EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSTOG00000012531 (Gene tree)
Gene ID: 101964984
Gene Symbol: TRMT1
Alias: FLJ20244|TRM1
Full Name: tRNA methyltransferase 1
Gene Type: protein_coding
Species: Ictidomys_tridecemlineatus
Status: putative
Strand: Minus strand
Length: 8797 bases
Position: chrJH393469.1:2140932-2149728
Accession: 101964984
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSTOP00000011237	zf-CCCH	PF00642.24	4.7e-07	1	1
ENSSTOP00000026059	zf-CCCH	PF00642.24	5.1e-07	1	1
ENSSTOP00000026922	zf-CCCH	PF00642.24	5.8e-07	1	1
ENSSTOP00000026922	TRM	PF02005.16	1.8e-150	1	1
ENSSTOP00000026059	TRM	PF02005.16	1.8e-150	1	1
ENSSTOP00000011237	TRM	PF02005.16	9.2e-142	1	1
ENSSTOP00000011237	Met_10	PF02475.16	8.5e-06	1	1
ENSSTOP00000026922	Met_10	PF02475.16	8.9e-06	1	1
ENSSTOP00000026059	Met_10	PF02475.16	9.1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSTOT00000040411	TRMT1-202	1959	-	ENSSTOP00000026922	652 (aa)	-	A0A287D033
ENSSTOT00000030575	TRMT1-201	3916	XM_005336227	ENSSTOP00000026059	661 (aa)	XP_005336284	A0A287CXT1
ENSSTOT00000012539	TRMT1-203	1899	-	ENSSTOP00000011237	632 (aa)	-	I3MJC6

Gene Model

Click here to download ENSSTOG00000012531's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSTOG00000012531's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSTOG00000012531	TRMT1	96	89.819	ENSG00000104907	TRMT1	100	93.194	Homo_sapiens
ENSSTOG00000012531	TRMT1	100	85.671	ENSAMEG00000012598	TRMT1	99	85.671	Ailuropoda_melanoleuca
ENSSTOG00000012531	TRMT1	93	55.732	ENSACIG00000018680	trmt1	97	55.732	Amphilophus_citrinellus
ENSSTOG00000012531	TRMT1	91	64.154	ENSAOCG00000006781	trmt1	88	64.154	Amphiprion_ocellaris
ENSSTOG00000012531	TRMT1	91	64.214	ENSAPEG00000007712	trmt1	88	64.214	Amphiprion_percula
ENSSTOG00000012531	TRMT1	88	67.014	ENSATEG00000001872	trmt1	84	67.014	Anabas_testudineus
ENSSTOG00000012531	TRMT1	89	66.781	ENSACAG00000003825	TRMT1	94	66.781	Anolis_carolinensis
ENSSTOG00000012531	TRMT1	98	84.480	ENSANAG00000023016	TRMT1	99	86.893	Aotus_nancymaae
ENSSTOG00000012531	TRMT1	91	60.956	ENSACLG00000010073	trmt1	97	60.956	Astatotilapia_calliptera
ENSSTOG00000012531	TRMT1	88	66.898	ENSAMXG00000012026	trmt1	85	66.898	Astyanax_mexicanus
ENSSTOG00000012531	TRMT1	100	85.973	ENSBTAG00000019325	TRMT1	94	85.973	Bos_taurus
ENSSTOG00000012531	TRMT1	81	40.631	WBGene00006613	trm-1	96	40.631	Caenorhabditis_elegans
ENSSTOG00000012531	TRMT1	96	84.615	ENSCJAG00000004566	TRMT1	98	84.615	Callithrix_jacchus
ENSSTOG00000012531	TRMT1	100	87.179	ENSCAFG00000017070	TRMT1	100	87.931	Canis_familiaris
ENSSTOG00000012531	TRMT1	100	87.539	ENSCAFG00020005397	TRMT1	100	87.539	Canis_lupus_dingo
ENSSTOG00000012531	TRMT1	100	86.145	ENSCHIG00000013569	TRMT1	100	86.145	Capra_hircus
