EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSTOG00000012346 (Gene tree)
Gene ID: 101959132
Gene Symbol: C1D
Alias: LRP1|Rrp47|SUN-CoR|SUNCOR
Full Name: C1D nuclear receptor corepressor
Gene Type: protein_coding
Species: Ictidomys_tridecemlineatus
Status: putative
Strand: Minus strand
Length: 18238 bases
Position: chrJH393301.1:12515854-12534091
Accession: 101959132
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSTOP00000011066	Sas10_Utp3	PF04000.15	2.9e-17	1	1
ENSSTOP00000027382	Sas10_Utp3	PF04000.15	2.9e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSTOT00000037077	C1D-201	3087	XM_005322086	ENSSTOP00000027382	141 (aa)	XP_005322143	I3MIZ6
ENSSTOT00000012348	C1D-202	3003	XM_013357167	ENSSTOP00000011066	141 (aa)	XP_013212621	I3MIZ6

Gene Model

Click here to download ENSSTOG00000012346's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSTOG00000012346's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSTOG00000012346	C1D	100	97.163	ENSG00000197223	C1D	100	97.163	Homo_sapiens
ENSSTOG00000012346	C1D	99	61.806	ENSAPOG00000005466	c1d	97	61.806	Acanthochromis_polyacanthus
ENSSTOG00000012346	C1D	98	98.551	ENSAMEG00000004859	C1D	95	98.551	Ailuropoda_melanoleuca
ENSSTOG00000012346	C1D	94	65.152	ENSACIG00000012684	c1d	86	65.152	Amphilophus_citrinellus
ENSSTOG00000012346	C1D	97	60.584	ENSAOCG00000020354	c1d	93	60.584	Amphiprion_ocellaris
ENSSTOG00000012346	C1D	94	64.662	ENSAPEG00000001403	c1d	86	64.662	Amphiprion_percula
ENSSTOG00000012346	C1D	96	64.964	ENSATEG00000012922	c1d	88	64.964	Anabas_testudineus
ENSSTOG00000012346	C1D	99	74.648	ENSAPLG00000009320	C1D	98	74.648	Anas_platyrhynchos
ENSSTOG00000012346	C1D	87	81.967	ENSACAG00000001337	C1D	100	81.967	Anolis_carolinensis
ENSSTOG00000012346	C1D	100	93.617	ENSANAG00000005773	-	100	93.617	Aotus_nancymaae
ENSSTOG00000012346	C1D	100	97.163	ENSANAG00000035972	-	100	97.163	Aotus_nancymaae
ENSSTOG00000012346	C1D	87	66.393	ENSACLG00000026206	c1d	89	63.910	Astatotilapia_calliptera
ENSSTOG00000012346	C1D	99	62.238	ENSAMXG00000043212	c1d	98	62.238	Astyanax_mexicanus
ENSSTOG00000012346	C1D	100	97.163	ENSBTAG00000049002	C1D	100	97.163	Bos_taurus
ENSSTOG00000012346	C1D	83	88.889	ENSCJAG00000044668	-	91	88.889	Callithrix_jacchus
ENSSTOG00000012346	C1D	100	97.872	ENSCJAG00000006589	C1D	93	97.163	Callithrix_jacchus
ENSSTOG00000012346	C1D	100	96.454	ENSCAFG00000030099	C1D	100	96.454	Canis_familiaris
ENSSTOG00000012346	C1D	100	96.454	ENSCAFG00020026997	C1D	100	96.454	Canis_lupus_dingo
ENSSTOG00000012346	C1D	100	96.454	ENSCHIG00000025729	C1D	100	96.454	Capra_hircus
ENSSTOG00000012346	C1D	100	97.163	ENSTSYG00000035739	-	100	97.163	Carlito_syrichta
