EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSTOG00000012883 (Gene tree)
Gene ID: 101960698
Gene Symbol: TSEN54
Alias: SEN54|SEN54L
Full Name: tRNA splicing endonuclease subunit 54
Gene Type: protein_coding
Species: Ictidomys_tridecemlineatus
Status: putative
Strand: Plus strand
Length: 8857 bases
Position: chrJH393404.1:744494-753350
Accession: 101960698
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSTOP00000011549	tRNA_int_end_N2	PF12928.7	3.1e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSTOT00000012884	TSEN54-201	2144	XM_005332563	ENSSTOP00000011549	523 (aa)	XP_005332620	I3MJZ6

Gene Model

Click here to download ENSSTOG00000012883's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSTOG00000012883's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSTOG00000012883	TSEN54	100	80.418	ENSG00000182173	TSEN54	100	91.667	Homo_sapiens
ENSSTOG00000012883	TSEN54	97	46.275	ENSAPOG00000009659	tsen54	99	44.000	Acanthochromis_polyacanthus
ENSSTOG00000012883	TSEN54	99	77.170	ENSAMEG00000009414	TSEN54	99	77.736	Ailuropoda_melanoleuca
ENSSTOG00000012883	TSEN54	97	46.394	ENSAOCG00000000152	tsen54	95	46.394	Amphiprion_ocellaris
ENSSTOG00000012883	TSEN54	97	45.419	ENSAPEG00000018931	tsen54	94	46.004	Amphiprion_percula
ENSSTOG00000012883	TSEN54	97	42.476	ENSATEG00000019860	tsen54	97	43.371	Anabas_testudineus
ENSSTOG00000012883	TSEN54	86	49.673	ENSAPLG00000009419	TSEN54	100	49.673	Anas_platyrhynchos
ENSSTOG00000012883	TSEN54	99	51.229	ENSACAG00000006714	TSEN54	99	51.229	Anolis_carolinensis
ENSSTOG00000012883	TSEN54	99	80.539	ENSANAG00000024061	TSEN54	99	81.333	Aotus_nancymaae
ENSSTOG00000012883	TSEN54	97	45.211	ENSACLG00000019800	tsen54	96	44.802	Astatotilapia_calliptera
ENSSTOG00000012883	TSEN54	97	45.809	ENSAMXG00000006546	tsen54	96	45.809	Astyanax_mexicanus
ENSSTOG00000012883	TSEN54	100	76.792	ENSBTAG00000000824	TSEN54	100	77.589	Bos_taurus
ENSSTOG00000012883	TSEN54	99	79.576	ENSCJAG00000014278	TSEN54	99	80.381	Callithrix_jacchus
ENSSTOG00000012883	TSEN54	100	79.473	ENSCAFG00000004798	TSEN54	100	80.226	Canis_familiaris
ENSSTOG00000012883	TSEN54	100	79.473	ENSCAFG00020000312	TSEN54	100	80.226	Canis_lupus_dingo
ENSSTOG00000012883	TSEN54	100	77.905	ENSCHIG00000019908	TSEN54	100	77.905	Capra_hircus
ENSSTOG00000012883	TSEN54	86	77.363	ENSTSYG00000037439	TSEN54	100	78.022	Carlito_syrichta
ENSSTOG00000012883	TSEN54	99	80.732	ENSCCAG00000036624	TSEN54	99	80.571	Cebus_capucinus
ENSSTOG00000012883	TSEN54	97	81.836	ENSCATG00000042877	TSEN54	99	81.714	Cercocebus_atys
ENSSTOG00000012883	TSEN54	97	81.409	ENSCLAG00000002924	TSEN54	99	81.107	Chinchilla_lanigera
ENSSTOG00000012883	TSEN54	100	80.228	ENSCSAG00000004809	TSEN54	100	81.179	Chlorocebus_sabaeus
ENSSTOG00000012883	TSEN54	99	54.307	ENSCPBG00000028071	TSEN54	99	54.307	Chrysemys_picta_bellii
ENSSTOG00000012883	TSEN54	100	80.608	ENSCANG00000028053	TSEN54	100	80.608	Colobus_angolensis_palliatus
ENSSTOG00000012883	TSEN54	100	79.238	ENSCGRG00001020029	Tsen54	100	79.238	Cricetulus_griseus_chok1gshd
ENSSTOG00000012883	TSEN54	84	77.828	ENSCGRG00000016289	Tsen54	100	77.828	Cricetulus_griseus_crigri
