EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSTOG00000011790 (Gene tree)
Gene ID: 101964746
Gene Symbol: RRP1B
Alias: KIAA0179|Nnp1|PPP1R136|RRP1
Full Name: ribosomal RNA processing 1B
Gene Type: protein_coding
Species: Ictidomys_tridecemlineatus
Status: putative
Strand: Minus strand
Length: 25708 bases
Position: chrJH393310.1:575401-601108
Accession: 101964746
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSTOP00000024935	Nop52	PF05997.12	8.4e-73	1	1
ENSSTOP00000010578	Nop52	PF05997.12	9.2e-73	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSTOT00000035794	RRP1B-201	2682	XM_013357822	ENSSTOP00000024935	714 (aa)	XP_013213276	A0A287CUC9
ENSSTOT00000011795	RRP1B-202	2997	XM_005323445	ENSSTOP00000010578	755 (aa)	XP_005323502	I3MI00

Gene Model

Click here to download ENSSTOG00000011790's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSTOG00000011790's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSTOG00000011790	RRP1B	53	50.794	ENSSTOG00000011116	RRP1	75	52.647

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSTOG00000011790	RRP1B	96	71.711	ENSG00000160208	RRP1B	99	71.011	Homo_sapiens
ENSSTOG00000011790	RRP1B	64	44.142	ENSAPOG00000007490	-	51	45.143	Acanthochromis_polyacanthus
ENSSTOG00000011790	RRP1B	54	49.482	ENSAMEG00000011448	RRP1	73	52.786	Ailuropoda_melanoleuca
ENSSTOG00000011790	RRP1B	60	74.710	ENSAMEG00000011401	RRP1B	56	75.787	Ailuropoda_melanoleuca
ENSSTOG00000011790	RRP1B	64	43.836	ENSAOCG00000017894	-	91	53.409	Amphiprion_ocellaris
ENSSTOG00000011790	RRP1B	96	69.777	ENSANAG00000034889	RRP1B	99	69.190	Aotus_nancymaae
ENSSTOG00000011790	RRP1B	55	48.855	ENSBTAG00000003981	RRP1	75	52.632	Bos_taurus
ENSSTOG00000011790	RRP1B	96	62.418	ENSBTAG00000017418	RRP1B	99	61.733	Bos_taurus
ENSSTOG00000011790	RRP1B	96	68.289	ENSCJAG00000017077	RRP1B	99	68.085	Callithrix_jacchus
ENSSTOG00000011790	RRP1B	53	51.302	ENSCJAG00000043205	RRP1	68	53.235	Callithrix_jacchus
ENSSTOG00000011790	RRP1B	52	48.947	ENSCAFG00000010646	RRP1	79	48.549	Canis_familiaris
ENSSTOG00000011790	RRP1B	91	67.626	ENSCAFG00000010621	RRP1B	99	67.283	Canis_familiaris
ENSSTOG00000011790	RRP1B	96	67.703	ENSCAFG00020018901	RRP1B	99	68.213	Canis_lupus_dingo
ENSSTOG00000011790	RRP1B	52	48.947	ENSCAFG00020018979	RRP1	73	52.770	Canis_lupus_dingo
ENSSTOG00000011790	RRP1B	96	63.026	ENSCHIG00000021519	RRP1B	99	62.083	Capra_hircus
ENSSTOG00000011790	RRP1B	96	64.793	ENSCPOG00000002396	RRP1B	99	64.547	Cavia_porcellus
ENSSTOG00000011790	RRP1B	57	49.034	ENSCCAG00000029828	RRP1	72	52.786	Cebus_capucinus
ENSSTOG00000011790	RRP1B	96	70.395	ENSCCAG00000029384	RRP1B	99	70.213	Cebus_capucinus