ENSSTOG00000012346	C1D	99	87.857	ENSTSYG00000026573	-	85	87.857	Carlito_syrichta
ENSSTOG00000012346	C1D	100	73.050	ENSCAPG00000011523	-	100	73.050	Cavia_aperea
ENSSTOG00000012346	C1D	100	92.908	ENSCPOG00000037986	-	100	92.908	Cavia_porcellus
ENSSTOG00000012346	C1D	100	73.759	ENSCPOG00000020112	-	100	73.759	Cavia_porcellus
ENSSTOG00000012346	C1D	100	97.872	ENSCCAG00000030405	-	100	97.872	Cebus_capucinus
ENSSTOG00000012346	C1D	100	97.163	ENSCATG00000045336	C1D	100	97.163	Cercocebus_atys
ENSSTOG00000012346	C1D	100	95.035	ENSCATG00000043348	-	100	95.035	Cercocebus_atys
ENSSTOG00000012346	C1D	100	94.326	ENSCLAG00000011883	C1D	100	94.326	Chinchilla_lanigera
ENSSTOG00000012346	C1D	100	97.163	ENSCSAG00000014811	C1D	100	97.163	Chlorocebus_sabaeus
ENSSTOG00000012346	C1D	100	97.163	ENSCHOG00000006719	C1D	79	97.163	Choloepus_hoffmanni
ENSSTOG00000012346	C1D	99	78.723	ENSCPBG00000014451	C1D	95	78.723	Chrysemys_picta_bellii
ENSSTOG00000012346	C1D	84	42.373	ENSCING00000020906	-	62	42.017	Ciona_intestinalis
ENSSTOG00000012346	C1D	83	47.009	ENSCSAVG00000000150	-	67	47.009	Ciona_savignyi
ENSSTOG00000012346	C1D	87	85.366	ENSCANG00000036599	-	100	85.366	Colobus_angolensis_palliatus
ENSSTOG00000012346	C1D	100	96.454	ENSCANG00000035564	C1D	100	96.454	Colobus_angolensis_palliatus
ENSSTOG00000012346	C1D	100	90.071	ENSCGRG00001023376	C1d	100	90.071	Cricetulus_griseus_chok1gshd
ENSSTOG00000012346	C1D	100	90.071	ENSCGRG00000010245	C1d	100	90.071	Cricetulus_griseus_crigri
ENSSTOG00000012346	C1D	99	57.857	ENSCSEG00000000587	c1d	98	57.857	Cynoglossus_semilaevis
ENSSTOG00000012346	C1D	93	63.359	ENSCVAG00000004603	c1d	87	63.359	Cyprinodon_variegatus
ENSSTOG00000012346	C1D	87	65.854	ENSDARG00000021112	c1d	96	60.563	Danio_rerio
ENSSTOG00000012346	C1D	100	88.652	ENSDNOG00000046068	-	100	88.652	Dasypus_novemcinctus
ENSSTOG00000012346	C1D	100	92.908	ENSDORG00000003300	C1d	100	92.908	Dipodomys_ordii
ENSSTOG00000012346	C1D	67	91.579	ENSETEG00000014857	C1D	100	91.579	Echinops_telfairi
ENSSTOG00000012346	C1D	89	56.800	ENSEBUG00000006874	c1d	79	56.800	Eptatretus_burgeri
ENSSTOG00000012346	C1D	100	97.872	ENSEASG00005007307	C1D	92	97.872	Equus_asinus_asinus
ENSSTOG00000012346	C1D	99	98.561	ENSECAG00000002187	C1D	99	98.551	Equus_caballus
ENSSTOG00000012346	C1D	95	66.418	ENSELUG00000014823	c1d	91	66.418	Esox_lucius
ENSSTOG00000012346	C1D	100	97.872	ENSFCAG00000028933	C1D	100	97.872	Felis_catus
ENSSTOG00000012346	C1D	93	81.955	ENSFALG00000013640	C1D	81	81.955	Ficedula_albicollis
ENSSTOG00000012346	C1D	100	95.035	ENSFDAG00000010462	-	100	95.035	Fukomys_damarensis
ENSSTOG00000012346	C1D	100	74.648	ENSFDAG00000014175	-	100	74.648	Fukomys_damarensis
