EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSTOG00000011819 (Gene tree)
Gene ID: 101961722
Gene Symbol: TSR1
Alias: FLJ10534
Full Name: TSR1%2C ribosome maturation factor
Gene Type: protein_coding
Species: Ictidomys_tridecemlineatus
Status: putative
Strand: Minus strand
Length: 11262 bases
Position: chrJH393348.1:8383784-8395045
Accession: 101961722
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSTOP00000010611	AARP2CN	PF08142.12	2.3e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSTOT00000011830	TSR1-201	2895	XM_005327914	ENSSTOP00000010611	805 (aa)	XP_005327971	I3MI25

Gene Model

Click here to download ENSSTOG00000011819's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSTOG00000011819's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSTOG00000011819	TSR1	100	87.995	ENSG00000167721	TSR1	100	87.624	Homo_sapiens
ENSSTOG00000011819	TSR1	99	55.675	ENSAPOG00000020891	tsr1	99	55.396	Acanthochromis_polyacanthus
ENSSTOG00000011819	TSR1	100	86.855	ENSAMEG00000007599	TSR1	99	86.486	Ailuropoda_melanoleuca
ENSSTOG00000011819	TSR1	99	58.426	ENSACIG00000007090	tsr1	99	57.635	Amphilophus_citrinellus
ENSSTOG00000011819	TSR1	99	55.783	ENSAOCG00000023284	tsr1	99	55.381	Amphiprion_ocellaris
ENSSTOG00000011819	TSR1	94	56.138	ENSAPEG00000008452	tsr1	100	55.712	Amphiprion_percula
ENSSTOG00000011819	TSR1	99	54.022	ENSATEG00000021961	tsr1	99	55.622	Anabas_testudineus
ENSSTOG00000011819	TSR1	92	67.925	ENSAPLG00000013422	TSR1	99	68.329	Anas_platyrhynchos
ENSSTOG00000011819	TSR1	70	57.586	ENSACAG00000000859	TSR1	92	57.069	Anolis_carolinensis
ENSSTOG00000011819	TSR1	100	88.213	ENSANAG00000031071	TSR1	100	87.593	Aotus_nancymaae
ENSSTOG00000011819	TSR1	99	56.506	ENSACLG00000007595	tsr1	99	56.506	Astatotilapia_calliptera
ENSSTOG00000011819	TSR1	50	49.880	ENSAMXG00000008470	tsr1	90	49.306	Astyanax_mexicanus
ENSSTOG00000011819	TSR1	100	89.206	ENSBTAG00000004225	TSR1	100	88.710	Bos_taurus
ENSSTOG00000011819	TSR1	97	38.335	WBGene00006497	tag-151	96	38.665	Caenorhabditis_elegans
ENSSTOG00000011819	TSR1	100	87.965	ENSCJAG00000012456	TSR1	100	87.345	Callithrix_jacchus
ENSSTOG00000011819	TSR1	100	87.965	ENSCAFG00000002106	-	100	87.965	Canis_familiaris
ENSSTOG00000011819	TSR1	90	87.620	ENSCAFG00000019273	-	100	87.842	Canis_familiaris
ENSSTOG00000011819	TSR1	100	87.469	ENSCAFG00020009728	TSR1	100	87.469	Canis_lupus_dingo
ENSSTOG00000011819	TSR1	100	89.826	ENSCHIG00000023935	TSR1	100	89.330	Capra_hircus
ENSSTOG00000011819	TSR1	100	87.469	ENSTSYG00000005468	TSR1	100	87.469	Carlito_syrichta
ENSSTOG00000011819	TSR1	93	88.503	ENSCPOG00000014833	TSR1	99	88.503	Cavia_porcellus