ENSSTOG00000011790	RRP1B	51	51.913	ENSCATG00000015632	RRP1	72	53.509	Cercocebus_atys
ENSSTOG00000011790	RRP1B	96	72.500	ENSCATG00000017423	RRP1B	99	71.809	Cercocebus_atys
ENSSTOG00000011790	RRP1B	58	45.694	ENSCLAG00000011639	RRP1	73	50.292	Chinchilla_lanigera
ENSSTOG00000011790	RRP1B	96	65.473	ENSCLAG00000005622	RRP1B	99	65.375	Chinchilla_lanigera
ENSSTOG00000011790	RRP1B	96	72.105	ENSCSAG00000007961	RRP1B	99	71.543	Chlorocebus_sabaeus
ENSSTOG00000011790	RRP1B	53	62.338	ENSCHOG00000002426	-	53	67.378	Choloepus_hoffmanni
ENSSTOG00000011790	RRP1B	96	49.481	ENSCPBG00000010310	RRP1B	98	47.123	Chrysemys_picta_bellii
ENSSTOG00000011790	RRP1B	55	33.911	ENSCING00000003304	-	75	34.561	Ciona_intestinalis
ENSSTOG00000011790	RRP1B	96	72.368	ENSCANG00000040952	RRP1B	99	72.074	Colobus_angolensis_palliatus
ENSSTOG00000011790	RRP1B	96	68.393	ENSCGRG00001010889	-	99	66.891	Cricetulus_griseus_chok1gshd
ENSSTOG00000011790	RRP1B	96	68.127	ENSCGRG00001023882	-	99	66.622	Cricetulus_griseus_chok1gshd
ENSSTOG00000011790	RRP1B	91	67.465	ENSCGRG00000001553	Rrp1b	97	65.867	Cricetulus_griseus_crigri
ENSSTOG00000011790	RRP1B	61	52.747	ENSCSEG00000020711	-	75	52.747	Cynoglossus_semilaevis
ENSSTOG00000011790	RRP1B	51	40.650	ENSCVAG00000017568	-	87	42.697	Cyprinodon_variegatus
ENSSTOG00000011790	RRP1B	96	62.351	ENSDNOG00000032774	RRP1B	99	61.816	Dasypus_novemcinctus
ENSSTOG00000011790	RRP1B	61	47.260	ENSDNOG00000019880	RRP1	74	53.097	Dasypus_novemcinctus
ENSSTOG00000011790	RRP1B	90	59.384	ENSDORG00000005496	Rrp1b	100	59.944	Dipodomys_ordii
ENSSTOG00000011790	RRP1B	96	56.267	ENSETEG00000019489	RRP1B	99	55.870	Echinops_telfairi
ENSSTOG00000011790	RRP1B	53	48.177	ENSEASG00005001673	RRP1	77	50.142	Equus_asinus_asinus
ENSSTOG00000011790	RRP1B	96	68.379	ENSEASG00005001687	RRP1B	99	67.647	Equus_asinus_asinus
ENSSTOG00000011790	RRP1B	53	47.656	ENSECAG00000015703	RRP1	77	50.847	Equus_caballus
ENSSTOG00000011790	RRP1B	96	67.984	ENSECAG00000018018	RRP1B	99	67.380	Equus_caballus
ENSSTOG00000011790	RRP1B	64	50.407	ENSELUG00000015885	-	87	46.296	Esox_lucius
ENSSTOG00000011790	RRP1B	96	66.533	ENSFCAG00000010272	RRP1B	99	66.353	Felis_catus
ENSSTOG00000011790	RRP1B	53	49.612	ENSFCAG00000008434	RRP1	73	52.353	Felis_catus
ENSSTOG00000011790	RRP1B	88	43.448	ENSFALG00000002024	RRP1B	100	43.688	Ficedula_albicollis
ENSSTOG00000011790	RRP1B	61	44.671	ENSFDAG00000013728	RRP1	73	48.968	Fukomys_damarensis
ENSSTOG00000011790	RRP1B	92	63.776	ENSFDAG00000010899	RRP1B	96	63.928	Fukomys_damarensis
ENSSTOG00000011790	RRP1B	53	51.579	ENSFHEG00000016314	-	50	44.118	Fundulus_heteroclitus