ENSSTOG00000012346	C1D	94	65.414	ENSFHEG00000010545	c1d	92	65.414	Fundulus_heteroclitus
ENSSTOG00000012346	C1D	83	64.957	ENSGMOG00000013911	-	93	64.957	Gadus_morhua
ENSSTOG00000012346	C1D	89	81.890	ENSGALG00000008765	C1D	88	81.890	Gallus_gallus
ENSSTOG00000012346	C1D	92	64.615	ENSGAFG00000012578	c1d	83	64.615	Gambusia_affinis
ENSSTOG00000012346	C1D	89	63.200	ENSGACG00000011981	c1d	98	63.200	Gasterosteus_aculeatus
ENSSTOG00000012346	C1D	91	80.000	ENSGAGG00000013383	C1D	95	75.887	Gopherus_agassizii
ENSSTOG00000012346	C1D	100	98.582	ENSGGOG00000025982	-	78	98.582	Gorilla_gorilla
ENSSTOG00000012346	C1D	100	90.071	ENSGGOG00000025808	-	80	90.071	Gorilla_gorilla
ENSSTOG00000012346	C1D	100	95.745	ENSGGOG00000022296	-	100	95.745	Gorilla_gorilla
ENSSTOG00000012346	C1D	82	67.241	ENSHBUG00000018531	c1d	76	64.567	Haplochromis_burtoni
ENSSTOG00000012346	C1D	100	83.688	ENSHGLG00000021219	-	100	83.688	Heterocephalus_glaber_female
ENSSTOG00000012346	C1D	92	95.385	ENSHGLG00000012332	-	99	93.571	Heterocephalus_glaber_female
ENSSTOG00000012346	C1D	100	84.397	ENSHGLG00100019951	-	100	84.397	Heterocephalus_glaber_male
ENSSTOG00000012346	C1D	100	92.199	ENSHGLG00100000221	-	100	92.199	Heterocephalus_glaber_male
ENSSTOG00000012346	C1D	94	62.687	ENSHCOG00000014589	c1d	91	62.687	Hippocampus_comes
ENSSTOG00000012346	C1D	94	62.687	ENSHCOG00000014568	C1D	91	62.687	Hippocampus_comes
ENSSTOG00000012346	C1D	92	61.654	ENSIPUG00000018661	c1d	92	61.654	Ictalurus_punctatus
ENSSTOG00000012346	C1D	98	73.913	ENSJJAG00000016086	-	100	73.913	Jaculus_jaculus
ENSSTOG00000012346	C1D	89	80.000	ENSJJAG00000023186	-	99	80.000	Jaculus_jaculus
ENSSTOG00000012346	C1D	98	82.609	ENSJJAG00000005044	-	100	82.609	Jaculus_jaculus
ENSSTOG00000012346	C1D	98	81.884	ENSJJAG00000009540	-	100	81.884	Jaculus_jaculus
ENSSTOG00000012346	C1D	96	65.441	ENSKMAG00000015077	c1d	88	65.441	Kryptolebias_marmoratus
ENSSTOG00000012346	C1D	99	62.143	ENSLBEG00000008351	c1d	88	62.143	Labrus_bergylta
ENSSTOG00000012346	C1D	93	77.273	ENSLACG00000007516	C1D	89	77.273	Latimeria_chalumnae
ENSSTOG00000012346	C1D	100	66.901	ENSLOCG00000016024	c1d	96	66.901	Lepisosteus_oculatus
ENSSTOG00000012346	C1D	100	95.745	ENSLAFG00000002083	C1D	100	95.745	Loxodonta_africana
ENSSTOG00000012346	C1D	100	97.163	ENSMFAG00000034261	C1D	100	97.163	Macaca_fascicularis
ENSSTOG00000012346	C1D	100	94.326	ENSMFAG00000034034	-	100	94.326	Macaca_fascicularis
ENSSTOG00000012346	C1D	100	95.745	ENSMFAG00000028681	-	100	95.745	Macaca_fascicularis
ENSSTOG00000012346	C1D	100	95.035	ENSMMUG00000017209	-	100	95.035	Macaca_mulatta
