EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSTOG00000012838 (Gene tree)
Gene ID: 101966852
Gene Symbol: DDX39B
Alias: BAT1|D6S81E|UAP56
Full Name: DExD-box helicase 39B
Gene Type: protein_coding
Species: Ictidomys_tridecemlineatus
Status: putative
Strand: Plus strand
Length: 12692 bases
Position: chrJH393537.1:1968094-1980785
Accession: 101966852
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSTOP00000011504	ResIII	PF04851.15	1.8e-07	1	1
ENSSTOP00000011504	DEAD	PF00270.29	6.7e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSTOT00000012838	DDX39B-201	2373	XM_005339020	ENSSTOP00000011504	428 (aa)	XP_005339077	I3MJW2

Gene Model

Click here to download ENSSTOG00000012838's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSTOG00000012838's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSTOG00000012838	DDX39B	91	32.331	ENSSTOG00000006938	DDX19A	82	32.331
ENSSTOG00000012838	DDX39B	86	32.703	ENSSTOG00000031966	-	88	32.703
ENSSTOG00000012838	DDX39B	77	30.321	ENSSTOG00000012526	DDX5	55	30.321
ENSSTOG00000012838	DDX39B	84	31.720	ENSSTOG00000003749	DDX25	82	31.852
ENSSTOG00000012838	DDX39B	92	36.802	ENSSTOG00000024814	EIF4A1	95	36.802
ENSSTOG00000012838	DDX39B	99	34.033	ENSSTOG00000014475	DDX6	79	35.659
ENSSTOG00000012838	DDX39B	91	32.080	ENSSTOG00000025733	-	82	32.080
ENSSTOG00000012838	DDX39B	83	35.493	ENSSTOG00000027266	DDX47	79	35.493
ENSSTOG00000012838	DDX39B	100	90.888	ENSSTOG00000013762	DDX39A	100	91.121
ENSSTOG00000012838	DDX39B	86	38.919	ENSSTOG00000012601	-	94	36.364
ENSSTOG00000012838	DDX39B	87	31.496	ENSSTOG00000006749	DDX49	78	31.496
ENSSTOG00000012838	DDX39B	85	38.356	ENSSTOG00000002664	EIF4A3	88	38.356

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSTOG00000012838	DDX39B	100	99.533	ENSG00000198563	DDX39B	100	100.000	Homo_sapiens
ENSSTOG00000012838	DDX39B	100	99.299	ENSAMEG00000009508	DDX39B	99	99.299	Ailuropoda_melanoleuca
ENSSTOG00000012838	DDX39B	99	93.208	ENSACIG00000004534	ddx39b	98	93.208	Amphilophus_citrinellus
ENSSTOG00000012838	DDX39B	100	92.361	ENSATEG00000012366	ddx39b	100	92.361	Anabas_testudineus
ENSSTOG00000012838	DDX39B	100	96.737	ENSACAG00000012240	DDX39B	100	96.737	Anolis_carolinensis
ENSSTOG00000012838	DDX39B	100	99.533	ENSANAG00000030372	DDX39B	100	99.533	Aotus_nancymaae
ENSSTOG00000012838	DDX39B	99	90.323	ENSACLG00000018759	ddx39b	99	90.323	Astatotilapia_calliptera
ENSSTOG00000012838	DDX39B	100	91.972	ENSAMXG00000017837	ddx39b	100	91.972	Astyanax_mexicanus
ENSSTOG00000012838	DDX39B	100	99.299	ENSBTAG00000014490	DDX39B	100	99.299	Bos_taurus
ENSSTOG00000012838	DDX39B	100	99.533	ENSCJAG00000003152	DDX39B	100	99.533	Callithrix_jacchus
ENSSTOG00000012838	DDX39B	100	99.065	ENSCAFG00000000509	DDX39B	100	99.355	Canis_familiaris