ENSSTOG00000011790	RRP1B	62	44.037	ENSGMOG00000001953	-	64	44.037	Gadus_morhua
ENSSTOG00000011790	RRP1B	96	45.178	ENSGALG00000035696	RRP1B	99	44.330	Gallus_gallus
ENSSTOG00000011790	RRP1B	96	32.941	ENSGACG00000001438	rrp1	72	42.939	Gasterosteus_aculeatus
ENSSTOG00000011790	RRP1B	96	48.129	ENSGAGG00000000375	RRP1B	99	47.327	Gopherus_agassizii
ENSSTOG00000011790	RRP1B	96	71.579	ENSGGOG00000012069	RRP1B	99	70.878	Gorilla_gorilla
ENSSTOG00000011790	RRP1B	96	67.333	ENSHGLG00000004968	RRP1B	99	67.292	Heterocephalus_glaber_female
ENSSTOG00000011790	RRP1B	88	70.141	ENSHGLG00100002232	RRP1B	99	60.162	Heterocephalus_glaber_male
ENSSTOG00000011790	RRP1B	66	42.754	ENSHCOG00000018388	-	59	41.481	Hippocampus_comes
ENSSTOG00000011790	RRP1B	63	43.243	ENSIPUG00000000673	-	66	44.638	Ictalurus_punctatus
ENSSTOG00000011790	RRP1B	96	60.367	ENSJJAG00000021279	Rrp1b	99	60.743	Jaculus_jaculus
ENSSTOG00000011790	RRP1B	60	48.000	ENSKMAG00000005539	rrp1	70	48.000	Kryptolebias_marmoratus
ENSSTOG00000011790	RRP1B	52	51.562	ENSLACG00000017332	-	52	50.260	Latimeria_chalumnae
ENSSTOG00000011790	RRP1B	55	48.507	ENSLAFG00000022901	RRP1	78	51.862	Loxodonta_africana
ENSSTOG00000011790	RRP1B	85	59.644	ENSLAFG00000000766	RRP1B	83	77.119	Loxodonta_africana
ENSSTOG00000011790	RRP1B	96	72.237	ENSMFAG00000039152	RRP1B	99	71.543	Macaca_fascicularis
ENSSTOG00000011790	RRP1B	96	69.737	ENSMMUG00000000104	RRP1B	99	69.016	Macaca_mulatta
ENSSTOG00000011790	RRP1B	96	72.237	ENSMNEG00000034269	RRP1B	99	71.543	Macaca_nemestrina
ENSSTOG00000011790	RRP1B	91	71.967	ENSMLEG00000040044	RRP1B	99	71.548	Mandrillus_leucophaeus
ENSSTOG00000011790	RRP1B	96	65.339	ENSMAUG00000021508	Rrp1b	99	63.710	Mesocricetus_auratus
ENSSTOG00000011790	RRP1B	96	73.580	ENSMICG00000004686	RRP1B	99	72.630	Microcebus_murinus
ENSSTOG00000011790	RRP1B	53	51.020	ENSMICG00000004700	RRP1	76	52.857	Microcebus_murinus
ENSSTOG00000011790	RRP1B	96	64.456	ENSMOCG00000001117	Rrp1b	99	63.038	Microtus_ochrogaster
ENSSTOG00000011790	RRP1B	51	37.808	ENSMMOG00000019175	rrp1	88	38.682	Mola_mola
ENSSTOG00000011790	RRP1B	96	60.288	ENSMODG00000021033	RRP1B	99	59.735	Monodelphis_domestica
ENSSTOG00000011790	RRP1B	51	44.687	ENSMALG00000010310	rrp1	90	45.299	Monopterus_albus
ENSSTOG00000011790	RRP1B	96	62.815	MGP_CAROLIEiJ_G0021376	Rrp1b	99	62.450	Mus_caroli
ENSSTOG00000011790	RRP1B	96	61.955	ENSMUSG00000058392	Rrp1b	99	61.044	Mus_musculus
ENSSTOG00000011790	RRP1B	96	64.980	MGP_PahariEiJ_G0023695	Rrp1b	99	63.563	Mus_pahari
ENSSTOG00000011790	RRP1B	96	62.550	MGP_SPRETEiJ_G0022290	Rrp1b	99	62.517	Mus_spretus
