074	ENSCGRG00000012126	Rab13	100	95.074	Cricetulus_griseus_crigri
ENSSTOG00000011222	-	99	77.451	ENSCSEG00000002358	rab13	99	77.451	Cynoglossus_semilaevis
ENSSTOG00000011222	-	99	79.512	ENSDARG00000034771	rab13	99	79.512	Danio_rerio
ENSSTOG00000011222	-	100	94.089	ENSDORG00000001591	Rab13	100	94.089	Dipodomys_ordii
ENSSTOG00000011222	-	100	96.059	ENSEASG00005000683	-	100	96.059	Equus_asinus_asinus
ENSSTOG00000011222	-	100	96.059	ENSECAG00000016551	RAB13	100	96.059	Equus_caballus
ENSSTOG00000011222	-	99	89.604	ENSEEUG00000001233	-	99	89.604	Erinaceus_europaeus
ENSSTOG00000011222	-	99	77.073	ENSELUG00000012801	rab13	99	77.073	Esox_lucius
ENSSTOG00000011222	-	100	91.626	ENSFCAG00000045269	-	100	91.626	Felis_catus
ENSSTOG00000011222	-	65	96.970	ENSFDAG00000014469	-	100	96.970	Fukomys_damarensis
ENSSTOG00000011222	-	99	76.238	ENSFHEG00000021221	rab13	95	85.549	Fundulus_heteroclitus
ENSSTOG00000011222	-	96	78.866	ENSGACG00000011925	rab13	96	78.866	Gasterosteus_aculeatus
ENSSTOG00000011222	-	93	86.772	ENSGAGG00000000742	-	99	83.663	Gopherus_agassizii
ENSSTOG00000011222	-	100	97.044	ENSGGOG00000023693	RAB13	100	97.044	Gorilla_gorilla
ENSSTOG00000011222	-	100	90.148	ENSHGLG00000008749	RAB13	100	90.148	Heterocephalus_glaber_female
ENSSTOG00000011222	-	100	90.148	ENSHGLG00100013608	RAB13	100	90.148	Heterocephalus_glaber_male
ENSSTOG00000011222	-	99	74.146	ENSHCOG00000007440	rab13	95	87.283	Hippocampus_comes
ENSSTOG00000011222	-	99	77.073	ENSIPUG00000003199	rab13	99	77.073	Ictalurus_punctatus
ENSSTOG00000011222	-	100	92.611	ENSJJAG00000010575	Rab13	100	92.611	Jaculus_jaculus
ENSSTOG00000011222	-	99	75.490	ENSKMAG00000001908	rab13	99	75.490	Kryptolebias_marmoratus
ENSSTOG00000011222	-	99	77.451	ENSLBEG00000026779	rab13	99	77.451	Labrus_bergylta
ENSSTOG00000011222	-	85	79.070	ENSLACG00000008103	-	97	79.070	Latimeria_chalumnae
ENSSTOG00000011222	-	100	97.044	ENSMFAG00000041018	RAB13	100	97.044	Macaca_fascicularis
ENSSTOG00000011222	-	100	97.044	ENSMNEG00000028951	-	100	97.044	Macaca_nemestrina
ENSSTOG00000011222	-	100	97.044	ENSMLEG00000042247	-	100	97.044	Mandrillus_leucophaeus
ENSSTOG00000011222	-	99	75.728	ENSMAMG00000014602	rab13	99	75.728	Mastacembelus_armatus
ENSSTOG00000011222	-	100	94.089	ENSMAUG00000015713	Rab13	100	94.089	Mesocricetus_auratus
ENSSTOG00000011222	-	100	95.074	ENSMICG00000010340	-	100	95.074	Microcebus_murinus
ENSSTOG00000011222	-	100	95.567	ENSMOCG00000021448	Rab13	100	95.567	Microtus_ochrogaster
ENSSTOG00000011222	-	99	91.584	ENSMODG00000017295	-	84	91.584	Monodelphis_domestica
ENSSTOG00000011222	-	100	91.626	MGP_CAROLIEiJ_G0025227	Rab13	100	91.626	Mus_caroli
ENSSTOG00000011222	-	100	90.640	ENSMUSG00000027935	Rab13	100	90.640	Mus_musculus
ENSSTOG00000011222	-	99	91.089	MGP_PahariEiJ_G0026671	Rab13	99	91.089	Mus_pahari
ENSSTOG00000011222	-	100	94.089	ENSNGAG00000010309	Rab13	100	94.089	Nannospalax_galili