ENSSTOG00000012838	DDX39B	100	99.065	ENSCAFG00020020530	DDX39B	100	99.065	Canis_lupus_dingo
ENSSTOG00000012838	DDX39B	100	99.299	ENSCHIG00000004579	DDX39B	100	99.299	Capra_hircus
ENSSTOG00000012838	DDX39B	100	84.813	ENSTSYG00000029741	-	91	87.619	Carlito_syrichta
ENSSTOG00000012838	DDX39B	100	99.533	ENSTSYG00000010226	-	100	99.533	Carlito_syrichta
ENSSTOG00000012838	DDX39B	100	99.766	ENSCAPG00000010066	DDX39B	100	99.766	Cavia_aperea
ENSSTOG00000012838	DDX39B	100	99.766	ENSCPOG00000002335	DDX39B	100	99.766	Cavia_porcellus
ENSSTOG00000012838	DDX39B	100	99.533	ENSCCAG00000027897	DDX39B	100	99.533	Cebus_capucinus
ENSSTOG00000012838	DDX39B	99	89.882	ENSCATG00000043709	DDX39B	99	89.882	Cercocebus_atys
ENSSTOG00000012838	DDX39B	100	99.766	ENSCLAG00000014555	DDX39B	100	99.766	Chinchilla_lanigera
ENSSTOG00000012838	DDX39B	99	99.294	ENSCSAG00000008517	DDX39B	100	99.294	Chlorocebus_sabaeus
ENSSTOG00000012838	DDX39B	64	99.267	ENSCPBG00000014671	-	100	99.267	Chrysemys_picta_bellii
ENSSTOG00000012838	DDX39B	100	99.533	ENSCANG00000041217	DDX39B	100	99.533	Colobus_angolensis_palliatus
ENSSTOG00000012838	DDX39B	83	84.078	ENSCGRG00001021916	-	89	84.078	Cricetulus_griseus_chok1gshd
ENSSTOG00000012838	DDX39B	57	98.367	ENSCGRG00001017315	-	95	98.544	Cricetulus_griseus_chok1gshd
ENSSTOG00000012838	DDX39B	57	98.367	ENSCGRG00000012479	-	76	98.367	Cricetulus_griseus_crigri
ENSSTOG00000012838	DDX39B	100	91.724	ENSDARG00000036069	ddx39b	100	91.954	Danio_rerio
ENSSTOG00000012838	DDX39B	100	99.533	ENSDNOG00000010215	DDX39B	100	99.533	Dasypus_novemcinctus
ENSSTOG00000012838	DDX39B	87	99.198	ENSDORG00000004985	Ddx39b	100	99.198	Dipodomys_ordii
ENSSTOG00000012838	DDX39B	87	86.898	ENSETEG00000009649	DDX39B	87	86.898	Echinops_telfairi
ENSSTOG00000012838	DDX39B	100	99.533	ENSEASG00005017156	DDX39B	100	99.533	Equus_asinus_asinus
ENSSTOG00000012838	DDX39B	100	99.533	ENSECAG00000007750	DDX39B	100	99.533	Equus_caballus
ENSSTOG00000012838	DDX39B	100	91.879	ENSELUG00000017904	ddx39b	100	91.879	Esox_lucius
ENSSTOG00000012838	DDX39B	100	99.299	ENSFCAG00000004497	DDX39B	100	99.299	Felis_catus
ENSSTOG00000012838	DDX39B	100	99.766	ENSFDAG00000011074	DDX39B	100	99.766	Fukomys_damarensis
ENSSTOG00000012838	DDX39B	74	99.051	ENSGAGG00000001300	-	80	99.051	Gopherus_agassizii
ENSSTOG00000012838	DDX39B	100	99.533	ENSGGOG00000005989	DDX39B	100	99.533	Gorilla_gorilla
ENSSTOG00000012838	DDX39B	100	99.299	ENSHGLG00000019248	DDX39B	100	99.299	Heterocephalus_glaber_female
ENSSTOG00000012838	DDX39B	100	99.299	ENSHGLG00100011850	DDX39B	100	99.299	Heterocephalus_glaber_male
ENSSTOG00000012838	DDX39B	100	90.826	ENSIPUG00000015733	DDX39B	94	91.284	Ictalurus_punctatus
ENSSTOG00000012838	DDX39B	100	98.832	ENSJJAG00000005660	-	100	98.832	Jaculus_jaculus
ENSSTOG00000012838	DDX39B	66	79.078	ENSLBEG00000017177	-	85	75.102	Labrus_bergylta
