EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSTOG00000012288 (Gene tree)
Gene ID: 101965836
Gene Symbol: -
Alias: -
Full Name: survival motor neuron protein
Gene Type: protein_coding
Species: Ictidomys_tridecemlineatus
Status: putative
Strand: Plus strand
Length: 11678 bases
Position: chrJH393359.1:4968214-4979891
Accession: 101965836
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSTOP00000011013	SMN	PF06003.12	6.9e-101	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSTOT00000012289	-	822	XM_005328968	ENSSTOP00000011013	274 (aa)	XP_013215654	I3MIW3

Gene Model

Click here to download ENSSTOG00000012288's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSTOG00000012288's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSTOG00000012288	-	100	86.738	ENSG00000172062	SMN1	99	86.738	Homo_sapiens
ENSSTOG00000012288	-	100	86.738	ENSG00000205571	SMN2	99	86.738	Homo_sapiens
ENSSTOG00000012288	-	93	51.481	ENSAPOG00000011324	smn1	91	52.075	Acanthochromis_polyacanthus
ENSSTOG00000012288	-	96	91.353	ENSAMEG00000003316	-	88	91.288	Ailuropoda_melanoleuca
ENSSTOG00000012288	-	93	51.527	ENSACIG00000019772	-	97	50.000	Amphilophus_citrinellus
ENSSTOG00000012288	-	93	51.698	ENSAOCG00000024444	smn1	91	52.453	Amphiprion_ocellaris
ENSSTOG00000012288	-	93	52.222	ENSAPEG00000016504	smn1	91	52.830	Amphiprion_percula
ENSSTOG00000012288	-	93	52.963	ENSATEG00000002182	smn1	79	53.640	Anabas_testudineus
ENSSTOG00000012288	-	68	52.941	ENSAPLG00000010912	-	92	57.219	Anas_platyrhynchos
ENSSTOG00000012288	-	93	54.962	ENSACAG00000010017	-	89	58.935	Anolis_carolinensis
ENSSTOG00000012288	-	100	79.715	ENSANAG00000032133	-	95	85.409	Aotus_nancymaae
ENSSTOG00000012288	-	93	55.094	ENSACLG00000007308	smn1	88	52.632	Astatotilapia_calliptera
ENSSTOG00000012288	-	52	55.634	ENSAMXG00000013884	smn1	92	49.811	Astyanax_mexicanus
ENSSTOG00000012288	-	96	85.393	ENSBTAG00000005743	SMN2	92	85.660	Bos_taurus
ENSSTOG00000012288	-	100	86.429	ENSCJAG00000016290	-	95	86.429	Callithrix_jacchus
ENSSTOG00000012288	-	96	89.474	ENSCAFG00000007812	SMN	91	89.773	Canis_familiaris
ENSSTOG00000012288	-	96	89.474	ENSCAFG00020019229	-	85	89.773	Canis_lupus_dingo
ENSSTOG00000012288	-	96	85.502	ENSCHIG00000015559	-	90	85.768	Capra_hircus
ENSSTOG00000012288	-	100	87.726	ENSTSYG00000012058	-	92	89.394	Carlito_syrichta
ENSSTOG00000012288	-	78	72.350	ENSCAPG00000011021	-	100	70.485	Cavia_aperea
ENSSTOG00000012288	-	100	83.813	ENSCPOG00000036973	-	95	83.094	Cavia_porcellus
ENSSTOG00000012288	-	100	83.039	ENSCPOG00000012328	-	94	82.332	Cavia_porcellus
ENSSTOG00000012288	-	100	86.331	ENSCCAG00000018127	-	95	86.331	Cebus_capucinus
ENSSTOG00000012288	-	100	87.455	ENSCATG00000037002	-	99	87.455	Cercocebus_atys
ENSSTOG00000012288	-	100	80.142	ENSCLAG00000000284	-	95	80.142	Chinchilla_lanigera