ENSSTOG00000011819	TSR1	93	88.770	ENSCCAG00000028962	TSR1	98	88.102	Cebus_capucinus
ENSSTOG00000011819	TSR1	100	88.614	ENSCATG00000044262	TSR1	100	88.614	Cercocebus_atys
ENSSTOG00000011819	TSR1	100	87.965	ENSCLAG00000005567	TSR1	100	87.469	Chinchilla_lanigera
ENSSTOG00000011819	TSR1	100	88.614	ENSCSAG00000013788	TSR1	100	88.614	Chlorocebus_sabaeus
ENSSTOG00000011819	TSR1	99	69.375	ENSCPBG00000020363	TSR1	97	69.393	Chrysemys_picta_bellii
ENSSTOG00000011819	TSR1	97	46.742	ENSCING00000020658	-	99	46.617	Ciona_intestinalis
ENSSTOG00000011819	TSR1	97	45.283	ENSCSAVG00000001875	-	100	44.444	Ciona_savignyi
ENSSTOG00000011819	TSR1	100	81.988	ENSCANG00000033056	TSR1	100	78.934	Colobus_angolensis_palliatus
ENSSTOG00000011819	TSR1	100	86.087	ENSCGRG00001023942	Tsr1	100	86.087	Cricetulus_griseus_chok1gshd
ENSSTOG00000011819	TSR1	100	79.876	ENSCGRG00000013015	Tsr1	100	81.491	Cricetulus_griseus_crigri
ENSSTOG00000011819	TSR1	99	53.986	ENSCSEG00000013009	tsr1	99	54.909	Cynoglossus_semilaevis
ENSSTOG00000011819	TSR1	99	56.010	ENSCVAG00000000506	tsr1	99	55.772	Cyprinodon_variegatus
ENSSTOG00000011819	TSR1	99	54.808	ENSDARG00000007744	tsr1	99	55.800	Danio_rerio
ENSSTOG00000011819	TSR1	100	87.965	ENSDNOG00000004715	TSR1	100	88.012	Dasypus_novemcinctus
ENSSTOG00000011819	TSR1	97	74.840	ENSDORG00000023234	-	100	74.711	Dipodomys_ordii
ENSSTOG00000011819	TSR1	100	86.211	ENSDORG00000016371	-	100	86.211	Dipodomys_ordii
ENSSTOG00000011819	TSR1	97	43.827	FBgn0037073	Tsr1	96	42.999	Drosophila_melanogaster
ENSSTOG00000011819	TSR1	92	89.836	ENSETEG00000017534	TSR1	91	89.836	Echinops_telfairi
ENSSTOG00000011819	TSR1	95	53.333	ENSEBUG00000013731	TSR1	97	53.133	Eptatretus_burgeri
ENSSTOG00000011819	TSR1	100	89.082	ENSEASG00005009302	TSR1	97	88.586	Equus_asinus_asinus
ENSSTOG00000011819	TSR1	100	89.082	ENSECAG00000009114	TSR1	100	89.082	Equus_caballus
ENSSTOG00000011819	TSR1	99	55.556	ENSELUG00000020984	tsr1	95	56.280	Esox_lucius
ENSSTOG00000011819	TSR1	100	89.330	ENSFCAG00000006313	TSR1	100	89.578	Felis_catus
ENSSTOG00000011819	TSR1	99	70.037	ENSFALG00000006532	TSR1	99	70.037	Ficedula_albicollis
ENSSTOG00000011819	TSR1	100	88.089	ENSFDAG00000006038	TSR1	100	88.089	Fukomys_damarensis
ENSSTOG00000011819	TSR1	99	55.329	ENSFHEG00000003626	tsr1	99	55.529	Fundulus_heteroclitus
ENSSTOG00000011819	TSR1	99	53.244	ENSGMOG00000010336	tsr1	99	54.090	Gadus_morhua
ENSSTOG00000011819	TSR1	99	54.819	ENSGAFG00000012993	tsr1	99	55.139	Gambusia_affinis
ENSSTOG00000011819	TSR1	99	55.501	ENSGACG00000010843	tsr1	99	55.420	Gasterosteus_aculeatus
ENSSTOG00000011819	TSR1	99	69.000	ENSGAGG00000025619	-	99	69.145	Gopherus_agassizii
