EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSTOG00000011455 (Gene tree)
Gene ID: 101972711
Gene Symbol: POP1
Alias: -
Full Name: POP1 homolog%2C ribonuclease P/MRP subunit
Gene Type: protein_coding
Species: Ictidomys_tridecemlineatus
Status: putative
Strand: Minus strand
Length: 33941 bases
Position: chrJH393280.1:44676776-44710716
Accession: 101972711
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSTOP00000010284	POP1	PF06978.11	2.7e-38	1	2
ENSSTOP00000010284	POP1	PF06978.11	2.7e-38	2	2
ENSSTOP00000010284	POPLD	PF08170.12	1.8e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSTOT00000011459	POP1-201	4831	XM_005316312	ENSSTOP00000010284	1051 (aa)	XP_005316369	I3MHD6

Gene Model

Click here to download ENSSTOG00000011455's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSTOG00000011455's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSTOG00000011455	POP1	97	83.887	ENSG00000104356	POP1	100	90.164	Homo_sapiens
ENSSTOG00000011455	POP1	97	47.700	ENSAPOG00000008198	pop1	100	47.700	Acanthochromis_polyacanthus
ENSSTOG00000011455	POP1	97	77.573	ENSAMEG00000000556	POP1	100	77.573	Ailuropoda_melanoleuca
ENSSTOG00000011455	POP1	87	48.995	ENSACIG00000004169	POP1	100	46.660	Amphilophus_citrinellus
ENSSTOG00000011455	POP1	97	47.170	ENSAOCG00000010991	pop1	100	47.547	Amphiprion_ocellaris
ENSSTOG00000011455	POP1	88	46.722	ENSAPEG00000007607	pop1	96	47.555	Amphiprion_percula
ENSSTOG00000011455	POP1	97	46.009	ENSATEG00000024814	POP1	100	45.915	Anabas_testudineus
ENSSTOG00000011455	POP1	89	62.513	ENSAPLG00000014418	POP1	99	62.513	Anas_platyrhynchos
ENSSTOG00000011455	POP1	97	57.940	ENSACAG00000016083	POP1	100	57.940	Anolis_carolinensis
ENSSTOG00000011455	POP1	86	87.834	ENSANAG00000026360	POP1	99	87.834	Aotus_nancymaae
ENSSTOG00000011455	POP1	97	46.849	ENSACLG00000010951	pop1	100	47.136	Astatotilapia_calliptera
ENSSTOG00000011455	POP1	97	46.846	ENSAMXG00000014483	POP1	100	46.846	Astyanax_mexicanus
ENSSTOG00000011455	POP1	97	78.027	ENSBTAG00000012596	POP1	100	78.027	Bos_taurus
ENSSTOG00000011455	POP1	97	81.738	ENSCJAG00000015567	POP1	100	81.738	Callithrix_jacchus
ENSSTOG00000011455	POP1	97	78.824	ENSCAFG00000000469	POP1	100	78.824	Canis_familiaris
ENSSTOG00000011455	POP1	97	79.297	ENSCAFG00020026765	POP1	100	79.297	Canis_lupus_dingo
ENSSTOG00000011455	POP1	97	77.691	ENSCHIG00000017066	POP1	100	77.973	Capra_hircus
ENSSTOG00000011455	POP1	97	82.520	ENSTSYG00000003097	POP1	100	82.520	Carlito_syrichta
ENSSTOG00000011455	POP1	97	77.637	ENSCAPG00000007251	POP1	100	77.637	Cavia_aperea