ENSSTOG00000012288	-	100	87.455	ENSCSAG00000015688	-	95	87.455	Chlorocebus_sabaeus
ENSSTOG00000012288	-	90	76.587	ENSCHOG00000007346	-	100	72.619	Choloepus_hoffmanni
ENSSTOG00000012288	-	100	58.214	ENSCPBG00000010968	-	93	61.660	Chrysemys_picta_bellii
ENSSTOG00000012288	-	100	88.087	ENSCANG00000038242	-	100	88.087	Colobus_angolensis_palliatus
ENSSTOG00000012288	-	100	81.071	ENSCANG00000033324	-	95	81.071	Colobus_angolensis_palliatus
ENSSTOG00000012288	-	100	85.870	ENSCGRG00001017959	-	91	87.452	Cricetulus_griseus_chok1gshd
ENSSTOG00000012288	-	100	65.091	ENSCGRG00001016998	-	89	66.412	Cricetulus_griseus_chok1gshd
ENSSTOG00000012288	-	100	85.870	ENSCGRG00000007698	Smn1	91	87.452	Cricetulus_griseus_crigri
ENSSTOG00000012288	-	94	46.403	ENSCSEG00000015227	smn1	94	49.815	Cynoglossus_semilaevis
ENSSTOG00000012288	-	94	51.673	ENSCVAG00000007498	smn1	91	52.060	Cyprinodon_variegatus
ENSSTOG00000012288	-	94	50.965	ENSDARG00000018494	smn1	92	49.446	Danio_rerio
ENSSTOG00000012288	-	81	86.726	ENSDNOG00000007283	-	94	86.726	Dasypus_novemcinctus
ENSSTOG00000012288	-	84	73.362	ENSDNOG00000045949	-	92	75.463	Dasypus_novemcinctus
ENSSTOG00000012288	-	100	80.727	ENSDORG00000007082	Smn1	97	80.727	Dipodomys_ordii
ENSSTOG00000012288	-	76	70.476	ENSETEG00000001406	-	88	69.231	Echinops_telfairi
ENSSTOG00000012288	-	95	36.054	ENSEBUG00000011902	smn1	50	46.528	Eptatretus_burgeri
ENSSTOG00000012288	-	100	77.936	ENSEASG00005018000	-	89	84.127	Equus_asinus_asinus
ENSSTOG00000012288	-	96	87.640	ENSECAG00000015215	-	91	87.970	Equus_caballus
ENSSTOG00000012288	-	90	81.600	ENSEEUG00000015777	-	100	77.912	Erinaceus_europaeus
ENSSTOG00000012288	-	93	55.849	ENSELUG00000018067	smn1	91	51.331	Esox_lucius
ENSSTOG00000012288	-	100	87.410	ENSFCAG00000028292	SMN	91	88.302	Felis_catus
ENSSTOG00000012288	-	91	62.698	ENSFALG00000012320	-	88	61.753	Ficedula_albicollis
ENSSTOG00000012288	-	100	81.560	ENSFDAG00000017683	-	95	81.560	Fukomys_damarensis
ENSSTOG00000012288	-	66	53.005	ENSFHEG00000018508	smn1	93	50.566	Fundulus_heteroclitus
ENSSTOG00000012288	-	96	48.699	ENSGMOG00000017279	smn1	90	46.442	Gadus_morhua
ENSSTOG00000012288	-	93	57.529	ENSGALG00000002430	SMN	92	59.459	Gallus_gallus
ENSSTOG00000012288	-	93	52.075	ENSGAFG00000009501	smn1	91	50.379	Gambusia_affinis
ENSSTOG00000012288	-	93	53.282	ENSGACG00000010584	smn1	88	51.562	Gasterosteus_aculeatus
ENSSTOG00000012288	-	94	58.935	ENSGAGG00000011374	-	91	61.364	Gopherus_agassizii
ENSSTOG00000012288	-	93	37.629	ENSGAGG00000013639	-	57	48.571	Gopherus_agassizii
ENSSTOG00000012288	-	70	84.615	ENSGGOG00000026704	-	91	84.615	Gorilla_gorilla
ENSSTOG00000012288	-	100	73.551	ENSGGOG00000003872	-	100	73.188	Gorilla_gorilla
ENSSTOG00000012288	-	93	53.640	ENSHBUG00000013987	smn1	91	53.008	Haplochromis_burtoni
ENSSTOG00000012288	-	100	81.786	ENSHGLG00000001018	-	90	83.521	Heterocephalus_glaber_female
