EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSTOG00000011471 (Gene tree)
Gene ID: 101958877
Gene Symbol: PAPOLA
Alias: PAP
Full Name: poly(A) polymerase alpha
Gene Type: protein_coding
Species: Ictidomys_tridecemlineatus
Status: putative
Strand: Plus strand
Length: 64556 bases
Position: chrJH393414.1:770054-834609
Accession: 101958877
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSTOP00000010305	PAP_RNA-bind	PF04926.15	4.9e-25	1	1
ENSSTOP00000024532	PAP_RNA-bind	PF04926.15	4.8e-23	1	1
ENSSTOP00000024829	PAP_RNA-bind	PF04926.15	5.4e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSTOT00000011484	PAPOLA-203	2082	-	ENSSTOP00000010305	693 (aa)	-	I3MHF0
ENSSTOT00000033348	PAPOLA-202	6468	XM_013362235	ENSSTOP00000024532	718 (aa)	XP_013217689	A0A287CTC7
ENSSTOT00000038716	PAPOLA-201	6545	XM_005333898	ENSSTOP00000024829	739 (aa)	XP_005333955	A0A287CU76

Gene Model

Click here to download ENSSTOG00000011471's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSTOG00000011471's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSTOG00000011471	PAPOLA	98	60.952	ENSSTOG00000010861	PAPOLG	99	61.507

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSTOG00000011471	PAPOLA	100	98.066	ENSG00000090060	PAPOLA	99	99.091	Homo_sapiens
ENSSTOG00000011471	PAPOLA	99	98.238	ENSAMEG00000014142	PAPOLA	99	98.238	Ailuropoda_melanoleuca
ENSSTOG00000011471	PAPOLA	99	91.463	ENSAPLG00000006645	PAPOLA	99	91.045	Anas_platyrhynchos
ENSSTOG00000011471	PAPOLA	99	92.287	ENSACAG00000013474	PAPOLA	99	95.599	Anolis_carolinensis
ENSSTOG00000011471	PAPOLA	100	97.928	ENSANAG00000018274	PAPOLA	100	98.553	Aotus_nancymaae
ENSSTOG00000011471	PAPOLA	77	91.760	ENSANAG00000027941	-	98	91.760	Aotus_nancymaae
ENSSTOG00000011471	PAPOLA	100	73.391	ENSAMXG00000018141	papola	99	85.099	Astyanax_mexicanus
ENSSTOG00000011471	PAPOLA	100	98.557	ENSBTAG00000004054	PAPOLA	100	98.557	Bos_taurus
ENSSTOG00000011471	PAPOLA	100	98.140	ENSCJAG00000006512	PAPOLA	99	99.449	Callithrix_jacchus
ENSSTOG00000011471	PAPOLA	100	97.852	ENSCAFG00000017783	PAPOLA	100	97.852	Canis_familiaris
ENSSTOG00000011471	PAPOLA	100	98.376	ENSCAFG00020011550	PAPOLA	100	98.376	Canis_lupus_dingo
ENSSTOG00000011471	PAPOLA	100	98.106	ENSCHIG00000025004	-	100	98.106	Capra_hircus
ENSSTOG00000011471	PAPOLA	99	97.971	ENSTSYG00000012384	PAPOLA	99	97.971	Carlito_syrichta
ENSSTOG00000011471	PAPOLA	100	93.939	ENSCPOG00000002648	PAPOLA	100	93.939	Cavia_porcellus
ENSSTOG00000011471	PAPOLA	100	98.066	ENSCCAG00000025120	PAPOLA	100	98.066	Cebus_capucinus
ENSSTOG00000011471	PAPOLA	100	98.204	ENSCATG00000018815	PAPOLA	99	99.814	Cercocebus_atys
ENSSTOG00000011471	PAPOLA	100	98.124	ENSCLAG00000016342	PAPOLA	100	98.124	Chinchilla_lanigera