ENSSTOG00000011455	POP1	97	80.569	ENSCPOG00000002901	POP1	100	80.569	Cavia_porcellus
ENSSTOG00000011455	POP1	97	81.836	ENSCCAG00000018939	POP1	100	81.836	Cebus_capucinus
ENSSTOG00000011455	POP1	97	82.910	ENSCATG00000040916	POP1	100	82.910	Cercocebus_atys
ENSSTOG00000011455	POP1	100	81.594	ENSCLAG00000007208	POP1	98	82.205	Chinchilla_lanigera
ENSSTOG00000011455	POP1	87	83.297	ENSCSAG00000012340	POP1	99	83.297	Chlorocebus_sabaeus
ENSSTOG00000011455	POP1	92	78.154	ENSCHOG00000011432	POP1	99	78.154	Choloepus_hoffmanni
ENSSTOG00000011455	POP1	97	65.336	ENSCPBG00000006373	POP1	100	65.725	Chrysemys_picta_bellii
ENSSTOG00000011455	POP1	80	38.521	ENSCING00000008323	-	88	38.521	Ciona_intestinalis
ENSSTOG00000011455	POP1	97	83.203	ENSCANG00000001647	POP1	100	83.203	Colobus_angolensis_palliatus
ENSSTOG00000011455	POP1	97	78.474	ENSCGRG00001017308	Pop1	100	78.474	Cricetulus_griseus_chok1gshd
ENSSTOG00000011455	POP1	97	72.798	ENSCGRG00000010824	Pop1	100	72.798	Cricetulus_griseus_crigri
ENSSTOG00000011455	POP1	97	45.143	ENSCSEG00000008737	POP1	100	45.825	Cynoglossus_semilaevis
ENSSTOG00000011455	POP1	97	47.660	ENSCVAG00000022248	pop1	100	47.660	Cyprinodon_variegatus
ENSSTOG00000011455	POP1	97	76.155	ENSDNOG00000019974	POP1	100	76.155	Dasypus_novemcinctus
ENSSTOG00000011455	POP1	97	73.705	ENSDORG00000015384	Pop1	100	74.878	Dipodomys_ordii
ENSSTOG00000011455	POP1	59	33.281	FBgn0026702	l(1)G0045	70	33.177	Drosophila_melanogaster
ENSSTOG00000011455	POP1	86	70.702	ENSETEG00000007839	POP1	88	70.702	Echinops_telfairi
ENSSTOG00000011455	POP1	97	82.341	ENSEASG00005003189	POP1	99	82.341	Equus_asinus_asinus
ENSSTOG00000011455	POP1	97	82.324	ENSECAG00000024236	POP1	100	82.324	Equus_caballus
ENSSTOG00000011455	POP1	65	72.973	ENSEEUG00000003050	-	70	72.973	Erinaceus_europaeus
ENSSTOG00000011455	POP1	97	46.827	ENSELUG00000003526	pop1	100	47.363	Esox_lucius
ENSSTOG00000011455	POP1	97	81.836	ENSFCAG00000002168	POP1	100	81.836	Felis_catus
ENSSTOG00000011455	POP1	97	58.357	ENSFALG00000005711	POP1	100	58.357	Ficedula_albicollis
ENSSTOG00000011455	POP1	97	82.566	ENSFDAG00000017068	POP1	100	82.566	Fukomys_damarensis
ENSSTOG00000011455	POP1	97	45.617	ENSFHEG00000019518	pop1	100	45.900	Fundulus_heteroclitus
ENSSTOG00000011455	POP1	92	46.215	ENSGMOG00000000659	POP1	99	46.215	Gadus_morhua
ENSSTOG00000011455	POP1	97	47.139	ENSGAFG00000019770	POP1	100	47.139	Gambusia_affinis
ENSSTOG00000011455	POP1	97	45.881	ENSGACG00000003499	pop1	100	45.881	Gasterosteus_aculeatus
ENSSTOG00000011455	POP1	97	64.597	ENSGAGG00000011737	POP1	98	64.791	Gopherus_agassizii
ENSSTOG00000011455	POP1	97	83.301	ENSGGOG00000003176	POP1	100	83.301	Gorilla_gorilla