ENSSTOG00000012288	-	100	79.422	ENSHGLG00000001905	-	95	79.422	Heterocephalus_glaber_female
ENSSTOG00000012288	-	100	79.422	ENSHGLG00100018676	-	99	79.422	Heterocephalus_glaber_male
ENSSTOG00000012288	-	100	81.786	ENSHGLG00100011252	-	90	83.521	Heterocephalus_glaber_male
ENSSTOG00000012288	-	93	52.075	ENSHCOG00000017136	smn1	87	50.951	Hippocampus_comes
ENSSTOG00000012288	-	93	51.145	ENSIPUG00000012580	smn1	81	50.584	Ictalurus_punctatus
ENSSTOG00000012288	-	63	66.857	ENSJJAG00000014853	-	89	66.857	Jaculus_jaculus
ENSSTOG00000012288	-	93	49.819	ENSKMAG00000007239	smn1	93	50.598	Kryptolebias_marmoratus
ENSSTOG00000012288	-	93	51.493	ENSLBEG00000022550	smn1	91	53.030	Labrus_bergylta
ENSSTOG00000012288	-	95	34.173	ENSLACG00000009808	-	88	35.926	Latimeria_chalumnae
ENSSTOG00000012288	-	93	51.724	ENSLOCG00000011339	smn1	91	53.640	Lepisosteus_oculatus
ENSSTOG00000012288	-	100	86.477	ENSLAFG00000003425	-	88	87.313	Loxodonta_africana
ENSSTOG00000012288	-	100	82.796	ENSMFAG00000008812	-	95	82.796	Macaca_fascicularis
ENSSTOG00000012288	-	100	87.814	ENSMFAG00000031523	SMN1	99	87.814	Macaca_fascicularis
ENSSTOG00000012288	-	100	82.079	ENSMMUG00000030594	-	95	82.079	Macaca_mulatta
ENSSTOG00000012288	-	100	87.814	ENSMMUG00000020214	SMN1	99	87.814	Macaca_mulatta
ENSSTOG00000012288	-	100	87.814	ENSMNEG00000035094	-	99	87.814	Macaca_nemestrina
ENSSTOG00000012288	-	74	74.038	ENSMNEG00000036423	-	81	74.038	Macaca_nemestrina
ENSSTOG00000012288	-	100	87.814	ENSMLEG00000041902	-	99	87.814	Mandrillus_leucophaeus
ENSSTOG00000012288	-	93	52.290	ENSMAMG00000011034	smn1	91	51.321	Mastacembelus_armatus
ENSSTOG00000012288	-	93	53.640	ENSMZEG00005013634	smn1	91	52.632	Maylandia_zebra
ENSSTOG00000012288	-	68	58.289	ENSMGAG00000008889	-	90	56.150	Meleagris_gallopavo
ENSSTOG00000012288	-	100	78.986	ENSMAUG00000010262	Smn1	91	85.932	Mesocricetus_auratus
ENSSTOG00000012288	-	87	86.066	ENSMICG00000034708	-	86	87.783	Microcebus_murinus
ENSSTOG00000012288	-	100	83.696	ENSMOCG00000017833	Smn1	91	85.171	Microtus_ochrogaster
ENSSTOG00000012288	-	94	48.485	ENSMMOG00000005504	smn1	93	49.813	Mola_mola
ENSSTOG00000012288	-	100	64.388	ENSMODG00000001436	-	90	69.925	Monodelphis_domestica
ENSSTOG00000012288	-	93	51.145	ENSMALG00000008025	smn1	91	51.698	Monopterus_albus
ENSSTOG00000012288	-	100	84.838	MGP_CAROLIEiJ_G0018836	Smn1	91	86.742	Mus_caroli
ENSSTOG00000012288	-	100	84.477	ENSMUSG00000021645	Smn1	91	86.364	Mus_musculus
ENSSTOG00000012288	-	100	82.182	MGP_PahariEiJ_G0015911	Smn1	91	83.588	Mus_pahari
ENSSTOG00000012288	-	100	84.116	MGP_SPRETEiJ_G0019718	Smn1	91	85.985	Mus_spretus
ENSSTOG00000012288	-	100	90.647	ENSMPUG00000014470	-	94	91.698	Mustela_putorius_furo
ENSSTOG00000012288	-	96	87.956	ENSMLUG00000010603	-	87	88.235	Myotis_lucifugus