ENSSTOG00000011471	PAPOLA	100	98.121	ENSCSAG00000010516	PAPOLA	100	98.121	Chlorocebus_sabaeus
ENSSTOG00000011471	PAPOLA	72	84.196	ENSCHOG00000001115	PAPOLA	72	84.196	Choloepus_hoffmanni
ENSSTOG00000011471	PAPOLA	100	93.378	ENSCPBG00000024125	PAPOLA	100	93.378	Chrysemys_picta_bellii
ENSSTOG00000011471	PAPOLA	99	92.867	ENSCANG00000000159	PAPOLA	100	92.867	Colobus_angolensis_palliatus
ENSSTOG00000011471	PAPOLA	100	88.227	ENSCGRG00001000229	-	99	89.871	Cricetulus_griseus_chok1gshd
ENSSTOG00000011471	PAPOLA	100	97.547	ENSCGRG00001022693	-	100	97.547	Cricetulus_griseus_chok1gshd
ENSSTOG00000011471	PAPOLA	99	84.417	ENSCGRG00001002732	-	99	84.417	Cricetulus_griseus_chok1gshd
ENSSTOG00000011471	PAPOLA	99	97.536	ENSCGRG00000003664	-	100	97.536	Cricetulus_griseus_crigri
ENSSTOG00000011471	PAPOLA	100	84.278	ENSCGRG00000000257	-	100	84.278	Cricetulus_griseus_crigri
ENSSTOG00000011471	PAPOLA	98	81.267	ENSCGRG00000001888	-	96	80.854	Cricetulus_griseus_crigri
ENSSTOG00000011471	PAPOLA	70	53.942	ENSCSEG00000001841	-	71	53.942	Cynoglossus_semilaevis
ENSSTOG00000011471	PAPOLA	100	71.212	ENSDARG00000009585	papola	100	70.799	Danio_rerio
ENSSTOG00000011471	PAPOLA	65	90.678	ENSDORG00000013415	-	100	91.949	Dipodomys_ordii
ENSSTOG00000011471	PAPOLA	99	84.261	ENSETEG00000004889	PAPOLA	100	84.125	Echinops_telfairi
ENSSTOG00000011471	PAPOLA	100	69.363	ENSELUG00000018972	papola	100	68.966	Esox_lucius
ENSSTOG00000011471	PAPOLA	100	99.134	ENSFCAG00000006784	PAPOLA	100	99.134	Felis_catus
ENSSTOG00000011471	PAPOLA	99	93.750	ENSFALG00000002547	PAPOLA	98	87.763	Ficedula_albicollis
ENSSTOG00000011471	PAPOLA	99	96.957	ENSFDAG00000010370	PAPOLA	100	96.957	Fukomys_damarensis
ENSSTOG00000011471	PAPOLA	73	66.179	ENSGMOG00000010209	papola	100	66.545	Gadus_morhua
ENSSTOG00000011471	PAPOLA	100	90.811	ENSGALG00000033099	PAPOLA	100	90.392	Gallus_gallus
ENSSTOG00000011471	PAPOLA	69	54.583	ENSGACG00000006142	-	100	54.167	Gasterosteus_aculeatus
ENSSTOG00000011471	PAPOLA	96	95.619	ENSGAGG00000020500	PAPOLA	99	95.619	Gopherus_agassizii
ENSSTOG00000011471	PAPOLA	100	98.066	ENSGGOG00000006287	PAPOLA	100	98.066	Gorilla_gorilla
ENSSTOG00000011471	PAPOLA	100	79.026	ENSHGLG00000007467	-	100	78.825	Heterocephalus_glaber_female
ENSSTOG00000011471	PAPOLA	100	97.547	ENSHGLG00000007909	-	100	97.547	Heterocephalus_glaber_female
ENSSTOG00000011471	PAPOLA	99	85.286	ENSHGLG00000017457	-	100	84.605	Heterocephalus_glaber_female
ENSSTOG00000011471	PAPOLA	100	97.403	ENSHGLG00100017273	PAPOLA	100	97.403	Heterocephalus_glaber_male
ENSSTOG00000011471	PAPOLA	100	68.020	ENSIPUG00000005919	papola	100	67.261	Ictalurus_punctatus
ENSSTOG00000011471	PAPOLA	99	97.681	ENSJJAG00000024340	Papola	100	97.681	Jaculus_jaculus