ENSSTOG00000012838	DDX39B	99	78.251	ENSLBEG00000012254	ddx39b	99	78.220	Labrus_bergylta
ENSSTOG00000012838	DDX39B	100	89.401	ENSLACG00000002110	DDX39B	100	89.401	Latimeria_chalumnae
ENSSTOG00000012838	DDX39B	100	99.299	ENSLAFG00000014202	DDX39B	100	99.299	Loxodonta_africana
ENSSTOG00000012838	DDX39B	100	99.533	ENSMFAG00000034233	DDX39B	100	99.533	Macaca_fascicularis
ENSSTOG00000012838	DDX39B	100	99.533	ENSMMUG00000008839	DDX39B	100	99.533	Macaca_mulatta
ENSSTOG00000012838	DDX39B	100	99.533	ENSMNEG00000041059	DDX39B	100	99.533	Macaca_nemestrina
ENSSTOG00000012838	DDX39B	100	99.533	ENSMLEG00000043791	DDX39B	100	99.533	Mandrillus_leucophaeus
ENSSTOG00000012838	DDX39B	99	90.323	ENSMZEG00005017654	ddx39b	99	90.323	Maylandia_zebra
ENSSTOG00000012838	DDX39B	100	98.832	ENSMAUG00000008059	Ddx39b	100	98.832	Mesocricetus_auratus
ENSSTOG00000012838	DDX39B	100	99.533	ENSMICG00000017349	DDX39B	100	99.533	Microcebus_murinus
ENSSTOG00000012838	DDX39B	100	99.065	ENSMOCG00000011169	Ddx39b	100	99.065	Microtus_ochrogaster
ENSSTOG00000012838	DDX39B	88	99.202	ENSMODG00000015791	DDX39B	88	99.202	Monodelphis_domestica
ENSSTOG00000012838	DDX39B	100	99.065	ENSMUSG00000019432	Ddx39b	100	99.324	Mus_musculus
ENSSTOG00000012838	DDX39B	100	99.065	MGP_PahariEiJ_G0020513	Ddx39b	100	99.324	Mus_pahari
ENSSTOG00000012838	DDX39B	100	99.065	MGP_SPRETEiJ_G0022424	Ddx39b	100	99.065	Mus_spretus
ENSSTOG00000012838	DDX39B	100	99.299	ENSMPUG00000011407	DDX39B	100	99.299	Mustela_putorius_furo
ENSSTOG00000012838	DDX39B	73	99.357	ENSMLUG00000001681	DDX39B	100	99.357	Myotis_lucifugus
ENSSTOG00000012838	DDX39B	100	99.533	ENSNGAG00000022948	Ddx39b	100	99.533	Nannospalax_galili
ENSSTOG00000012838	DDX39B	100	75.000	ENSNLEG00000006094	DDX39B	100	75.000	Nomascus_leucogenys
ENSSTOG00000012838	DDX39B	86	99.550	ENSMEUG00000008264	DDX39B	86	99.550	Notamacropus_eugenii
ENSSTOG00000012838	DDX39B	100	99.299	ENSOPRG00000011923	DDX39B	100	99.299	Ochotona_princeps
ENSSTOG00000012838	DDX39B	100	99.533	ENSODEG00000018083	DDX39B	100	99.533	Octodon_degus
ENSSTOG00000012838	DDX39B	100	91.435	ENSONIG00000004740	ddx39b	100	91.435	Oreochromis_niloticus
ENSSTOG00000012838	DDX39B	55	98.312	ENSOANG00000008361	DDX39B	95	98.312	Ornithorhynchus_anatinus
ENSSTOG00000012838	DDX39B	100	95.711	ENSOCUG00000024126	DDX39B	100	95.711	Oryctolagus_cuniculus
ENSSTOG00000012838	DDX39B	100	98.135	ENSOGAG00000028850	-	100	98.135	Otolemur_garnettii
ENSSTOG00000012838	DDX39B	84	91.444	ENSOGAG00000009067	-	100	97.840	Otolemur_garnettii
ENSSTOG00000012838	DDX39B	100	99.299	ENSOARG00000008787	DDX39B	98	99.299	Ovis_aries
ENSSTOG00000012838	DDX39B	100	99.533	ENSPPAG00000043072	DDX39B	100	99.533	Pan_paniscus
ENSSTOG00000012838	DDX39B	100	99.299	ENSPPRG00000001913	DDX39B	100	99.299	Panthera_pardus