ENSSTOG00000012531	TRMT1	96	82.803	ENSTSYG00000003207	TRMT1	99	81.763	Carlito_syrichta
ENSSTOG00000012531	TRMT1	85	82.971	ENSCAPG00000003355	TRMT1	97	82.971	Cavia_aperea
ENSSTOG00000012531	TRMT1	97	85.271	ENSCPOG00000011754	TRMT1	97	85.271	Cavia_porcellus
ENSSTOG00000012531	TRMT1	97	83.604	ENSCCAG00000022263	TRMT1	99	85.251	Cebus_capucinus
ENSSTOG00000012531	TRMT1	100	88.235	ENSCATG00000039850	TRMT1	100	88.235	Cercocebus_atys
ENSSTOG00000012531	TRMT1	85	72.939	ENSCATG00000038220	-	98	72.939	Cercocebus_atys
ENSSTOG00000012531	TRMT1	97	85.537	ENSCLAG00000015295	TRMT1	95	85.537	Chinchilla_lanigera
ENSSTOG00000012531	TRMT1	80	90.000	ENSCSAG00000006500	TRMT1	100	90.000	Chlorocebus_sabaeus
ENSSTOG00000012531	TRMT1	92	67.110	ENSCPBG00000023866	TRMT1	93	65.924	Chrysemys_picta_bellii
ENSSTOG00000012531	TRMT1	83	46.168	ENSCING00000002884	-	96	46.168	Ciona_intestinalis
ENSSTOG00000012531	TRMT1	84	45.668	ENSCSAVG00000010927	-	100	45.656	Ciona_savignyi
ENSSTOG00000012531	TRMT1	98	72.324	ENSCANG00000040631	TRMT1	99	72.324	Colobus_angolensis_palliatus
ENSSTOG00000012531	TRMT1	95	68.429	ENSCANG00000031650	-	98	68.069	Colobus_angolensis_palliatus
ENSSTOG00000012531	TRMT1	100	83.359	ENSCGRG00001022594	Trmt1	100	83.359	Cricetulus_griseus_chok1gshd
ENSSTOG00000012531	TRMT1	100	83.359	ENSCGRG00000017732	Trmt1	100	83.359	Cricetulus_griseus_crigri
ENSSTOG00000012531	TRMT1	87	65.499	ENSCSEG00000001643	trmt1	84	67.510	Cynoglossus_semilaevis
ENSSTOG00000012531	TRMT1	87	67.018	ENSCVAG00000011886	trmt1	85	67.018	Cyprinodon_variegatus
ENSSTOG00000012531	TRMT1	87	64.957	ENSDARG00000010978	trmt1	85	65.285	Danio_rerio
ENSSTOG00000012531	TRMT1	85	60.250	ENSDNOG00000048240	-	95	60.250	Dasypus_novemcinctus
ENSSTOG00000012531	TRMT1	99	82.979	ENSDORG00000014298	Trmt1	99	82.979	Dipodomys_ordii
ENSSTOG00000012531	TRMT1	80	48.302	FBgn0032430	CG6388	89	48.302	Drosophila_melanogaster
ENSSTOG00000012531	TRMT1	58	82.759	ENSETEG00000015483	-	55	82.759	Echinops_telfairi
ENSSTOG00000012531	TRMT1	79	53.772	ENSEBUG00000003449	trmt1	75	53.737	Eptatretus_burgeri
ENSSTOG00000012531	TRMT1	95	86.151	ENSEASG00005004050	TRMT1	100	85.423	Equus_asinus_asinus
ENSSTOG00000012531	TRMT1	95	86.151	ENSECAG00000016149	TRMT1	100	85.423	Equus_caballus
ENSSTOG00000012531	TRMT1	61	72.727	ENSEEUG00000014102	-	100	72.727	Erinaceus_europaeus
ENSSTOG00000012531	TRMT1	87	64.583	ENSELUG00000021659	trmt1	85	64.583	Esox_lucius
ENSSTOG00000012531	TRMT1	99	86.349	ENSFCAG00000000483	TRMT1	99	86.349	Felis_catus
ENSSTOG00000012531	TRMT1	99	83.837	ENSFDAG00000007386	TRMT1	99	83.837	Fukomys_damarensis
ENSSTOG00000012531	TRMT1	83	67.772	ENSFHEG00000012865	trmt1	90	67.587	Fundulus_heteroclitus
ENSSTOG00000012531	TRMT1	88	59.790	ENSGMOG00000006564	trmt1	98	59.790	Gadus_morhua