ENSSTOG00000012883	TSEN54	80	38.771	ENSCSEG00000020586	tsen54	99	38.771	Cynoglossus_semilaevis
ENSSTOG00000012883	TSEN54	80	42.891	ENSDARG00000036844	tsen54	99	43.839	Danio_rerio
ENSSTOG00000012883	TSEN54	100	74.011	ENSDNOG00000018452	TSEN54	100	75.518	Dasypus_novemcinctus
ENSSTOG00000012883	TSEN54	100	81.143	ENSDORG00000004073	Tsen54	100	81.143	Dipodomys_ordii
ENSSTOG00000012883	TSEN54	97	37.051	ENSEBUG00000005203	TSEN54	95	37.051	Eptatretus_burgeri
ENSSTOG00000012883	TSEN54	100	79.811	ENSEASG00005000579	TSEN54	100	79.811	Equus_asinus_asinus
ENSSTOG00000012883	TSEN54	100	80.189	ENSECAG00000004924	TSEN54	100	80.189	Equus_caballus
ENSSTOG00000012883	TSEN54	86	73.465	ENSEEUG00000008467	TSEN54	100	73.465	Erinaceus_europaeus
ENSSTOG00000012883	TSEN54	97	43.715	ENSELUG00000017703	tsen54	90	43.715	Esox_lucius
ENSSTOG00000012883	TSEN54	100	78.908	ENSFCAG00000023712	TSEN54	100	79.473	Felis_catus
ENSSTOG00000012883	TSEN54	98	49.808	ENSFALG00000001119	TSEN54	98	50.284	Ficedula_albicollis
ENSSTOG00000012883	TSEN54	86	79.823	ENSFDAG00000019090	TSEN54	99	80.488	Fukomys_damarensis
ENSSTOG00000012883	TSEN54	97	46.615	ENSFHEG00000005470	tsen54	96	46.615	Fundulus_heteroclitus
ENSSTOG00000012883	TSEN54	81	45.833	ENSGMOG00000013146	tsen54	99	45.833	Gadus_morhua
ENSSTOG00000012883	TSEN54	95	48.228	ENSGALG00000047163	TSEN54	98	48.228	Gallus_gallus
ENSSTOG00000012883	TSEN54	97	46.899	ENSGAFG00000005111	tsen54	96	46.899	Gambusia_affinis
ENSSTOG00000012883	TSEN54	96	44.487	ENSGACG00000014987	tsen54	99	44.681	Gasterosteus_aculeatus
ENSSTOG00000012883	TSEN54	100	54.275	ENSGAGG00000006825	TSEN54	99	54.461	Gopherus_agassizii
ENSSTOG00000012883	TSEN54	97	80.118	ENSGGOG00000009417	TSEN54	100	81.102	Gorilla_gorilla
ENSSTOG00000012883	TSEN54	87	43.763	ENSHBUG00000018296	tsen54	99	37.500	Haplochromis_burtoni
ENSSTOG00000012883	TSEN54	100	82.286	ENSHGLG00000007979	TSEN54	100	82.286	Heterocephalus_glaber_female
ENSSTOG00000012883	TSEN54	100	81.333	ENSHGLG00100005497	TSEN54	100	81.333	Heterocephalus_glaber_male
ENSSTOG00000012883	TSEN54	80	41.379	ENSHCOG00000007481	tsen54	99	41.839	Hippocampus_comes
ENSSTOG00000012883	TSEN54	99	41.055	ENSIPUG00000000590	tsen54	99	41.477	Ictalurus_punctatus
ENSSTOG00000012883	TSEN54	100	77.989	ENSJJAG00000007365	Tsen54	100	77.989	Jaculus_jaculus
ENSSTOG00000012883	TSEN54	97	44.914	ENSKMAG00000006944	tsen54	97	44.914	Kryptolebias_marmoratus
ENSSTOG00000012883	TSEN54	97	43.411	ENSLBEG00000004199	tsen54	97	43.605	Labrus_bergylta
ENSSTOG00000012883	TSEN54	97	46.374	ENSLACG00000009497	TSEN54	100	46.374	Latimeria_chalumnae
ENSSTOG00000012883	TSEN54	80	64.062	ENSLOCG00000011191	tsen54	97	46.314	Lepisosteus_oculatus
ENSSTOG00000012883	TSEN54	100	73.396	ENSLAFG00000011655	TSEN54	100	73.396	Loxodonta_africana
ENSSTOG00000012883	TSEN54	100	80.418	ENSMFAG00000000712	TSEN54	100	81.369	Macaca_fascicularis
ENSSTOG00000012883	TSEN54	100	80.228	ENSMNEG00000029199	TSEN54	100	81.179	Macaca_nemestrina
ENSSTOG00000012883	TSEN54	86	80.531	ENSMLEG00000044168	TSEN54	88	80.531	Mandrillus_leucophaeus