ENSSTOG00000011471	PAPOLA	99	77.598	ENSLACG00000018136	PAPOLA	99	77.598	Latimeria_chalumnae
ENSSTOG00000011471	PAPOLA	99	66.086	ENSLOCG00000008632	papola	99	66.354	Lepisosteus_oculatus
ENSSTOG00000011471	PAPOLA	99	97.283	ENSLAFG00000000946	PAPOLA	99	97.283	Loxodonta_africana
ENSSTOG00000011471	PAPOLA	100	98.204	ENSMFAG00000001792	PAPOLA	99	99.630	Macaca_fascicularis
ENSSTOG00000011471	PAPOLA	100	98.121	ENSMMUG00000018610	PAPOLA	100	98.135	Macaca_mulatta
ENSSTOG00000011471	PAPOLA	100	98.204	ENSMNEG00000043747	PAPOLA	100	98.204	Macaca_nemestrina
ENSSTOG00000011471	PAPOLA	100	98.204	ENSMLEG00000032066	PAPOLA	100	98.204	Mandrillus_leucophaeus
ENSSTOG00000011471	PAPOLA	84	89.871	ENSMGAG00000013228	-	100	89.372	Meleagris_gallopavo
ENSSTOG00000011471	PAPOLA	100	97.980	ENSMAUG00000017178	Papola	100	97.980	Mesocricetus_auratus
ENSSTOG00000011471	PAPOLA	100	99.188	ENSMICG00000010347	PAPOLA	100	99.188	Microcebus_murinus
ENSSTOG00000011471	PAPOLA	100	97.980	ENSMOCG00000021670	Papola	100	97.980	Microtus_ochrogaster
ENSSTOG00000011471	PAPOLA	100	97.158	ENSMODG00000012887	-	100	97.158	Monodelphis_domestica
ENSSTOG00000011471	PAPOLA	99	82.361	ENSMODG00000001969	-	99	82.500	Monodelphis_domestica
ENSSTOG00000011471	PAPOLA	100	96.970	MGP_CAROLIEiJ_G0018093	Papola	100	96.970	Mus_caroli
ENSSTOG00000011471	PAPOLA	100	97.258	ENSMUSG00000021111	Papola	100	97.258	Mus_musculus
ENSSTOG00000011471	PAPOLA	100	97.258	MGP_PahariEiJ_G0029850	Papola	100	97.258	Mus_pahari
ENSSTOG00000011471	PAPOLA	100	97.403	MGP_SPRETEiJ_G0018943	Papola	100	97.403	Mus_spretus
ENSSTOG00000011471	PAPOLA	100	98.782	ENSMPUG00000003054	PAPOLA	100	98.782	Mustela_putorius_furo
ENSSTOG00000011471	PAPOLA	100	96.346	ENSMLUG00000010922	PAPOLA	100	96.346	Myotis_lucifugus
ENSSTOG00000011471	PAPOLA	100	97.691	ENSNGAG00000022172	Papola	100	97.691	Nannospalax_galili
ENSSTOG00000011471	PAPOLA	99	92.819	ENSNLEG00000000625	PAPOLA	100	92.819	Nomascus_leucogenys
ENSSTOG00000011471	PAPOLA	67	90.909	ENSMEUG00000007831	-	74	90.551	Notamacropus_eugenii
ENSSTOG00000011471	PAPOLA	97	92.233	ENSOPRG00000007625	PAPOLA	100	92.233	Ochotona_princeps
ENSSTOG00000011471	PAPOLA	69	54.412	ENSONIG00000001062	-	96	54.412	Oreochromis_niloticus
ENSSTOG00000011471	PAPOLA	99	97.250	ENSOANG00000013812	PAPOLA	99	97.250	Ornithorhynchus_anatinus
ENSSTOG00000011471	PAPOLA	99	95.794	ENSOCUG00000011531	PAPOLA	99	95.794	Oryctolagus_cuniculus
ENSSTOG00000011471	PAPOLA	100	98.784	ENSOGAG00000004611	PAPOLA	100	98.784	Otolemur_garnettii
ENSSTOG00000011471	PAPOLA	100	98.376	ENSOARG00000016579	-	100	98.376	Ovis_aries
ENSSTOG00000011471	PAPOLA	100	98.066	ENSPPAG00000030505	PAPOLA	100	98.066	Pan_paniscus