ENSSTOG00000012346	C1D	100	93.617	ENSMMUG00000043184	-	100	93.617	Macaca_mulatta
ENSSTOG00000012346	C1D	98	98.551	ENSMMUG00000041557	C1D	99	98.551	Macaca_mulatta
ENSSTOG00000012346	C1D	100	97.163	ENSMNEG00000040612	C1D	100	97.163	Macaca_nemestrina
ENSSTOG00000012346	C1D	100	93.617	ENSMNEG00000020626	-	100	93.617	Macaca_nemestrina
ENSSTOG00000012346	C1D	100	97.163	ENSMLEG00000027619	C1D	100	97.163	Mandrillus_leucophaeus
ENSSTOG00000012346	C1D	100	95.035	ENSMLEG00000028412	-	100	95.035	Mandrillus_leucophaeus
ENSSTOG00000012346	C1D	91	64.844	ENSMAMG00000022156	c1d	90	64.748	Mastacembelus_armatus
ENSSTOG00000012346	C1D	82	67.241	ENSMZEG00005027343	c1d	87	64.567	Maylandia_zebra
ENSSTOG00000012346	C1D	99	76.429	ENSMGAG00000004517	C1D	99	76.429	Meleagris_gallopavo
ENSSTOG00000012346	C1D	100	89.362	ENSMAUG00000008974	C1d	100	89.362	Mesocricetus_auratus
ENSSTOG00000012346	C1D	100	95.745	ENSMICG00000032141	C1D	100	95.745	Microcebus_murinus
ENSSTOG00000012346	C1D	100	90.071	ENSMOCG00000010860	C1d	100	90.071	Microtus_ochrogaster
ENSSTOG00000012346	C1D	94	65.909	ENSMMOG00000007332	c1d	85	65.909	Mola_mola
ENSSTOG00000012346	C1D	99	82.270	ENSMODG00000003561	C1D	99	82.270	Monodelphis_domestica
ENSSTOG00000012346	C1D	94	63.636	ENSMALG00000020864	c1d	95	64.800	Monopterus_albus
ENSSTOG00000012346	C1D	100	88.652	MGP_CAROLIEiJ_G0016110	C1d	100	91.525	Mus_caroli
ENSSTOG00000012346	C1D	100	88.652	ENSMUSG00000000581	C1d	100	91.525	Mus_musculus
ENSSTOG00000012346	C1D	100	89.362	MGP_PahariEiJ_G0016781	C1d	100	92.373	Mus_pahari
ENSSTOG00000012346	C1D	100	88.652	MGP_SPRETEiJ_G0016952	C1d	100	91.525	Mus_spretus
ENSSTOG00000012346	C1D	100	97.163	ENSMPUG00000006224	C1D	100	97.163	Mustela_putorius_furo
ENSSTOG00000012346	C1D	99	95.000	ENSMLUG00000010791	-	99	95.000	Myotis_lucifugus
ENSSTOG00000012346	C1D	99	92.857	ENSMLUG00000024947	-	99	92.857	Myotis_lucifugus
ENSSTOG00000012346	C1D	99	91.429	ENSMLUG00000029990	-	99	91.429	Myotis_lucifugus
ENSSTOG00000012346	C1D	89	81.746	ENSNGAG00000012482	-	100	81.746	Nannospalax_galili
ENSSTOG00000012346	C1D	100	89.362	ENSNGAG00000011872	-	100	89.362	Nannospalax_galili
ENSSTOG00000012346	C1D	100	81.560	ENSNGAG00000016675	-	100	81.560	Nannospalax_galili
ENSSTOG00000012346	C1D	82	66.379	ENSNBRG00000010704	c1d	87	63.780	Neolamprologus_brichardi
ENSSTOG00000012346	C1D	100	97.163	ENSNLEG00000032919	-	78	97.163	Nomascus_leucogenys
ENSSTOG00000012346	C1D	100	95.745	ENSOPRG00000009586	C1D	100	95.745	Ochotona_princeps
ENSSTOG00000012346	C1D	99	95.714	ENSODEG00000011242	-	99	95.714	Octodon_degus
ENSSTOG00000012346	C1D	98	95.652	ENSODEG00000018885	-	99	95.652	Octodon_degus