ENSSTOG00000012288	-	100	85.252	ENSNGAG00000019833	Smn1	91	87.170	Nannospalax_galili
ENSSTOG00000012288	-	93	55.682	ENSNBRG00000023000	smn1	91	55.303	Neolamprologus_brichardi
ENSSTOG00000012288	-	100	86.738	ENSNLEG00000004454	-	99	86.738	Nomascus_leucogenys
ENSSTOG00000012288	-	81	60.177	ENSMEUG00000011393	-	99	65.639	Notamacropus_eugenii
ENSSTOG00000012288	-	90	80.237	ENSOPRG00000002015	-	100	81.423	Ochotona_princeps
ENSSTOG00000012288	-	100	84.173	ENSODEG00000015976	-	97	83.039	Octodon_degus
ENSSTOG00000012288	-	94	55.263	ENSONIG00000011799	smn1	92	54.887	Oreochromis_niloticus
ENSSTOG00000012288	-	93	64.368	ENSOANG00000001626	-	91	65.517	Ornithorhynchus_anatinus
ENSSTOG00000012288	-	100	87.004	ENSOCUG00000017097	-	90	87.879	Oryctolagus_cuniculus
ENSSTOG00000012288	-	100	79.078	ENSOCUG00000025183	-	90	80.669	Oryctolagus_cuniculus
ENSSTOG00000012288	-	100	80.851	ENSOCUG00000026649	-	91	85.874	Oryctolagus_cuniculus
ENSSTOG00000012288	-	56	59.740	ENSORLG00000010552	smn1	91	51.341	Oryzias_latipes
ENSSTOG00000012288	-	93	52.344	ENSORLG00020007936	smn1	90	50.965	Oryzias_latipes_hni
ENSSTOG00000012288	-	56	59.740	ENSORLG00015022425	smn1	91	50.951	Oryzias_latipes_hsok
ENSSTOG00000012288	-	93	50.189	ENSOMEG00000007824	smn1	91	51.282	Oryzias_melastigma
ENSSTOG00000012288	-	96	78.676	ENSOGAG00000031414	-	93	78.519	Otolemur_garnettii
ENSSTOG00000012288	-	93	83.846	ENSOARG00000005425	-	95	83.846	Ovis_aries
ENSSTOG00000012288	-	100	86.380	ENSPPAG00000036640	-	99	86.380	Pan_paniscus
ENSSTOG00000012288	-	100	87.770	ENSPPRG00000005575	-	91	88.679	Panthera_pardus
ENSSTOG00000012288	-	100	87.455	ENSPTIG00000007745	-	91	88.346	Panthera_tigris_altaica
ENSSTOG00000012288	-	100	85.816	ENSPTRG00000016955	-	99	85.816	Pan_troglodytes
ENSSTOG00000012288	-	100	83.154	ENSPANG00000000253	-	94	83.513	Papio_anubis
ENSSTOG00000012288	-	100	87.814	ENSPANG00000013601	-	95	87.814	Papio_anubis
ENSSTOG00000012288	-	93	51.119	ENSPKIG00000011096	smn1	91	51.953	Paramormyrops_kingsleyae
ENSSTOG00000012288	-	93	56.929	ENSPSIG00000014787	-	84	57.519	Pelodiscus_sinensis
ENSSTOG00000012288	-	93	47.794	ENSPMGG00000012285	smn1	94	49.615	Periophthalmus_magnuspinnatus
ENSSTOG00000012288	-	91	41.797	ENSPMAG00000005004	smn1	88	40.769	Petromyzon_marinus
ENSSTOG00000012288	-	99	64.493	ENSPCIG00000025764	-	92	69.925	Phascolarctos_cinereus
ENSSTOG00000012288	-	93	52.075	ENSPFOG00000007786	smn1	91	51.154	Poecilia_formosa
ENSSTOG00000012288	-	93	52.453	ENSPLAG00000012071	smn1	91	51.538	Poecilia_latipinna
ENSSTOG00000012288	-	93	52.075	ENSPMEG00000017085	smn1	91	51.154	Poecilia_mexicana
ENSSTOG00000012288	-	93	53.208	ENSPREG00000005824	smn1	91	51.515	Poecilia_reticulata
ENSSTOG00000012288	-	91	86.220	ENSPPYG00000015533	-	92	86.220	Pongo_abelii
ENSSTOG00000012288	-	90	58.871	ENSPPYG00000019189	-	74	76.712	Pongo_abelii