ENSSTOG00000011222	-	99	76.098	ENSNBRG00000004124	rab13	99	76.098	Neolamprologus_brichardi
ENSSTOG00000011222	-	100	97.044	ENSNLEG00000028944	-	100	97.044	Nomascus_leucogenys
ENSSTOG00000011222	-	100	91.176	ENSMEUG00000009667	-	100	91.176	Notamacropus_eugenii
ENSSTOG00000011222	-	100	90.148	ENSODEG00000010443	-	100	90.148	Octodon_degus
ENSSTOG00000011222	-	63	97.638	ENSODEG00000012634	-	100	97.638	Octodon_degus
ENSSTOG00000011222	-	99	77.228	ENSONIG00000006340	rab13	99	77.228	Oreochromis_niloticus
ENSSTOG00000011222	-	87	96.045	ENSOCUG00000006286	-	99	96.045	Oryctolagus_cuniculus
ENSSTOG00000011222	-	98	79.397	ENSOMEG00000008210	rab13	99	76.699	Oryzias_melastigma
ENSSTOG00000011222	-	99	92.079	ENSOGAG00000016969	-	99	92.079	Otolemur_garnettii
ENSSTOG00000011222	-	100	97.044	ENSPPAG00000028435	-	100	97.044	Pan_paniscus
ENSSTOG00000011222	-	100	91.626	ENSPPRG00000008865	-	100	91.626	Panthera_pardus
ENSSTOG00000011222	-	100	97.044	ENSPTRG00000001370	RAB13	100	97.044	Pan_troglodytes
ENSSTOG00000011222	-	100	97.044	ENSPANG00000004479	-	100	97.044	Papio_anubis
ENSSTOG00000011222	-	99	75.980	ENSPMGG00000007680	rab13	99	75.980	Periophthalmus_magnuspinnatus
ENSSTOG00000011222	-	53	99.074	ENSPEMG00000017353	-	81	99.074	Peromyscus_maniculatus_bairdii
ENSSTOG00000011222	-	100	91.667	ENSPCIG00000029350	-	100	91.667	Phascolarctos_cinereus
ENSSTOG00000011222	-	95	75.635	ENSPLAG00000005832	RAB13	93	84.971	Poecilia_latipinna
ENSSTOG00000011222	-	85	84.971	ENSPREG00000017567	rab13	99	75.743	Poecilia_reticulata
ENSSTOG00000011222	-	100	97.044	ENSPPYG00000000790	-	100	97.044	Pongo_abelii
ENSSTOG00000011222	-	100	96.552	ENSPCOG00000012189	-	100	96.552	Propithecus_coquereli
ENSSTOG00000011222	-	100	94.089	ENSPVAG00000011095	-	100	94.089	Pteropus_vampyrus
ENSSTOG00000011222	-	85	87.283	ENSPNAG00000004189	rab13	92	87.283	Pygocentrus_nattereri
ENSSTOG00000011222	-	100	92.611	ENSRNOG00000016733	Rab13	100	92.611	Rattus_norvegicus
ENSSTOG00000011222	-	100	96.552	ENSRBIG00000008552	-	100	96.552	Rhinopithecus_bieti
ENSSTOG00000011222	-	100	96.552	ENSRROG00000036885	-	100	96.552	Rhinopithecus_roxellana
ENSSTOG00000011222	-	100	96.552	ENSSBOG00000020342	-	100	96.552	Saimiri_boliviensis_boliviensis
ENSSTOG00000011222	-	100	91.667	ENSSHAG00000011866	-	100	91.667	Sarcophilus_harrisii
ENSSTOG00000011222	-	100	97.044	ENSSSCG00000006564	-	100	97.044	Sus_scrofa
ENSSTOG00000011222	-	99	76.471	ENSTRUG00000024177	rab13	99	76.471	Takifugu_rubripes
ENSSTOG00000011222	-	100	96.059	ENSTBEG00000012734	-	100	96.059	Tupaia_belangeri
ENSSTOG00000011222	-	100	97.044	ENSTTRG00000011183	-	100	97.044	Tursiops_truncatus
ENSSTOG00000011222	-	70	81.119	ENSXETG00000020729	rab13	99	77.019	Xenopus_tropicalis
ENSSTOG00000011222	-	85	83.815	ENSXCOG00000019533	rab13	93	83.815	Xiphophorus_couchianus