ENSSTOG00000012346	C1D	100	85.816	ENSODEG00000018525	-	100	85.816	Octodon_degus
ENSSTOG00000012346	C1D	87	66.667	ENSONIG00000001233	c1d	89	64.179	Oreochromis_niloticus
ENSSTOG00000012346	C1D	78	86.364	ENSOANG00000008385	C1D	99	86.364	Ornithorhynchus_anatinus
ENSSTOG00000012346	C1D	100	95.745	ENSOCUG00000025587	-	100	95.745	Oryctolagus_cuniculus
ENSSTOG00000012346	C1D	100	95.745	ENSOCUG00000009771	-	100	95.745	Oryctolagus_cuniculus
ENSSTOG00000012346	C1D	89	68.000	ENSORLG00000021968	c1d	80	68.000	Oryzias_latipes
ENSSTOG00000012346	C1D	89	68.000	ENSORLG00020000507	c1d	81	68.000	Oryzias_latipes_hni
ENSSTOG00000012346	C1D	89	68.000	ENSORLG00015004594	c1d	80	68.000	Oryzias_latipes_hsok
ENSSTOG00000012346	C1D	89	68.800	ENSOMEG00000004672	c1d	80	68.800	Oryzias_melastigma
ENSSTOG00000012346	C1D	100	96.454	ENSOGAG00000027934	-	100	96.454	Otolemur_garnettii
ENSSTOG00000012346	C1D	100	96.454	ENSOARG00000019931	C1D	99	96.454	Ovis_aries
ENSSTOG00000012346	C1D	100	97.872	ENSPPAG00000037847	-	100	97.872	Pan_paniscus
ENSSTOG00000012346	C1D	100	90.780	ENSPPAG00000040091	-	80	90.780	Pan_paniscus
ENSSTOG00000012346	C1D	100	66.667	ENSPPRG00000022830	-	100	66.667	Panthera_pardus
ENSSTOG00000012346	C1D	100	97.163	ENSPPRG00000017045	-	100	97.163	Panthera_pardus
ENSSTOG00000012346	C1D	100	97.872	ENSPTIG00000009414	C1D	100	97.872	Panthera_tigris_altaica
ENSSTOG00000012346	C1D	100	97.872	ENSPTRG00000023558	C1D	100	97.872	Pan_troglodytes
ENSSTOG00000012346	C1D	100	94.326	ENSPANG00000000501	-	100	94.326	Papio_anubis
ENSSTOG00000012346	C1D	100	97.163	ENSPANG00000002886	C1D	78	97.163	Papio_anubis
ENSSTOG00000012346	C1D	99	61.702	ENSPKIG00000004877	c1d	95	61.702	Paramormyrops_kingsleyae
ENSSTOG00000012346	C1D	94	82.707	ENSPSIG00000010015	C1D	92	82.707	Pelodiscus_sinensis
ENSSTOG00000012346	C1D	91	63.566	ENSPMGG00000009326	c1d	85	62.879	Periophthalmus_magnuspinnatus
ENSSTOG00000012346	C1D	100	75.177	ENSPCIG00000006831	-	98	75.177	Phascolarctos_cinereus
ENSSTOG00000012346	C1D	99	82.270	ENSPCIG00000018629	-	99	82.270	Phascolarctos_cinereus
ENSSTOG00000012346	C1D	96	64.706	ENSPFOG00000003686	c1d	88	64.706	Poecilia_formosa
ENSSTOG00000012346	C1D	96	64.706	ENSPLAG00000000228	c1d	96	64.706	Poecilia_latipinna
ENSSTOG00000012346	C1D	96	64.706	ENSPMEG00000023213	c1d	88	64.706	Poecilia_mexicana
ENSSTOG00000012346	C1D	99	64.029	ENSPREG00000000742	c1d	98	64.029	Poecilia_reticulata
ENSSTOG00000012346	C1D	100	97.872	ENSPPYG00000012354	C1D	77	97.872	Pongo_abelii
ENSSTOG00000012346	C1D	100	90.780	ENSPPYG00000002294	-	100	90.780	Pongo_abelii
ENSSTOG00000012346	C1D	100	85.106	ENSPCAG00000010088	C1D	79	85.106	Procavia_capensis