ENSSTOG00000011455	POP1	97	47.180	ENSHBUG00000021583	pop1	100	47.042	Haplochromis_burtoni
ENSSTOG00000011455	POP1	97	82.307	ENSHGLG00000006029	POP1	100	82.307	Heterocephalus_glaber_female
ENSSTOG00000011455	POP1	97	82.307	ENSHGLG00100016879	POP1	100	82.307	Heterocephalus_glaber_male
ENSSTOG00000011455	POP1	87	49.787	ENSHCOG00000013888	pop1	96	49.787	Hippocampus_comes
ENSSTOG00000011455	POP1	97	45.312	ENSIPUG00000018336	pop1	100	45.312	Ictalurus_punctatus
ENSSTOG00000011455	POP1	97	76.885	ENSJJAG00000013325	Pop1	100	76.885	Jaculus_jaculus
ENSSTOG00000011455	POP1	97	45.910	ENSKMAG00000001346	POP1	100	46.391	Kryptolebias_marmoratus
ENSSTOG00000011455	POP1	86	47.996	ENSLBEG00000024457	POP1	100	45.516	Labrus_bergylta
ENSSTOG00000011455	POP1	89	56.701	ENSLACG00000012498	POP1	98	56.804	Latimeria_chalumnae
ENSSTOG00000011455	POP1	97	51.257	ENSLOCG00000009817	POP1	100	51.688	Lepisosteus_oculatus
ENSSTOG00000011455	POP1	97	81.871	ENSLAFG00000010770	POP1	100	81.871	Loxodonta_africana
ENSSTOG00000011455	POP1	97	82.910	ENSMFAG00000000347	POP1	100	82.910	Macaca_fascicularis
ENSSTOG00000011455	POP1	97	82.617	ENSMNEG00000036870	POP1	100	82.617	Macaca_nemestrina
ENSSTOG00000011455	POP1	97	82.812	ENSMLEG00000034986	POP1	100	82.812	Mandrillus_leucophaeus
ENSSTOG00000011455	POP1	97	45.377	ENSMAMG00000004040	pop1	100	45.420	Mastacembelus_armatus
ENSSTOG00000011455	POP1	97	47.180	ENSMZEG00005025448	pop1	100	47.230	Maylandia_zebra
ENSSTOG00000011455	POP1	97	57.048	ENSMGAG00000012167	POP1	100	57.564	Meleagris_gallopavo
ENSSTOG00000011455	POP1	97	78.082	ENSMAUG00000017537	Pop1	100	78.082	Mesocricetus_auratus
ENSSTOG00000011455	POP1	97	84.066	ENSMICG00000004361	POP1	100	84.066	Microcebus_murinus
ENSSTOG00000011455	POP1	97	77.157	ENSMOCG00000006356	Pop1	100	77.647	Microtus_ochrogaster
ENSSTOG00000011455	POP1	97	43.495	ENSMMOG00000018242	pop1	100	43.495	Mola_mola
ENSSTOG00000011455	POP1	97	68.023	ENSMODG00000006561	POP1	100	68.023	Monodelphis_domestica
ENSSTOG00000011455	POP1	90	51.507	ENSMALG00000012621	POP1	100	47.048	Monopterus_albus
ENSSTOG00000011455	POP1	97	77.375	MGP_CAROLIEiJ_G0019726	Pop1	100	77.375	Mus_caroli
ENSSTOG00000011455	POP1	97	77.669	ENSMUSG00000022325	Pop1	100	77.669	Mus_musculus
ENSSTOG00000011455	POP1	97	77.865	MGP_PahariEiJ_G0019735	Pop1	100	77.865	Mus_pahari
ENSSTOG00000011455	POP1	97	77.473	MGP_SPRETEiJ_G0020622	Pop1	100	77.473	Mus_spretus
ENSSTOG00000011455	POP1	97	79.883	ENSMPUG00000015250	POP1	100	79.883	Mustela_putorius_furo
ENSSTOG00000011455	POP1	97	75.049	ENSMLUG00000010204	POP1	100	75.146	Myotis_lucifugus