ENSSTOG00000012531	TRMT1	88	66.381	ENSGAFG00000011862	trmt1	90	66.381	Gambusia_affinis
ENSSTOG00000012531	TRMT1	88	63.176	ENSGACG00000000227	trmt1	92	63.368	Gasterosteus_aculeatus
ENSSTOG00000012531	TRMT1	93	66.720	ENSGAGG00000016432	TRMT1	91	66.720	Gopherus_agassizii
ENSSTOG00000012531	TRMT1	96	89.984	ENSGGOG00000014007	TRMT1	99	88.836	Gorilla_gorilla
ENSSTOG00000012531	TRMT1	90	55.912	ENSHBUG00000008821	trmt1	97	55.912	Haplochromis_burtoni
ENSSTOG00000012531	TRMT1	99	84.195	ENSHGLG00000015972	TRMT1	99	84.195	Heterocephalus_glaber_female
ENSSTOG00000012531	TRMT1	99	78.537	ENSHGLG00100018112	TRMT1	99	78.537	Heterocephalus_glaber_male
ENSSTOG00000012531	TRMT1	92	60.891	ENSHCOG00000009447	trmt1	93	60.891	Hippocampus_comes
ENSSTOG00000012531	TRMT1	89	64.262	ENSIPUG00000002899	trmt1	86	64.815	Ictalurus_punctatus
ENSSTOG00000012531	TRMT1	95	82.830	ENSJJAG00000017154	Trmt1	100	81.102	Jaculus_jaculus
ENSSTOG00000012531	TRMT1	87	67.544	ENSKMAG00000011809	trmt1	95	66.491	Kryptolebias_marmoratus
ENSSTOG00000012531	TRMT1	87	66.375	ENSLBEG00000012703	trmt1	84	66.375	Labrus_bergylta
ENSSTOG00000012531	TRMT1	87	57.941	ENSLACG00000014585	TRMT1	98	56.529	Latimeria_chalumnae
ENSSTOG00000012531	TRMT1	89	62.521	ENSLOCG00000006479	trmt1	99	62.692	Lepisosteus_oculatus
ENSSTOG00000012531	TRMT1	98	86.022	ENSLAFG00000014072	TRMT1	100	86.022	Loxodonta_africana
ENSSTOG00000012531	TRMT1	100	88.386	ENSMFAG00000033143	TRMT1	100	88.386	Macaca_fascicularis
ENSSTOG00000012531	TRMT1	99	84.505	ENSMMUG00000001167	TRMT1	100	84.505	Macaca_mulatta
ENSSTOG00000012531	TRMT1	100	88.235	ENSMNEG00000037867	TRMT1	100	88.235	Macaca_nemestrina
ENSSTOG00000012531	TRMT1	99	88.357	ENSMLEG00000016142	TRMT1	99	88.357	Mandrillus_leucophaeus
ENSSTOG00000012531	TRMT1	89	65.866	ENSMAMG00000004357	trmt1	87	65.866	Mastacembelus_armatus
ENSSTOG00000012531	TRMT1	87	63.937	ENSMZEG00005014510	trmt1	85	63.937	Maylandia_zebra
ENSSTOG00000012531	TRMT1	97	84.091	ENSMAUG00000011134	Trmt1	100	82.500	Mesocricetus_auratus
ENSSTOG00000012531	TRMT1	100	88.084	ENSMICG00000000793	TRMT1	100	88.084	Microcebus_murinus
ENSSTOG00000012531	TRMT1	97	84.472	ENSMOCG00000015895	Trmt1	100	82.934	Microtus_ochrogaster
ENSSTOG00000012531	TRMT1	87	65.789	ENSMMOG00000011097	trmt1	92	65.789	Mola_mola
ENSSTOG00000012531	TRMT1	91	77.349	ENSMODG00000011619	TRMT1	96	77.349	Monodelphis_domestica
ENSSTOG00000012531	TRMT1	100	83.125	MGP_CAROLIEiJ_G0031304	Trmt1	100	83.650	Mus_caroli
ENSSTOG00000012531	TRMT1	100	82.812	ENSMUSG00000001909	Trmt1	100	83.650	Mus_musculus
ENSSTOG00000012531	TRMT1	100	82.812	MGP_SPRETEiJ_G0032422	Trmt1	100	83.650	Mus_spretus
ENSSTOG00000012531	TRMT1	100	86.275	ENSMPUG00000004210	TRMT1	95	86.275	Mustela_putorius_furo
ENSSTOG00000012531	TRMT1	100	85.520	ENSMLUG00000012809	TRMT1	99	85.520	Myotis_lucifugus