ENSSTOG00000012288	-	90	81.569	ENSPCAG00000004187	-	94	81.569	Procavia_capensis
ENSSTOG00000012288	-	72	85.294	ENSPCOG00000022307	-	90	85.366	Propithecus_coquereli
ENSSTOG00000012288	-	100	89.892	ENSPVAG00000005977	-	95	89.892	Pteropus_vampyrus
ENSSTOG00000012288	-	93	55.682	ENSPNYG00000014148	smn1	91	55.303	Pundamilia_nyererei
ENSSTOG00000012288	-	94	47.126	ENSPNAG00000014007	smn1	80	48.327	Pygocentrus_nattereri
ENSSTOG00000012288	-	100	82.609	ENSRNOG00000018067	Smn1	91	84.030	Rattus_norvegicus
ENSSTOG00000012288	-	100	87.455	ENSRBIG00000037052	-	95	87.455	Rhinopithecus_bieti
ENSSTOG00000012288	-	100	72.563	ENSRBIG00000036775	-	94	73.118	Rhinopithecus_bieti
ENSSTOG00000012288	-	100	70.758	ENSRROG00000031088	-	97	70.036	Rhinopithecus_roxellana
ENSSTOG00000012288	-	100	87.455	ENSRROG00000039399	-	99	87.455	Rhinopithecus_roxellana
ENSSTOG00000012288	-	87	81.275	ENSSBOG00000020112	-	87	81.673	Saimiri_boliviensis_boliviensis
ENSSTOG00000012288	-	100	85.921	ENSSBOG00000011665	-	93	86.813	Saimiri_boliviensis_boliviensis
ENSSTOG00000012288	-	100	64.029	ENSSHAG00000001499	-	91	69.170	Sarcophilus_harrisii
ENSSTOG00000012288	-	93	51.538	ENSSFOG00015015507	smn1	91	49.805	Scleropages_formosus
ENSSTOG00000012288	-	93	50.763	ENSSMAG00000007922	smn1	91	51.136	Scophthalmus_maximus
ENSSTOG00000012288	-	93	50.752	ENSSDUG00000018533	smn1	91	50.379	Seriola_dumerili
ENSSTOG00000012288	-	93	51.128	ENSSLDG00000021135	smn1	91	50.758	Seriola_lalandi_dorsalis
ENSSTOG00000012288	-	93	62.934	ENSSPUG00000000373	-	90	63.462	Sphenodon_punctatus
ENSSTOG00000012288	-	93	50.943	ENSSPAG00000004345	smn1	91	52.075	Stegastes_partitus
ENSSTOG00000012288	-	96	63.774	ENSSSCG00000029127	-	88	65.779	Sus_scrofa
ENSSTOG00000012288	-	100	87.410	ENSSSCG00000016970	-	95	89.568	Sus_scrofa
ENSSTOG00000012288	-	71	53.846	ENSSSCG00000033865	-	87	55.500	Sus_scrofa
ENSSTOG00000012288	-	99	59.075	ENSTGUG00000001548	-	96	60.902	Taeniopygia_guttata
ENSSTOG00000012288	-	60	53.801	ENSTRUG00000000736	smn	92	47.925	Takifugu_rubripes
ENSSTOG00000012288	-	94	47.955	ENSTNIG00000009892	smn1	92	46.840	Tetraodon_nigroviridis
ENSSTOG00000012288	-	66	87.500	ENSTBEG00000002399	-	88	87.912	Tupaia_belangeri
ENSSTOG00000012288	-	96	86.466	ENSTTRG00000005080	-	90	87.500	Tursiops_truncatus
ENSSTOG00000012288	-	66	89.130	ENSUAMG00000024947	-	67	89.011	Ursus_americanus
ENSSTOG00000012288	-	96	92.105	ENSUMAG00000007842	-	68	92.045	Ursus_maritimus
ENSSTOG00000012288	-	96	75.940	ENSVPAG00000009887	-	95	75.758	Vicugna_pacos
ENSSTOG00000012288	-	96	89.474	ENSVVUG00000006934	-	91	89.773	Vulpes_vulpes
ENSSTOG00000012288	-	95	56.877	ENSXETG00000018189	smn2	90	56.506	Xenopus_tropicalis
ENSSTOG00000012288	-	89	35.741	ENSXETG00000004912	-	79	61.905	Xenopus_tropicalis
ENSSTOG00000012288	-	94	52.434	ENSXMAG00000001521	smn1	92	51.119	Xiphophorus_maculatus