ENSSTOG00000011455	POP1	97	82.991	ENSNGAG00000001582	Pop1	100	82.991	Nannospalax_galili
ENSSTOG00000011455	POP1	86	47.863	ENSNBRG00000002356	pop1	94	48.046	Neolamprologus_brichardi
ENSSTOG00000011455	POP1	97	82.812	ENSNLEG00000002541	POP1	100	82.812	Nomascus_leucogenys
ENSSTOG00000011455	POP1	91	60.083	ENSMEUG00000003118	POP1	98	60.083	Notamacropus_eugenii
ENSSTOG00000011455	POP1	97	77.647	ENSOPRG00000007667	POP1	100	77.647	Ochotona_princeps
ENSSTOG00000011455	POP1	97	80.607	ENSODEG00000003984	POP1	100	80.607	Octodon_degus
ENSSTOG00000011455	POP1	97	48.569	ENSONIG00000016445	pop1	100	48.390	Oreochromis_niloticus
ENSSTOG00000011455	POP1	59	69.412	ENSOANG00000001278	-	95	69.412	Ornithorhynchus_anatinus
ENSSTOG00000011455	POP1	97	79.786	ENSOCUG00000017400	POP1	100	79.786	Oryctolagus_cuniculus
ENSSTOG00000011455	POP1	89	48.431	ENSORLG00000002839	pop1	100	46.679	Oryzias_latipes
ENSSTOG00000011455	POP1	87	47.803	ENSORLG00020022450	POP1	96	47.970	Oryzias_latipes_hni
ENSSTOG00000011455	POP1	89	48.532	ENSORLG00015012746	POP1	100	46.770	Oryzias_latipes_hsok
ENSSTOG00000011455	POP1	97	47.093	ENSOMEG00000006915	pop1	99	47.287	Oryzias_melastigma
ENSSTOG00000011455	POP1	97	81.854	ENSOGAG00000001466	POP1	100	81.854	Otolemur_garnettii
ENSSTOG00000011455	POP1	97	83.594	ENSPPAG00000018410	POP1	100	83.594	Pan_paniscus
ENSSTOG00000011455	POP1	97	81.481	ENSPPRG00000005002	POP1	100	81.481	Panthera_pardus
ENSSTOG00000011455	POP1	97	81.774	ENSPTIG00000016527	POP1	100	81.774	Panthera_tigris_altaica
ENSSTOG00000011455	POP1	97	83.301	ENSPTRG00000020458	POP1	100	83.301	Pan_troglodytes
ENSSTOG00000011455	POP1	97	82.617	ENSPANG00000009704	POP1	100	82.617	Papio_anubis
ENSSTOG00000011455	POP1	97	49.424	ENSPKIG00000016325	POP1	100	49.328	Paramormyrops_kingsleyae
ENSSTOG00000011455	POP1	97	63.434	ENSPSIG00000012343	POP1	100	63.434	Pelodiscus_sinensis
ENSSTOG00000011455	POP1	87	48.596	ENSPMGG00000022253	POP1	95	48.984	Periophthalmus_magnuspinnatus
ENSSTOG00000011455	POP1	97	76.798	ENSPEMG00000023633	Pop1	100	76.798	Peromyscus_maniculatus_bairdii
ENSSTOG00000011455	POP1	87	42.736	ENSPMAG00000003209	POP1	100	42.978	Petromyzon_marinus
ENSSTOG00000011455	POP1	97	66.378	ENSPCIG00000012216	POP1	100	66.571	Phascolarctos_cinereus
ENSSTOG00000011455	POP1	97	47.008	ENSPFOG00000012490	POP1	100	47.104	Poecilia_formosa
ENSSTOG00000011455	POP1	97	47.246	ENSPLAG00000004646	POP1	100	47.246	Poecilia_latipinna
ENSSTOG00000011455	POP1	97	47.155	ENSPMEG00000019592	POP1	100	47.155	Poecilia_mexicana
ENSSTOG00000011455	POP1	97	46.563	ENSPREG00000020951	POP1	100	46.563	Poecilia_reticulata
