EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSTOG00000013050 (Gene tree)
Gene ID: 101968445
Gene Symbol: RBM42
Alias: MGC10433
Full Name: RNA binding motif protein 42
Gene Type: protein_coding
Species: Ictidomys_tridecemlineatus
Status: putative
Strand: Minus strand
Length: 8883 bases
Position: chrJH393380.1:676537-685419
Accession: 101968445
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSTOP00000030192	RRM_1	PF00076.22	5.5e-18	1	1
ENSSTOP00000011691	RRM_1	PF00076.22	5.9e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSTOT00000041225	RBM42-202	1862	XM_005330593	ENSSTOP00000030192	452 (aa)	XP_005330650	A0A287D9F0
ENSSTOT00000013047	RBM42-201	1928	XM_005330591	ENSSTOP00000011691	470 (aa)	XP_005330648	I3MK98

Gene Model

Click here to download ENSSTOG00000013050's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSTOG00000013050's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSTOG00000013050	RBM42	99	98.448	ENSG00000126254	RBM42	100	100.000	Homo_sapiens
ENSSTOG00000013050	RBM42	100	96.451	ENSAMEG00000000524	RBM42	100	96.451	Ailuropoda_melanoleuca
ENSSTOG00000013050	RBM42	100	96.646	ENSANAG00000027537	RBM42	100	100.000	Aotus_nancymaae
ENSSTOG00000013050	RBM42	100	96.855	ENSBTAG00000013440	RBM42	100	97.143	Bos_taurus
ENSSTOG00000013050	RBM42	100	98.511	ENSCJAG00000010220	RBM42	100	100.000	Callithrix_jacchus
ENSSTOG00000013050	RBM42	100	90.356	ENSCAFG00020018628	RBM42	96	100.000	Canis_lupus_dingo
ENSSTOG00000013050	RBM42	99	98.214	ENSCHIG00000009518	RBM42	100	98.214	Capra_hircus
ENSSTOG00000013050	RBM42	100	96.653	ENSTSYG00000014688	RBM42	100	100.000	Carlito_syrichta
ENSSTOG00000013050	RBM42	81	96.632	ENSCAPG00000009566	RBM42	99	96.632	Cavia_aperea
ENSSTOG00000013050	RBM42	100	98.230	ENSCPOG00000012365	RBM42	100	98.230	Cavia_porcellus
ENSSTOG00000013050	RBM42	100	97.275	ENSCCAG00000034440	RBM42	100	100.000	Cebus_capucinus
ENSSTOG00000013050	RBM42	99	98.004	ENSCATG00000041924	RBM42	100	100.000	Cercocebus_atys
ENSSTOG00000013050	RBM42	100	98.673	ENSCLAG00000012865	RBM42	100	98.673	Chinchilla_lanigera
ENSSTOG00000013050	RBM42	99	98.004	ENSCSAG00000004422	RBM42	100	98.004	Chlorocebus_sabaeus
ENSSTOG00000013050	RBM42	100	86.583	ENSCANG00000030272	RBM42	100	86.792	Colobus_angolensis_palliatus
ENSSTOG00000013050	RBM42	100	96.903	ENSCGRG00001018540	Rbm42	100	96.903	Cricetulus_griseus_chok1gshd
ENSSTOG00000013050	RBM42	99	97.118	ENSDNOG00000037397	RBM42	100	97.118	Dasypus_novemcinctus
ENSSTOG00000013050	RBM42	100	97.124	ENSDORG00000013001	Rbm42	100	97.124	Dipodomys_ordii
ENSSTOG00000013050	RBM42	75	92.754	ENSETEG00000007878	RBM42	74	92.754	Echinops_telfairi
ENSSTOG00000013050	RBM42	99	98.438	ENSEASG00005001074	RBM42	100	98.438	Equus_asinus_asinus
ENSSTOG00000013050	RBM42	99	98.438	ENSECAG00000018215	RBM42	100	98.438	Equus_caballus
ENSSTOG00000013050	RBM42	100	97.065	ENSFCAG00000006376	RBM42	100	100.000	Felis_catus
ENSSTOG00000013050	RBM42	100	96.696	ENSFDAG00000007440	RBM42	100	96.696	Fukomys_damarensis
ENSSTOG00000013050	RBM42	99	98.226	ENSGGOG00000009972	RBM42	100	100.000	Gorilla_gorilla
ENSSTOG00000013050	RBM42	100	96.239	ENSHGLG00000008418	RBM42	100	96.239	Heterocephalus_glaber_female
ENSSTOG00000013050	RBM42	100	96.239	ENSHGLG00100018667	RBM42	100	96.239	Heterocephalus_glaber_male
ENSSTOG00000013050	RBM42	100	96.239	ENSJJAG00000010421	Rbm42	100	96.239	Jaculus_jaculus
ENSSTOG00000013050	RBM42	98	92.094	ENSLAFG00000014993	RBM42	99	94.130	Loxodonta_africana
ENSSTOG00000013050	RBM42	99	98.004	ENSMFAG00000002758	RBM42	100	100.000	Macaca_fascicularis