ENSSTOG00000011819	TSR1	100	88.119	ENSGGOG00000001704	TSR1	100	87.871	Gorilla_gorilla
ENSSTOG00000011819	TSR1	99	56.818	ENSHBUG00000017904	tsr1	100	56.943	Haplochromis_burtoni
ENSSTOG00000011819	TSR1	97	77.949	ENSHGLG00000015688	-	99	76.667	Heterocephalus_glaber_female
ENSSTOG00000011819	TSR1	100	88.337	ENSHGLG00000012806	-	100	87.841	Heterocephalus_glaber_female
ENSSTOG00000011819	TSR1	100	88.337	ENSHGLG00100015392	TSR1	100	87.841	Heterocephalus_glaber_male
ENSSTOG00000011819	TSR1	99	56.984	ENSHCOG00000001432	tsr1	99	56.860	Hippocampus_comes
ENSSTOG00000011819	TSR1	99	54.819	ENSIPUG00000004618	tsr1	99	55.301	Ictalurus_punctatus
ENSSTOG00000011819	TSR1	92	80.676	ENSJJAG00000019505	Tsr1	95	80.244	Jaculus_jaculus
ENSSTOG00000011819	TSR1	99	54.964	ENSKMAG00000005763	tsr1	99	55.918	Kryptolebias_marmoratus
ENSSTOG00000011819	TSR1	99	54.916	ENSLBEG00000021823	tsr1	99	55.596	Labrus_bergylta
ENSSTOG00000011819	TSR1	99	62.958	ENSLACG00000002197	TSR1	99	62.899	Latimeria_chalumnae
ENSSTOG00000011819	TSR1	82	57.228	ENSLOCG00000006491	TSR1	88	57.079	Lepisosteus_oculatus
ENSSTOG00000011819	TSR1	100	88.861	ENSMFAG00000021330	TSR1	100	88.861	Macaca_fascicularis
ENSSTOG00000011819	TSR1	100	88.490	ENSMMUG00000017519	TSR1	100	88.490	Macaca_mulatta
ENSSTOG00000011819	TSR1	100	88.490	ENSMNEG00000031382	TSR1	100	88.490	Macaca_nemestrina
ENSSTOG00000011819	TSR1	100	88.490	ENSMLEG00000036733	TSR1	100	88.490	Mandrillus_leucophaeus
ENSSTOG00000011819	TSR1	99	55.728	ENSMAMG00000017918	tsr1	99	54.970	Mastacembelus_armatus
ENSSTOG00000011819	TSR1	99	56.438	ENSMZEG00005007477	tsr1	99	56.679	Maylandia_zebra
ENSSTOG00000011819	TSR1	99	68.148	ENSMGAG00000005576	TSR1	99	68.519	Meleagris_gallopavo
ENSSTOG00000011819	TSR1	100	89.578	ENSMICG00000012943	TSR1	100	89.826	Microcebus_murinus
ENSSTOG00000011819	TSR1	100	84.864	ENSMOCG00000022764	Tsr1	100	85.378	Microtus_ochrogaster
ENSSTOG00000011819	TSR1	99	56.585	ENSMMOG00000014280	tsr1	99	56.951	Mola_mola
ENSSTOG00000011819	TSR1	100	78.191	ENSMODG00000010658	TSR1	100	78.040	Monodelphis_domestica
ENSSTOG00000011819	TSR1	99	56.062	ENSMALG00000011681	tsr1	99	55.904	Monopterus_albus
ENSSTOG00000011819	TSR1	100	85.732	MGP_CAROLIEiJ_G0016727	Tsr1	100	85.112	Mus_caroli
ENSSTOG00000011819	TSR1	100	86.352	ENSMUSG00000038335	Tsr1	100	85.732	Mus_musculus
ENSSTOG00000011819	TSR1	100	86.228	MGP_PahariEiJ_G0017864	Tsr1	100	85.608	Mus_pahari
ENSSTOG00000011819	TSR1	100	86.228	MGP_SPRETEiJ_G0017570	Tsr1	100	85.608	Mus_spretus
ENSSTOG00000011819	TSR1	82	86.626	ENSMPUG00000013000	TSR1	100	86.626	Mustela_putorius_furo