ENSSTOG00000011455	POP1	97	83.203	ENSPPYG00000018777	POP1	100	83.203	Pongo_abelii
ENSSTOG00000011455	POP1	97	74.560	ENSPCAG00000016662	POP1	100	74.560	Procavia_capensis
ENSSTOG00000011455	POP1	97	84.262	ENSPCOG00000019420	POP1	100	84.262	Propithecus_coquereli
ENSSTOG00000011455	POP1	97	80.683	ENSPVAG00000014468	POP1	100	80.683	Pteropus_vampyrus
ENSSTOG00000011455	POP1	86	48.339	ENSPNYG00000004476	pop1	95	48.568	Pundamilia_nyererei
ENSSTOG00000011455	POP1	97	45.656	ENSPNAG00000000265	pop1	100	45.656	Pygocentrus_nattereri
ENSSTOG00000011455	POP1	97	77.571	ENSRNOG00000005243	Pop1	100	77.571	Rattus_norvegicus
ENSSTOG00000011455	POP1	97	83.008	ENSRBIG00000007996	POP1	100	83.008	Rhinopithecus_bieti
ENSSTOG00000011455	POP1	97	83.105	ENSRROG00000012334	POP1	100	83.105	Rhinopithecus_roxellana
ENSSTOG00000011455	POP1	96	82.905	ENSSBOG00000020830	POP1	100	82.905	Saimiri_boliviensis_boliviensis
ENSSTOG00000011455	POP1	97	67.184	ENSSHAG00000000296	POP1	100	67.184	Sarcophilus_harrisii
ENSSTOG00000011455	POP1	97	48.467	ENSSFOG00015007429	pop1	99	48.467	Scleropages_formosus
ENSSTOG00000011455	POP1	83	52.214	ENSSMAG00000010467	POP1	98	47.156	Scophthalmus_maximus
ENSSTOG00000011455	POP1	97	46.786	ENSSDUG00000007817	POP1	100	46.786	Seriola_dumerili
ENSSTOG00000011455	POP1	97	46.692	ENSSLDG00000012565	POP1	100	46.692	Seriola_lalandi_dorsalis
ENSSTOG00000011455	POP1	97	60.311	ENSSPUG00000003550	-	100	60.603	Sphenodon_punctatus
ENSSTOG00000011455	POP1	97	47.287	ENSSPAG00000014955	pop1	100	47.328	Stegastes_partitus
ENSSTOG00000011455	POP1	97	77.615	ENSSSCG00000006078	POP1	100	77.615	Sus_scrofa
ENSSTOG00000011455	POP1	89	55.777	ENSTGUG00000012011	-	100	56.151	Taeniopygia_guttata
ENSSTOG00000011455	POP1	88	47.182	ENSTRUG00000010856	pop1	94	47.182	Takifugu_rubripes
ENSSTOG00000011455	POP1	89	47.777	ENSTNIG00000013297	pop1	99	47.732	Tetraodon_nigroviridis
ENSSTOG00000011455	POP1	92	77.766	ENSTBEG00000014214	POP1	99	77.766	Tupaia_belangeri
ENSSTOG00000011455	POP1	97	78.613	ENSTTRG00000016071	POP1	100	78.613	Tursiops_truncatus
ENSSTOG00000011455	POP1	96	75.542	ENSUAMG00000017309	POP1	100	75.542	Ursus_americanus
ENSSTOG00000011455	POP1	89	89.069	ENSUMAG00000016952	POP1	100	89.069	Ursus_maritimus
ENSSTOG00000011455	POP1	80	85.766	ENSVPAG00000008278	POP1	82	85.766	Vicugna_pacos
ENSSTOG00000011455	POP1	97	79.883	ENSVVUG00000010994	POP1	100	79.883	Vulpes_vulpes
ENSSTOG00000011455	POP1	97	41.920	ENSXCOG00000017043	POP1	100	42.517	Xiphophorus_couchianus
ENSSTOG00000011455	POP1	97	46.525	ENSXMAG00000002472	POP1	100	46.525	Xiphophorus_maculatus