ENSSTOG00000011790	RRP1B	85	60.877	ENSMPUG00000009810	RRP1B	99	61.426	Mustela_putorius_furo
ENSSTOG00000011790	RRP1B	53	45.833	ENSMPUG00000009826	RRP1	79	48.205	Mustela_putorius_furo
ENSSTOG00000011790	RRP1B	96	66.579	ENSMLUG00000007738	RRP1B	99	66.445	Myotis_lucifugus
ENSSTOG00000011790	RRP1B	96	66.400	ENSNGAG00000021073	Rrp1b	99	65.768	Nannospalax_galili
ENSSTOG00000011790	RRP1B	57	36.543	ENSNGAG00000022344	Rrp1	78	39.726	Nannospalax_galili
ENSSTOG00000011790	RRP1B	96	72.320	ENSNLEG00000001490	RRP1B	99	71.605	Nomascus_leucogenys
ENSSTOG00000011790	RRP1B	74	83.193	ENSMEUG00000003226	-	88	82.883	Notamacropus_eugenii
ENSSTOG00000011790	RRP1B	52	44.986	ENSOPRG00000001319	RRP1	94	47.606	Ochotona_princeps
ENSSTOG00000011790	RRP1B	96	61.342	ENSODEG00000013177	RRP1B	99	61.058	Octodon_degus
ENSSTOG00000011790	RRP1B	95	48.353	ENSOANG00000006470	RRP1B	99	48.816	Ornithorhynchus_anatinus
ENSSTOG00000011790	RRP1B	91	55.866	ENSOCUG00000025931	RRP1B	100	53.857	Oryctolagus_cuniculus
ENSSTOG00000011790	RRP1B	67	45.308	ENSORLG00020007199	-	52	52.381	Oryzias_latipes_hni
ENSSTOG00000011790	RRP1B	67	46.113	ENSORLG00015004425	-	56	47.143	Oryzias_latipes_hsok
ENSSTOG00000011790	RRP1B	64	46.341	ENSOMEG00000016910	-	55	46.341	Oryzias_melastigma
ENSSTOG00000011790	RRP1B	94	62.412	ENSOGAG00000009872	RRP1B	91	75.000	Otolemur_garnettii
ENSSTOG00000011790	RRP1B	52	50.132	ENSOGAG00000006105	RRP1	77	51.989	Otolemur_garnettii
ENSSTOG00000011790	RRP1B	91	60.306	ENSOARG00000011314	RRP1B	100	59.720	Ovis_aries
ENSSTOG00000011790	RRP1B	94	69.553	ENSPPAG00000035319	RRP1B	99	70.613	Pan_paniscus
ENSSTOG00000011790	RRP1B	96	65.733	ENSPPRG00000010356	RRP1B	99	65.772	Panthera_pardus
ENSSTOG00000011790	RRP1B	52	49.602	ENSPPRG00000010656	RRP1	74	52.632	Panthera_pardus
ENSSTOG00000011790	RRP1B	82	71.782	ENSPTIG00000016894	RRP1B	89	73.571	Panthera_tigris_altaica
ENSSTOG00000011790	RRP1B	96	71.711	ENSPTRG00000013958	RRP1B	99	71.011	Pan_troglodytes
ENSSTOG00000011790	RRP1B	56	49.015	ENSPANG00000015097	RRP1	72	53.509	Papio_anubis
ENSSTOG00000011790	RRP1B	96	72.632	ENSPANG00000011090	RRP1B	99	71.941	Papio_anubis
ENSSTOG00000011790	RRP1B	96	48.077	ENSPSIG00000008152	RRP1B	94	49.022	Pelodiscus_sinensis
ENSSTOG00000011790	RRP1B	51	35.561	ENSPMGG00000007512	-	85	37.079	Periophthalmus_magnuspinnatus
ENSSTOG00000011790	RRP1B	96	67.065	ENSPEMG00000022490	Rrp1b	99	65.276	Peromyscus_maniculatus_bairdii
ENSSTOG00000011790	RRP1B	59	50.926	ENSPCIG00000015523	-	74	58.284	Phascolarctos_cinereus
ENSSTOG00000011790	RRP1B	96	60.417	ENSPCIG00000015513	RRP1B	99	60.422	Phascolarctos_cinereus
ENSSTOG00000011790	RRP1B	51	42.033	ENSPLAG00000016684	-	50	43.966	Poecilia_latipinna