ENSSTOG00000011819	TSR1	100	90.199	ENSMLUG00000003505	TSR1	100	89.702	Myotis_lucifugus
ENSSTOG00000011819	TSR1	99	55.635	ENSNBRG00000020728	tsr1	99	56.355	Neolamprologus_brichardi
ENSSTOG00000011819	TSR1	100	80.421	ENSNLEG00000017184	TSR1	100	82.857	Nomascus_leucogenys
ENSSTOG00000011819	TSR1	99	72.298	ENSMEUG00000015828	TSR1	99	72.649	Notamacropus_eugenii
ENSSTOG00000011819	TSR1	99	57.298	ENSONIG00000013131	tsr1	99	56.590	Oreochromis_niloticus
ENSSTOG00000011819	TSR1	96	72.657	ENSOANG00000008637	TSR1	100	72.272	Ornithorhynchus_anatinus
ENSSTOG00000011819	TSR1	100	87.965	ENSOCUG00000014256	TSR1	100	88.133	Oryctolagus_cuniculus
ENSSTOG00000011819	TSR1	99	54.688	ENSORLG00000004926	tsr1	99	55.730	Oryzias_latipes
ENSSTOG00000011819	TSR1	99	55.836	ENSORLG00020008792	tsr1	99	55.797	Oryzias_latipes_hni
ENSSTOG00000011819	TSR1	99	54.688	ENSORLG00015013838	tsr1	99	55.730	Oryzias_latipes_hsok
ENSSTOG00000011819	TSR1	99	56.077	ENSOMEG00000004830	tsr1	99	56.438	Oryzias_melastigma
ENSSTOG00000011819	TSR1	100	87.577	ENSOGAG00000004492	TSR1	100	86.962	Otolemur_garnettii
ENSSTOG00000011819	TSR1	100	89.578	ENSOARG00000015437	TSR1	97	89.082	Ovis_aries
ENSSTOG00000011819	TSR1	100	88.119	ENSPPAG00000036355	TSR1	100	87.748	Pan_paniscus
ENSSTOG00000011819	TSR1	100	89.206	ENSPPRG00000015519	-	100	89.330	Panthera_pardus
ENSSTOG00000011819	TSR1	100	89.454	ENSPTIG00000010608	TSR1	100	89.578	Panthera_tigris_altaica
ENSSTOG00000011819	TSR1	100	88.119	ENSPTRG00000008547	TSR1	100	87.748	Pan_troglodytes
ENSSTOG00000011819	TSR1	100	85.272	ENSPANG00000024463	TSR1	100	83.911	Papio_anubis
ENSSTOG00000011819	TSR1	99	55.025	ENSPKIG00000013972	tsr1	99	55.147	Paramormyrops_kingsleyae
ENSSTOG00000011819	TSR1	88	68.644	ENSPSIG00000018258	TSR1	100	68.547	Pelodiscus_sinensis
ENSSTOG00000011819	TSR1	99	57.862	ENSPMGG00000011577	tsr1	99	57.337	Periophthalmus_magnuspinnatus
ENSSTOG00000011819	TSR1	100	85.732	ENSPEMG00000018033	Tsr1	100	85.732	Peromyscus_maniculatus_bairdii
ENSSTOG00000011819	TSR1	100	78.298	ENSPCIG00000009357	TSR1	97	78.668	Phascolarctos_cinereus
ENSSTOG00000011819	TSR1	99	55.596	ENSPFOG00000004483	TSR1	99	56.326	Poecilia_formosa
ENSSTOG00000011819	TSR1	99	55.283	ENSPLAG00000022320	tsr1	99	55.889	Poecilia_latipinna
ENSSTOG00000011819	TSR1	99	55.168	ENSPMEG00000004577	tsr1	99	55.409	Poecilia_mexicana
ENSSTOG00000011819	TSR1	97	55.569	ENSPREG00000010354	tsr1	95	55.253	Poecilia_reticulata
ENSSTOG00000011819	TSR1	100	80.911	ENSPPYG00000007792	TSR1	100	80.911	Pongo_abelii
ENSSTOG00000011819	TSR1	52	90.698	ENSPCAG00000012973	-	71	91.892	Procavia_capensis