ENSSTOG00000013050	RBM42	100	96.667	ENSMMUG00000018954	RBM42	100	100.000	Macaca_mulatta
ENSSTOG00000013050	RBM42	99	98.004	ENSMNEG00000030009	RBM42	100	100.000	Macaca_nemestrina
ENSSTOG00000013050	RBM42	99	98.226	ENSMLEG00000036119	RBM42	100	100.000	Mandrillus_leucophaeus
ENSSTOG00000013050	RBM42	100	97.694	ENSMICG00000009880	RBM42	100	100.000	Microcebus_murinus
ENSSTOG00000013050	RBM42	100	96.903	ENSMOCG00000000405	Rbm42	100	96.903	Microtus_ochrogaster
ENSSTOG00000013050	RBM42	99	97.561	MGP_CAROLIEiJ_G0029536	Rbm42	99	97.561	Mus_caroli
ENSSTOG00000013050	RBM42	99	97.561	ENSMUSG00000036733	Rbm42	99	97.561	Mus_musculus
ENSSTOG00000013050	RBM42	99	97.561	MGP_PahariEiJ_G0012770	Rbm42	99	97.561	Mus_pahari
ENSSTOG00000013050	RBM42	99	97.561	MGP_SPRETEiJ_G0030632	Rbm42	99	97.561	Mus_spretus
ENSSTOG00000013050	RBM42	99	98.661	ENSMPUG00000006288	RBM42	100	98.661	Mustela_putorius_furo
ENSSTOG00000013050	RBM42	100	95.597	ENSMLUG00000011334	RBM42	100	95.597	Myotis_lucifugus
ENSSTOG00000013050	RBM42	100	96.903	ENSNGAG00000019698	Rbm42	100	96.903	Nannospalax_galili
ENSSTOG00000013050	RBM42	67	100.000	ENSNLEG00000011272	-	94	89.944	Nomascus_leucogenys
ENSSTOG00000013050	RBM42	96	82.035	ENSMEUG00000016300	RBM42	100	80.864	Notamacropus_eugenii
ENSSTOG00000013050	RBM42	100	93.697	ENSOPRG00000001229	RBM42	100	91.807	Ochotona_princeps
ENSSTOG00000013050	RBM42	99	98.670	ENSODEG00000013705	RBM42	99	98.670	Octodon_degus
ENSSTOG00000013050	RBM42	99	98.004	ENSOCUG00000003337	RBM42	100	98.004	Oryctolagus_cuniculus
ENSSTOG00000013050	RBM42	100	96.226	ENSOGAG00000004144	RBM42	100	96.226	Otolemur_garnettii
ENSSTOG00000013050	RBM42	98	88.437	ENSOARG00000004926	RBM42	98	91.597	Ovis_aries
ENSSTOG00000013050	RBM42	99	98.661	ENSPPAG00000037315	RBM42	100	100.000	Pan_paniscus
ENSSTOG00000013050	RBM42	100	97.065	ENSPPRG00000016784	RBM42	100	100.000	Panthera_pardus
ENSSTOG00000013050	RBM42	100	96.646	ENSPTIG00000019270	RBM42	100	100.000	Panthera_tigris_altaica
ENSSTOG00000013050	RBM42	99	98.226	ENSPTRG00000010852	RBM42	100	100.000	Pan_troglodytes
ENSSTOG00000013050	RBM42	100	96.226	ENSPANG00000017032	RBM42	100	100.000	Papio_anubis
ENSSTOG00000013050	RBM42	100	97.788	ENSPEMG00000012065	Rbm42	100	97.788	Peromyscus_maniculatus_bairdii
ENSSTOG00000013050	RBM42	100	95.876	ENSPPYG00000009871	RBM42	100	95.876	Pongo_abelii
ENSSTOG00000013050	RBM42	88	96.393	ENSPCAG00000013053	RBM42	100	81.761	Procavia_capensis
ENSSTOG00000013050	RBM42	68	98.701	ENSPCOG00000020672	RBM42	81	96.997	Propithecus_coquereli
ENSSTOG00000013050	RBM42	100	97.694	ENSPCOG00000026433	-	100	100.000	Propithecus_coquereli
ENSSTOG00000013050	RBM42	100	96.646	ENSPVAG00000012815	RBM42	100	96.646	Pteropus_vampyrus
ENSSTOG00000013050	RBM42	99	97.783	ENSRNOG00000024278	Rbm42	99	97.783	Rattus_norvegicus
ENSSTOG00000013050	RBM42	99	98.004	ENSRBIG00000007566	RBM42	100	100.000	Rhinopithecus_bieti
ENSSTOG00000013050	RBM42	99	98.661	ENSRROG00000042313	RBM42	100	100.000	Rhinopithecus_roxellana
ENSSTOG00000013050	RBM42	90	92.840	ENSSBOG00000030666	RBM42	100	97.291	Saimiri_boliviensis_boliviensis
ENSSTOG00000013050	RBM42	100	86.250	ENSSARG00000010724	RBM42	100	86.250	Sorex_araneus
ENSSTOG00000013050	RBM42	99	97.545	ENSSSCG00000002905	RBM42	100	97.545	Sus_scrofa
ENSSTOG00000013050	RBM42	99	97.991	ENSUAMG00000020711	RBM42	100	97.991	Ursus_americanus
ENSSTOG00000013050	RBM42	100	96.646	ENSUMAG00000020223	RBM42	100	96.646	Ursus_maritimus
ENSSTOG00000013050	RBM42	100	98.511	ENSVVUG00000015117	RBM42	100	98.511	Vulpes_vulpes