ENSSTOG00000012346	C1D	100	95.745	ENSPCOG00000016112	C1D	100	95.745	Propithecus_coquereli
ENSSTOG00000012346	C1D	100	96.454	ENSPVAG00000012692	C1D	79	96.454	Pteropus_vampyrus
ENSSTOG00000012346	C1D	82	67.241	ENSPNYG00000008789	c1d	87	64.567	Pundamilia_nyererei
ENSSTOG00000012346	C1D	99	64.336	ENSPNAG00000004219	c1d	98	64.336	Pygocentrus_nattereri
ENSSTOG00000012346	C1D	100	90.071	ENSRNOG00000005982	C1d	100	90.071	Rattus_norvegicus
ENSSTOG00000012346	C1D	100	93.617	ENSRBIG00000026211	-	100	93.617	Rhinopithecus_bieti
ENSSTOG00000012346	C1D	100	97.163	ENSRROG00000029013	C1D	100	97.163	Rhinopithecus_roxellana
ENSSTOG00000012346	C1D	100	93.617	ENSRROG00000005944	-	100	93.617	Rhinopithecus_roxellana
ENSSTOG00000012346	C1D	100	97.872	ENSSBOG00000025275	C1D	100	97.872	Saimiri_boliviensis_boliviensis
ENSSTOG00000012346	C1D	99	81.560	ENSSHAG00000008352	C1D	68	81.560	Sarcophilus_harrisii
ENSSTOG00000012346	C1D	88	68.800	ENSSFOG00015010861	c1d	89	68.800	Scleropages_formosus
ENSSTOG00000012346	C1D	91	63.281	ENSSMAG00000019230	c1d	83	63.281	Scophthalmus_maximus
ENSSTOG00000012346	C1D	100	62.411	ENSSDUG00000020213	c1d	91	62.411	Seriola_dumerili
ENSSTOG00000012346	C1D	100	62.411	ENSSLDG00000017371	c1d	91	62.411	Seriola_lalandi_dorsalis
ENSSTOG00000012346	C1D	93	78.788	ENSSPUG00000006525	C1D	97	75.887	Sphenodon_punctatus
ENSSTOG00000012346	C1D	92	66.923	ENSSPAG00000008574	c1d	89	65.217	Stegastes_partitus
ENSSTOG00000012346	C1D	100	97.163	ENSSSCG00000039331	-	100	97.163	Sus_scrofa
ENSSTOG00000012346	C1D	85	75.000	ENSSSCG00000035701	-	100	75.000	Sus_scrofa
ENSSTOG00000012346	C1D	98	78.014	ENSTGUG00000002367	C1D	98	78.014	Taeniopygia_guttata
ENSSTOG00000012346	C1D	94	60.870	ENSTRUG00000012245	c1d	83	60.870	Takifugu_rubripes
ENSSTOG00000012346	C1D	99	60.714	ENSTNIG00000009827	c1d	95	60.714	Tetraodon_nigroviridis
ENSSTOG00000012346	C1D	100	95.745	ENSTBEG00000009797	C1D	100	95.745	Tupaia_belangeri
ENSSTOG00000012346	C1D	100	95.745	ENSTTRG00000013982	C1D	81	95.745	Tursiops_truncatus
ENSSTOG00000012346	C1D	100	83.333	ENSUAMG00000025246	C1D	100	83.333	Ursus_americanus
ENSSTOG00000012346	C1D	100	97.872	ENSUMAG00000021118	-	100	97.872	Ursus_maritimus
ENSSTOG00000012346	C1D	72	75.000	ENSUMAG00000006451	-	91	74.561	Ursus_maritimus
ENSSTOG00000012346	C1D	100	95.035	ENSVPAG00000012080	C1D	79	95.035	Vicugna_pacos
ENSSTOG00000012346	C1D	100	95.745	ENSVVUG00000027629	C1D	88	95.745	Vulpes_vulpes
ENSSTOG00000012346	C1D	99	70.922	ENSXETG00000025934	c1d	97	70.922	Xenopus_tropicalis
ENSSTOG00000012346	C1D	89	66.400	ENSXCOG00000013813	c1d	88	63.971	Xiphophorus_couchianus
ENSSTOG00000012346	C1D	89	65.600	ENSXMAG00000022273	c1d	88	63.235	Xiphophorus_maculatus