ENSSTOG00000012883	TSEN54	98	42.226	ENSMAMG00000019773	tsen54	98	43.289	Mastacembelus_armatus
ENSSTOG00000012883	TSEN54	97	45.211	ENSMZEG00005000884	tsen54	96	44.802	Maylandia_zebra
ENSSTOG00000012883	TSEN54	99	48.485	ENSMGAG00000009556	TSEN54	99	48.485	Meleagris_gallopavo
ENSSTOG00000012883	TSEN54	100	79.429	ENSMAUG00000016838	Tsen54	100	79.429	Mesocricetus_auratus
ENSSTOG00000012883	TSEN54	100	78.327	ENSMICG00000044012	TSEN54	100	79.087	Microcebus_murinus
ENSSTOG00000012883	TSEN54	100	79.619	ENSMOCG00000021585	Tsen54	100	79.619	Microtus_ochrogaster
ENSSTOG00000012883	TSEN54	96	43.307	ENSMMOG00000020189	tsen54	99	44.094	Mola_mola
ENSSTOG00000012883	TSEN54	98	65.348	ENSMODG00000007438	TSEN54	98	65.250	Monodelphis_domestica
ENSSTOG00000012883	TSEN54	97	43.856	ENSMALG00000020573	tsen54	97	43.856	Monopterus_albus
ENSSTOG00000012883	TSEN54	100	78.286	MGP_CAROLIEiJ_G0017417	Tsen54	100	78.286	Mus_caroli
ENSSTOG00000012883	TSEN54	100	78.286	ENSMUSG00000020781	Tsen54	100	78.286	Mus_musculus
ENSSTOG00000012883	TSEN54	100	78.286	MGP_PahariEiJ_G0018547	Tsen54	100	78.286	Mus_pahari
ENSSTOG00000012883	TSEN54	100	78.286	MGP_SPRETEiJ_G0018262	Tsen54	100	78.286	Mus_spretus
ENSSTOG00000012883	TSEN54	100	77.778	ENSMPUG00000013870	TSEN54	100	78.343	Mustela_putorius_furo
ENSSTOG00000012883	TSEN54	100	74.388	ENSMLUG00000015298	TSEN54	100	74.953	Myotis_lucifugus
ENSSTOG00000012883	TSEN54	100	79.429	ENSNGAG00000015673	Tsen54	100	79.429	Nannospalax_galili
ENSSTOG00000012883	TSEN54	89	61.028	ENSMEUG00000011908	TSEN54	100	61.028	Notamacropus_eugenii
ENSSTOG00000012883	TSEN54	100	71.917	ENSOPRG00000012513	TSEN54	100	71.917	Ochotona_princeps
ENSSTOG00000012883	TSEN54	97	45.224	ENSONIG00000009543	tsen54	96	45.224	Oreochromis_niloticus
ENSSTOG00000012883	TSEN54	99	71.940	ENSOCUG00000009875	TSEN54	99	72.316	Oryctolagus_cuniculus
ENSSTOG00000012883	TSEN54	97	44.773	ENSORLG00000000852	tsen54	97	44.773	Oryzias_latipes
ENSSTOG00000012883	TSEN54	97	45.149	ENSORLG00020018221	tsen54	97	45.365	Oryzias_latipes_hni
ENSSTOG00000012883	TSEN54	97	44.752	ENSORLG00015009413	tsen54	98	44.882	Oryzias_latipes_hsok
ENSSTOG00000012883	TSEN54	97	44.554	ENSOMEG00000014402	tsen54	94	44.554	Oryzias_melastigma
ENSSTOG00000012883	TSEN54	100	75.332	ENSOGAG00000001442	TSEN54	100	75.332	Otolemur_garnettii
ENSSTOG00000012883	TSEN54	86	73.684	ENSOARG00000010361	TSEN54	100	74.617	Ovis_aries
ENSSTOG00000012883	TSEN54	94	81.250	ENSPPAG00000043519	TSEN54	100	81.250	Pan_paniscus
ENSSTOG00000012883	TSEN54	100	79.096	ENSPPRG00000009162	TSEN54	100	79.661	Panthera_pardus
ENSSTOG00000012883	TSEN54	86	78.540	ENSPTIG00000019312	TSEN54	96	78.761	Panthera_tigris_altaica
ENSSTOG00000012883	TSEN54	100	80.228	ENSPTRG00000009646	TSEN54	100	81.179	Pan_troglodytes
ENSSTOG00000012883	TSEN54	99	80.571	ENSPANG00000020133	TSEN54	99	81.524	Papio_anubis
ENSSTOG00000012883	TSEN54	97	44.891	ENSPKIG00000023018	tsen54	100	44.240	Paramormyrops_kingsleyae
ENSSTOG00000012883	TSEN54	80	50.698	ENSPSIG00000012807	TSEN54	99	50.698	Pelodiscus_sinensis
ENSSTOG00000012883	TSEN54	92	36.714	ENSPMGG00000019578	tsen54	99	36.714	Periophthalmus_magnuspinnatus