ENSSTOG00000012531	TRMT1	100	81.505	ENSNGAG00000022486	Trmt1	100	81.505	Nannospalax_galili
ENSSTOG00000012531	TRMT1	76	68.263	ENSNBRG00000024376	trmt1	85	68.263	Neolamprologus_brichardi
ENSSTOG00000012531	TRMT1	81	89.254	ENSNLEG00000013019	-	99	89.254	Nomascus_leucogenys
ENSSTOG00000012531	TRMT1	91	76.431	ENSMEUG00000013756	TRMT1	99	76.431	Notamacropus_eugenii
ENSSTOG00000012531	TRMT1	78	89.100	ENSOPRG00000009471	-	79	89.100	Ochotona_princeps
ENSSTOG00000012531	TRMT1	99	85.015	ENSODEG00000010323	TRMT1	99	85.015	Octodon_degus
ENSSTOG00000012531	TRMT1	92	64.580	ENSONIG00000000400	trmt1	99	63.360	Oreochromis_niloticus
ENSSTOG00000012531	TRMT1	79	87.810	ENSOCUG00000021934	TRMT1	99	87.810	Oryctolagus_cuniculus
ENSSTOG00000012531	TRMT1	88	61.724	ENSORLG00000020074	trmt1	90	61.897	Oryzias_latipes
ENSSTOG00000012531	TRMT1	88	64.921	ENSORLG00020007561	trmt1	90	64.747	Oryzias_latipes_hni
ENSSTOG00000012531	TRMT1	88	65.096	ENSORLG00015006547	trmt1	86	65.096	Oryzias_latipes_hsok
ENSSTOG00000012531	TRMT1	92	63.079	ENSOMEG00000019343	trmt1	91	63.079	Oryzias_melastigma
ENSSTOG00000012531	TRMT1	97	84.013	ENSOGAG00000025576	TRMT1	100	84.013	Otolemur_garnettii
ENSSTOG00000012531	TRMT1	100	73.511	ENSOARG00000009397	TRMT1	94	72.811	Ovis_aries
ENSSTOG00000012531	TRMT1	99	77.573	ENSPPRG00000012117	TRMT1	100	78.341	Panthera_pardus
ENSSTOG00000012531	TRMT1	80	89.426	ENSPTIG00000008833	TRMT1	97	89.666	Panthera_tigris_altaica
ENSSTOG00000012531	TRMT1	96	89.819	ENSPTRG00000010557	TRMT1	99	88.676	Pan_troglodytes
ENSSTOG00000012531	TRMT1	96	68.571	ENSPTRG00000050421	-	96	68.571	Pan_troglodytes
ENSSTOG00000012531	TRMT1	99	88.871	ENSPANG00000009247	TRMT1	99	88.871	Papio_anubis
ENSSTOG00000012531	TRMT1	87	70.994	ENSPANG00000034058	-	99	70.994	Papio_anubis
ENSSTOG00000012531	TRMT1	88	68.586	ENSPKIG00000005309	trmt1	84	68.586	Paramormyrops_kingsleyae
ENSSTOG00000012531	TRMT1	90	58.092	ENSPSIG00000008762	TRMT1	83	58.092	Pelodiscus_sinensis
ENSSTOG00000012531	TRMT1	88	65.734	ENSPMGG00000019764	trmt1	98	62.219	Periophthalmus_magnuspinnatus
ENSSTOG00000012531	TRMT1	98	86.013	ENSPEMG00000016247	Trmt1	100	84.844	Peromyscus_maniculatus_bairdii
ENSSTOG00000012531	TRMT1	88	58.813	ENSPMAG00000004329	trmt1	90	58.813	Petromyzon_marinus
ENSSTOG00000012531	TRMT1	94	75.000	ENSPCIG00000019273	TRMT1	97	75.000	Phascolarctos_cinereus
ENSSTOG00000012531	TRMT1	88	68.096	ENSPFOG00000008527	trmt1	89	68.096	Poecilia_formosa
ENSSTOG00000012531	TRMT1	88	68.096	ENSPLAG00000018788	trmt1	90	69.533	Poecilia_latipinna
ENSSTOG00000012531	TRMT1	88	67.925	ENSPMEG00000013120	trmt1	89	67.925	Poecilia_mexicana
ENSSTOG00000012531	TRMT1	88	67.126	ENSPREG00000000211	trmt1	86	67.126	Poecilia_reticulata