ENSSTOG00000012838	DDX39B	100	98.364	ENSPTIG00000017669	DDX39B	100	98.364	Panthera_tigris_altaica
ENSSTOG00000012838	DDX39B	100	99.533	ENSPTRG00000032509	DDX39B	100	99.533	Pan_troglodytes
ENSSTOG00000012838	DDX39B	100	99.533	ENSPANG00000018609	DDX39B	100	99.533	Papio_anubis
ENSSTOG00000012838	DDX39B	100	90.389	ENSPKIG00000011324	ddx39b	100	91.076	Paramormyrops_kingsleyae
ENSSTOG00000012838	DDX39B	100	98.832	ENSPEMG00000016905	Ddx39b	100	98.832	Peromyscus_maniculatus_bairdii
ENSSTOG00000012838	DDX39B	100	99.533	ENSPCIG00000017572	DDX39B	100	99.533	Phascolarctos_cinereus
ENSSTOG00000012838	DDX39B	100	99.533	ENSPPYG00000016433	DDX39B	100	99.533	Pongo_abelii
ENSSTOG00000012838	DDX39B	66	98.944	ENSPCAG00000003484	DDX39B	100	98.944	Procavia_capensis
ENSSTOG00000012838	DDX39B	100	99.533	ENSPCOG00000018656	DDX39B	100	99.533	Propithecus_coquereli
ENSSTOG00000012838	DDX39B	100	99.065	ENSPVAG00000004653	DDX39B	100	99.065	Pteropus_vampyrus
ENSSTOG00000012838	DDX39B	98	82.547	ENSPNYG00000010382	ddx39b	98	82.670	Pundamilia_nyererei
ENSSTOG00000012838	DDX39B	100	91.743	ENSPNAG00000026926	ddx39b	100	91.743	Pygocentrus_nattereri
ENSSTOG00000012838	DDX39B	100	99.065	ENSRNOG00000000841	Ddx39b	100	99.065	Rattus_norvegicus
ENSSTOG00000012838	DDX39B	100	89.252	ENSRBIG00000031309	DDX39B	100	89.252	Rhinopithecus_bieti
ENSSTOG00000012838	DDX39B	100	99.533	ENSRROG00000039517	DDX39B	100	99.533	Rhinopithecus_roxellana
ENSSTOG00000012838	DDX39B	100	89.252	ENSSBOG00000035513	-	100	89.252	Saimiri_boliviensis_boliviensis
ENSSTOG00000012838	DDX39B	100	99.533	ENSSHAG00000003209	DDX39B	100	99.533	Sarcophilus_harrisii
ENSSTOG00000012838	DDX39B	100	90.618	ENSSFOG00015016107	ddx39b	100	91.304	Scleropages_formosus
ENSSTOG00000012838	DDX39B	100	92.824	ENSSDUG00000011557	ddx39b	100	93.056	Seriola_dumerili
ENSSTOG00000012838	DDX39B	100	92.593	ENSSLDG00000015763	ddx39b	100	92.824	Seriola_lalandi_dorsalis
ENSSTOG00000012838	DDX39B	87	87.166	ENSSARG00000005245	DDX39B	100	87.166	Sorex_araneus
ENSSTOG00000012838	DDX39B	100	97.430	ENSSPUG00000012805	DDX39B	100	97.430	Sphenodon_punctatus
ENSSTOG00000012838	DDX39B	100	99.533	ENSSSCG00000001400	DDX39B	100	99.422	Sus_scrofa
ENSSTOG00000012838	DDX39B	100	76.636	ENSTBEG00000003721	DDX39B	100	76.636	Tupaia_belangeri
ENSSTOG00000012838	DDX39B	100	90.993	ENSTTRG00000014074	DDX39B	100	90.993	Tursiops_truncatus
ENSSTOG00000012838	DDX39B	100	86.512	ENSUAMG00000027335	DDX39B	100	86.512	Ursus_americanus
ENSSTOG00000012838	DDX39B	100	90.421	ENSUMAG00000015124	DDX39B	100	90.421	Ursus_maritimus
ENSSTOG00000012838	DDX39B	61	100.000	ENSVPAG00000009167	-	74	100.000	Vicugna_pacos
ENSSTOG00000012838	DDX39B	100	99.065	ENSVVUG00000019518	DDX39B	99	99.065	Vulpes_vulpes
ENSSTOG00000012838	DDX39B	100	83.721	ENSXETG00000002498	ddx39b	99	83.721	Xenopus_tropicalis