ENSSTOG00000012883	TSEN54	100	79.810	ENSPEMG00000014857	Tsen54	100	80.571	Peromyscus_maniculatus_bairdii
ENSSTOG00000012883	TSEN54	98	46.212	ENSPFOG00000022740	tsen54	98	46.212	Poecilia_formosa
ENSSTOG00000012883	TSEN54	98	46.667	ENSPLAG00000014847	tsen54	98	46.667	Poecilia_latipinna
ENSSTOG00000012883	TSEN54	98	46.476	ENSPMEG00000022876	tsen54	98	46.476	Poecilia_mexicana
ENSSTOG00000012883	TSEN54	97	46.214	ENSPREG00000013090	tsen54	96	46.214	Poecilia_reticulata
ENSSTOG00000012883	TSEN54	91	74.895	ENSPPYG00000008629	TSEN54	100	75.314	Pongo_abelii
ENSSTOG00000012883	TSEN54	95	67.723	ENSPCAG00000002093	TSEN54	99	67.723	Procavia_capensis
ENSSTOG00000012883	TSEN54	100	81.179	ENSPCOG00000027880	TSEN54	100	81.939	Propithecus_coquereli
ENSSTOG00000012883	TSEN54	100	79.661	ENSPVAG00000008446	TSEN54	100	79.661	Pteropus_vampyrus
ENSSTOG00000012883	TSEN54	93	44.910	ENSPNYG00000010217	tsen54	99	45.000	Pundamilia_nyererei
ENSSTOG00000012883	TSEN54	97	44.821	ENSPNAG00000003770	tsen54	97	44.821	Pygocentrus_nattereri
ENSSTOG00000012883	TSEN54	100	77.905	ENSRNOG00000004598	Tsen54	100	77.905	Rattus_norvegicus
ENSSTOG00000012883	TSEN54	100	81.559	ENSRBIG00000043040	TSEN54	100	81.559	Rhinopithecus_bieti
ENSSTOG00000012883	TSEN54	100	81.369	ENSRROG00000030797	TSEN54	100	81.369	Rhinopithecus_roxellana
ENSSTOG00000012883	TSEN54	99	77.143	ENSSBOG00000013543	TSEN54	99	77.143	Saimiri_boliviensis_boliviensis
ENSSTOG00000012883	TSEN54	99	63.011	ENSSHAG00000018127	TSEN54	98	63.011	Sarcophilus_harrisii
ENSSTOG00000012883	TSEN54	81	43.692	ENSSFOG00015004093	tsen54	100	43.692	Scleropages_formosus
ENSSTOG00000012883	TSEN54	98	42.226	ENSSMAG00000012449	tsen54	99	42.964	Scophthalmus_maximus
ENSSTOG00000012883	TSEN54	97	45.703	ENSSDUG00000021506	tsen54	97	45.898	Seriola_dumerili
ENSSTOG00000012883	TSEN54	97	45.508	ENSSLDG00000016303	tsen54	97	45.703	Seriola_lalandi_dorsalis
ENSSTOG00000012883	TSEN54	80	50.472	ENSSPUG00000008988	TSEN54	97	50.469	Sphenodon_punctatus
ENSSTOG00000012883	TSEN54	92	46.045	ENSSPAG00000008098	-	99	46.045	Stegastes_partitus
ENSSTOG00000012883	TSEN54	80	41.080	ENSSPAG00000008047	tsen54	99	41.080	Stegastes_partitus
ENSSTOG00000012883	TSEN54	100	79.096	ENSSSCG00000036852	TSEN54	100	79.661	Sus_scrofa
ENSSTOG00000012883	TSEN54	86	50.221	ENSTGUG00000008548	TSEN54	100	50.221	Taeniopygia_guttata
ENSSTOG00000012883	TSEN54	97	45.736	ENSTRUG00000004230	tsen54	96	45.946	Takifugu_rubripes
ENSSTOG00000012883	TSEN54	86	77.511	ENSTTRG00000015828	TSEN54	100	77.511	Tursiops_truncatus
ENSSTOG00000012883	TSEN54	81	76.047	ENSUAMG00000010045	TSEN54	100	76.047	Ursus_americanus
ENSSTOG00000012883	TSEN54	84	76.629	ENSUMAG00000008979	TSEN54	100	76.854	Ursus_maritimus
ENSSTOG00000012883	TSEN54	97	78.752	ENSVVUG00000011411	TSEN54	98	79.417	Vulpes_vulpes
ENSSTOG00000012883	TSEN54	99	48.684	ENSXETG00000012532	tsen54	99	70.000	Xenopus_tropicalis
ENSSTOG00000012883	TSEN54	97	42.998	ENSXCOG00000018245	tsen54	99	42.998	Xiphophorus_couchianus
ENSSTOG00000012883	TSEN54	97	46.809	ENSXMAG00000018818	tsen54	96	46.809	Xiphophorus_maculatus