ENSSTOG00000012531	TRMT1	96	90.256	ENSPPYG00000009622	TRMT1	99	88.872	Pongo_abelii
ENSSTOG00000012531	TRMT1	99	77.812	ENSPCAG00000003698	TRMT1	99	77.812	Procavia_capensis
ENSSTOG00000012531	TRMT1	99	88.658	ENSPCOG00000008653	TRMT1	99	88.658	Propithecus_coquereli
ENSSTOG00000012531	TRMT1	99	86.738	ENSPVAG00000015076	TRMT1	99	86.738	Pteropus_vampyrus
ENSSTOG00000012531	TRMT1	87	62.544	ENSPNYG00000013960	trmt1	92	62.544	Pundamilia_nyererei
ENSSTOG00000012531	TRMT1	82	68.333	ENSPNAG00000024859	trmt1	88	68.333	Pygocentrus_nattereri
ENSSTOG00000012531	TRMT1	98	84.317	ENSRNOG00000002914	Trmt1	100	84.317	Rattus_norvegicus
ENSSTOG00000012531	TRMT1	95	69.329	ENSRBIG00000037505	-	99	69.099	Rhinopithecus_bieti
ENSSTOG00000012531	TRMT1	100	88.084	ENSRBIG00000038324	TRMT1	100	88.084	Rhinopithecus_bieti
ENSSTOG00000012531	TRMT1	100	87.934	ENSRROG00000028599	TRMT1	100	87.934	Rhinopithecus_roxellana
ENSSTOG00000012531	TRMT1	95	68.530	ENSRROG00000031847	-	98	68.323	Rhinopithecus_roxellana
ENSSTOG00000012531	TRMT1	78	37.616	YDR120C	-	92	37.616	Saccharomyces_cerevisiae
ENSSTOG00000012531	TRMT1	98	84.295	ENSSBOG00000028861	TRMT1	99	86.062	Saimiri_boliviensis_boliviensis
ENSSTOG00000012531	TRMT1	90	77.816	ENSSHAG00000014381	TRMT1	96	77.462	Sarcophilus_harrisii
ENSSTOG00000012531	TRMT1	89	67.126	ENSSFOG00015004139	trmt1	85	67.126	Scleropages_formosus
ENSSTOG00000012531	TRMT1	87	67.073	ENSSMAG00000021136	trmt1	85	67.073	Scophthalmus_maximus
ENSSTOG00000012531	TRMT1	89	65.136	ENSSDUG00000012740	trmt1	86	65.136	Seriola_dumerili
ENSSTOG00000012531	TRMT1	89	65.582	ENSSLDG00000005971	trmt1	86	65.582	Seriola_lalandi_dorsalis
ENSSTOG00000012531	TRMT1	86	84.155	ENSSARG00000005138	TRMT1	100	84.155	Sorex_araneus
ENSSTOG00000012531	TRMT1	88	54.138	ENSSPUG00000001084	TRMT1	90	54.483	Sphenodon_punctatus
ENSSTOG00000012531	TRMT1	91	62.689	ENSSPAG00000007153	trmt1	97	62.689	Stegastes_partitus
ENSSTOG00000012531	TRMT1	98	88.419	ENSSSCG00000013744	TRMT1	100	88.419	Sus_scrofa
ENSSTOG00000012531	TRMT1	87	61.847	ENSTRUG00000010700	trmt1	86	61.847	Takifugu_rubripes
ENSSTOG00000012531	TRMT1	88	65.559	ENSTNIG00000018808	trmt1	98	65.559	Tetraodon_nigroviridis
ENSSTOG00000012531	TRMT1	98	84.938	ENSTTRG00000006379	TRMT1	99	84.674	Tursiops_truncatus
ENSSTOG00000012531	TRMT1	99	85.957	ENSUAMG00000022911	TRMT1	100	85.400	Ursus_americanus
ENSSTOG00000012531	TRMT1	98	86.364	ENSUMAG00000006027	TRMT1	100	86.364	Ursus_maritimus
ENSSTOG00000012531	TRMT1	100	86.878	ENSVVUG00000024177	TRMT1	100	86.878	Vulpes_vulpes
ENSSTOG00000012531	TRMT1	71	70.259	ENSXETG00000033863	TRMT1	92	70.259	Xenopus_tropicalis
ENSSTOG00000012531	TRMT1	87	67.832	ENSXCOG00000015733	trmt1	88	67.832	Xiphophorus_couchianus
ENSSTOG00000012531	TRMT1	87	67.426	ENSXMAG00000013823	trmt1	97	67.483	Xiphophorus_maculatus