ENSSTOG00000011790	RRP1B	63	46.154	ENSPMEG00000007042	-	56	46.154	Poecilia_mexicana
ENSSTOG00000011790	RRP1B	63	47.656	ENSPREG00000015673	-	57	47.656	Poecilia_reticulata
ENSSTOG00000011790	RRP1B	96	71.842	ENSPPYG00000011470	RRP1B	99	71.144	Pongo_abelii
ENSSTOG00000011790	RRP1B	82	85.263	ENSPCAG00000013723	RRP1B	91	85.263	Procavia_capensis
ENSSTOG00000011790	RRP1B	53	49.364	ENSPCOG00000017706	RRP1	75	51.714	Propithecus_coquereli
ENSSTOG00000011790	RRP1B	96	73.705	ENSPCOG00000017927	RRP1B	99	73.020	Propithecus_coquereli
ENSSTOG00000011790	RRP1B	96	59.079	ENSPVAG00000001436	RRP1B	99	58.245	Pteropus_vampyrus
ENSSTOG00000011790	RRP1B	96	66.135	ENSRNOG00000001194	Rrp1b	99	64.603	Rattus_norvegicus
ENSSTOG00000011790	RRP1B	96	68.421	ENSRBIG00000041689	RRP1B	99	67.686	Rhinopithecus_bieti
ENSSTOG00000011790	RRP1B	96	72.368	ENSRROG00000031499	RRP1B	99	71.809	Rhinopithecus_roxellana
ENSSTOG00000011790	RRP1B	91	66.532	ENSSBOG00000034727	RRP1B	99	66.532	Saimiri_boliviensis_boliviensis
ENSSTOG00000011790	RRP1B	53	50.781	ENSSBOG00000034689	RRP1	72	52.647	Saimiri_boliviensis_boliviensis
ENSSTOG00000011790	RRP1B	96	60.995	ENSSHAG00000017789	RRP1B	99	60.795	Sarcophilus_harrisii
ENSSTOG00000011790	RRP1B	58	47.107	ENSSFOG00015003932	-	57	47.899	Scleropages_formosus
ENSSTOG00000011790	RRP1B	63	46.094	ENSSMAG00000016847	-	84	43.626	Scophthalmus_maximus
ENSSTOG00000011790	RRP1B	67	45.185	ENSSDUG00000000551	-	51	45.892	Seriola_dumerili
ENSSTOG00000011790	RRP1B	67	45.522	ENSSLDG00000002538	-	51	45.609	Seriola_lalandi_dorsalis
ENSSTOG00000011790	RRP1B	67	64.211	ENSSARG00000003108	-	74	64.211	Sorex_araneus
ENSSTOG00000011790	RRP1B	96	43.678	ENSSPUG00000002834	RRP1B	99	43.590	Sphenodon_punctatus
ENSSTOG00000011790	RRP1B	64	47.656	ENSSPAG00000005370	-	50	47.656	Stegastes_partitus
ENSSTOG00000011790	RRP1B	96	59.254	ENSSSCG00000021698	RRP1B	99	58.950	Sus_scrofa
ENSSTOG00000011790	RRP1B	60	44.681	ENSTNIG00000005053	rrp1	69	44.681	Tetraodon_nigroviridis
ENSSTOG00000011790	RRP1B	74	83.136	ENSTBEG00000000422	RRP1B	100	83.136	Tupaia_belangeri
ENSSTOG00000011790	RRP1B	96	62.616	ENSTTRG00000000723	RRP1B	99	62.115	Tursiops_truncatus
ENSSTOG00000011790	RRP1B	96	67.118	ENSUAMG00000026765	RRP1B	99	66.301	Ursus_americanus
ENSSTOG00000011790	RRP1B	67	78.028	ENSUMAG00000025510	RRP1B	94	78.030	Ursus_maritimus
ENSSTOG00000011790	RRP1B	91	68.195	ENSVVUG00000024509	RRP1B	99	67.330	Vulpes_vulpes
ENSSTOG00000011790	RRP1B	64	47.368	ENSXETG00000013683	rrp1b	70	47.041	Xenopus_tropicalis
ENSSTOG00000011790	RRP1B	59	52.083	ENSXMAG00000023123	-	57	53.125	Xiphophorus_maculatus