ENSSTOG00000011471	PAPOLA	100	99.053	ENSPPRG00000008616	PAPOLA	100	99.053	Panthera_pardus
ENSSTOG00000011471	PAPOLA	99	99.049	ENSPTIG00000018852	PAPOLA	99	99.049	Panthera_tigris_altaica
ENSSTOG00000011471	PAPOLA	100	98.066	ENSPTRG00000006704	PAPOLA	100	98.066	Pan_troglodytes
ENSSTOG00000011471	PAPOLA	100	98.204	ENSPANG00000025582	PAPOLA	100	98.204	Papio_anubis
ENSSTOG00000011471	PAPOLA	100	70.748	ENSPKIG00000014471	papola	100	70.924	Paramormyrops_kingsleyae
ENSSTOG00000011471	PAPOLA	100	93.514	ENSPSIG00000014157	PAPOLA	87	93.514	Pelodiscus_sinensis
ENSSTOG00000011471	PAPOLA	100	97.835	ENSPEMG00000000043	Papola	100	97.835	Peromyscus_maniculatus_bairdii
ENSSTOG00000011471	PAPOLA	100	97.027	ENSPCIG00000013234	PAPOLA	100	97.089	Phascolarctos_cinereus
ENSSTOG00000011471	PAPOLA	100	95.570	ENSPPYG00000006128	PAPOLA	100	95.570	Pongo_abelii
ENSSTOG00000011471	PAPOLA	89	90.701	ENSPCAG00000004199	PAPOLA	100	90.701	Procavia_capensis
ENSSTOG00000011471	PAPOLA	99	95.670	ENSPCOG00000022117	PAPOLA	99	95.670	Propithecus_coquereli
ENSSTOG00000011471	PAPOLA	100	97.429	ENSPVAG00000013925	PAPOLA	100	97.429	Pteropus_vampyrus
ENSSTOG00000011471	PAPOLA	100	72.779	ENSPNAG00000010467	papola	100	72.664	Pygocentrus_nattereri
ENSSTOG00000011471	PAPOLA	100	95.940	ENSRNOG00000004827	Papola	100	95.940	Rattus_norvegicus
ENSSTOG00000011471	PAPOLA	99	97.418	ENSRBIG00000038490	PAPOLA	100	97.418	Rhinopithecus_bieti
ENSSTOG00000011471	PAPOLA	100	98.204	ENSRROG00000025545	PAPOLA	100	98.204	Rhinopithecus_roxellana
ENSSTOG00000011471	PAPOLA	99	97.991	ENSSBOG00000024061	PAPOLA	100	97.991	Saimiri_boliviensis_boliviensis
ENSSTOG00000011471	PAPOLA	99	96.603	ENSSHAG00000015211	PAPOLA	99	96.603	Sarcophilus_harrisii
ENSSTOG00000011471	PAPOLA	100	71.277	ENSSFOG00015004431	papola	99	84.991	Scleropages_formosus
ENSSTOG00000011471	PAPOLA	98	47.877	ENSSDUG00000018247	-	97	47.399	Seriola_dumerili
ENSSTOG00000011471	PAPOLA	100	93.108	ENSSPUG00000005835	PAPOLA	100	93.108	Sphenodon_punctatus
ENSSTOG00000011471	PAPOLA	100	98.846	ENSSSCG00000002505	-	100	98.846	Sus_scrofa
ENSSTOG00000011471	PAPOLA	99	91.180	ENSTGUG00000012687	PAPOLA	99	90.625	Taeniopygia_guttata
ENSSTOG00000011471	PAPOLA	75	88.043	ENSTBEG00000000194	PAPOLA	75	89.017	Tupaia_belangeri
ENSSTOG00000011471	PAPOLA	80	98.701	ENSTTRG00000005717	PAPOLA	80	98.701	Tursiops_truncatus
ENSSTOG00000011471	PAPOLA	61	99.289	ENSUAMG00000025737	PAPOLA	98	99.289	Ursus_americanus
ENSSTOG00000011471	PAPOLA	99	98.098	ENSVPAG00000006464	PAPOLA	100	98.098	Vicugna_pacos
ENSSTOG00000011471	PAPOLA	100	98.846	ENSVVUG00000028340	PAPOLA	100	98.846	Vulpes_vulpes
ENSSTOG00000011471	PAPOLA	100	83.696	ENSXETG00000013949	papola	100	83.696	Xenopus_tropicalis