ENSSTOG00000011819	TSR1	100	89.193	ENSPCOG00000017928	TSR1	100	89.565	Propithecus_coquereli
ENSSTOG00000011819	TSR1	100	88.337	ENSPVAG00000002162	TSR1	100	87.717	Pteropus_vampyrus
ENSSTOG00000011819	TSR1	99	56.627	ENSPNYG00000016163	tsr1	99	56.627	Pundamilia_nyererei
ENSSTOG00000011819	TSR1	99	54.731	ENSPNAG00000008659	tsr1	99	54.251	Pygocentrus_nattereri
ENSSTOG00000011819	TSR1	100	84.882	ENSRNOG00000002980	Tsr1	100	84.263	Rattus_norvegicus
ENSSTOG00000011819	TSR1	100	88.738	ENSRBIG00000040016	TSR1	100	88.738	Rhinopithecus_bieti
ENSSTOG00000011819	TSR1	100	88.614	ENSRROG00000030361	TSR1	100	88.614	Rhinopithecus_roxellana
ENSSTOG00000011819	TSR1	96	31.103	YDL060W	-	98	30.483	Saccharomyces_cerevisiae
ENSSTOG00000011819	TSR1	100	88.337	ENSSBOG00000020785	TSR1	100	87.965	Saimiri_boliviensis_boliviensis
ENSSTOG00000011819	TSR1	100	76.267	ENSSHAG00000011394	TSR1	100	76.143	Sarcophilus_harrisii
ENSSTOG00000011819	TSR1	99	56.846	ENSSFOG00015005455	tsr1	99	56.601	Scleropages_formosus
ENSSTOG00000011819	TSR1	99	55.675	ENSSMAG00000009504	tsr1	99	56.168	Scophthalmus_maximus
ENSSTOG00000011819	TSR1	99	55.875	ENSSDUG00000012074	tsr1	99	56.558	Seriola_dumerili
ENSSTOG00000011819	TSR1	99	55.928	ENSSLDG00000002031	tsr1	99	56.333	Seriola_lalandi_dorsalis
ENSSTOG00000011819	TSR1	100	74.566	ENSSARG00000000759	TSR1	100	74.069	Sorex_araneus
ENSSTOG00000011819	TSR1	99	68.635	ENSSPUG00000007042	TSR1	99	68.635	Sphenodon_punctatus
ENSSTOG00000011819	TSR1	99	54.480	ENSSPAG00000021951	tsr1	99	55.516	Stegastes_partitus
ENSSTOG00000011819	TSR1	100	89.082	ENSSSCG00000038534	TSR1	100	88.462	Sus_scrofa
ENSSTOG00000011819	TSR1	90	71.096	ENSTGUG00000005883	TSR1	100	71.038	Taeniopygia_guttata
ENSSTOG00000011819	TSR1	99	57.939	ENSTRUG00000004665	tsr1	99	57.664	Takifugu_rubripes
ENSSTOG00000011819	TSR1	99	56.458	ENSTNIG00000016196	tsr1	99	55.843	Tetraodon_nigroviridis
ENSSTOG00000011819	TSR1	67	92.308	ENSTBEG00000015275	-	67	92.308	Tupaia_belangeri
ENSSTOG00000011819	TSR1	100	89.826	ENSTTRG00000001177	TSR1	100	89.082	Tursiops_truncatus
ENSSTOG00000011819	TSR1	100	87.469	ENSUAMG00000025160	TSR1	99	87.469	Ursus_americanus
ENSSTOG00000011819	TSR1	97	86.862	ENSUMAG00000009294	TSR1	99	85.969	Ursus_maritimus
ENSSTOG00000011819	TSR1	84	85.481	ENSVPAG00000000228	TSR1	100	84.593	Vicugna_pacos
ENSSTOG00000011819	TSR1	100	87.717	ENSVVUG00000021767	TSR1	100	87.717	Vulpes_vulpes
ENSSTOG00000011819	TSR1	99	59.681	ENSXETG00000023797	tsr1	100	60.638	Xenopus_tropicalis
ENSSTOG00000011819	TSR1	99	56.005	ENSXCOG00000009635	tsr1	99	56.618	Xiphophorus_couchianus
ENSSTOG00000011819	TSR1	99	54.699	ENSXMAG00000001397	tsr1	96	55.502	Xiphophorus_maculatus