EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSTOG00000013075 (Gene tree)
Gene ID: 101967637
Gene Symbol: UPF2
Alias: DKFZP434D222|KIAA1408|RENT2|smg-3
Full Name: UPF2%2C regulator of nonsense mediated mRNA decay
Gene Type: protein_coding
Species: Ictidomys_tridecemlineatus
Status: putative
Strand: Plus strand
Length: 115337 bases
Position: chrJH393294.1:3266190-3381526
Accession: 101967637
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSTOP00000011724	Upf2	PF04050.14	4.9e-33	1	1
ENSSTOP00000011724	MIF4G	PF02854.19	2e-76	1	3
ENSSTOP00000011724	MIF4G	PF02854.19	2e-76	2	3
ENSSTOP00000011724	MIF4G	PF02854.19	2e-76	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSTOT00000013082	UPF2-201	5168	XM_005320276	ENSSTOP00000011724	1270 (aa)	XP_005320333	I3MKC3

Gene Model

Click here to download ENSSTOG00000013075's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSTOG00000013075's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSTOG00000013075	UPF2	100	97.406	ENSG00000151461	UPF2	100	97.406	Homo_sapiens
ENSSTOG00000013075	UPF2	99	78.605	ENSAPOG00000015837	UPF2	100	78.448	Acanthochromis_polyacanthus
ENSSTOG00000013075	UPF2	100	98.190	ENSAMEG00000004586	UPF2	100	98.190	Ailuropoda_melanoleuca
ENSSTOG00000013075	UPF2	99	82.734	ENSACIG00000018078	UPF2	100	82.656	Amphilophus_citrinellus
ENSSTOG00000013075	UPF2	100	82.683	ENSAOCG00000016766	UPF2	100	82.761	Amphiprion_ocellaris
ENSSTOG00000013075	UPF2	100	82.761	ENSAPEG00000019084	UPF2	100	82.839	Amphiprion_percula
ENSSTOG00000013075	UPF2	100	82.582	ENSATEG00000021677	UPF2	99	82.632	Anabas_testudineus
ENSSTOG00000013075	UPF2	100	87.254	ENSAPLG00000010287	UPF2	90	91.739	Anas_platyrhynchos
ENSSTOG00000013075	UPF2	100	92.211	ENSACAG00000009259	UPF2	100	91.896	Anolis_carolinensis
ENSSTOG00000013075	UPF2	99	87.186	ENSANAG00000028451	UPF2	99	85.692	Aotus_nancymaae
ENSSTOG00000013075	UPF2	100	80.889	ENSACLG00000012696	UPF2	100	82.839	Astatotilapia_calliptera
ENSSTOG00000013075	UPF2	99	83.399	ENSAMXG00000013700	UPF2	99	83.477	Astyanax_mexicanus
ENSSTOG00000013075	UPF2	100	98.426	ENSBTAG00000000288	UPF2	100	98.426	Bos_taurus
ENSSTOG00000013075	UPF2	100	97.327	ENSCJAG00000020685	UPF2	100	97.327	Callithrix_jacchus
ENSSTOG00000013075	UPF2	100	98.112	ENSCAFG00000004839	UPF2	100	98.112	Canis_familiaris
ENSSTOG00000013075	UPF2	97	99.507	ENSCAFG00020005882	UPF2	100	99.490	Canis_lupus_dingo
ENSSTOG00000013075	UPF2	100	98.505	ENSCHIG00000020359	UPF2	100	98.505	Capra_hircus
ENSSTOG00000013075	UPF2	100	97.404	ENSTSYG00000000935	UPF2	100	97.404	Carlito_syrichta
ENSSTOG00000013075	UPF2	91	86.403	ENSCAPG00000016658	UPF2	95	86.489	Cavia_aperea
ENSSTOG00000013075	UPF2	99	96.355	ENSCPOG00000008809	UPF2	100	96.355	Cavia_porcellus
ENSSTOG00000013075	UPF2	100	90.873	ENSCCAG00000035991	UPF2	100	90.959	Cebus_capucinus
ENSSTOG00000013075	UPF2	100	97.642	ENSCATG00000032679	UPF2	100	97.642	Cercocebus_atys
ENSSTOG00000013075	UPF2	100	98.269	ENSCLAG00000011434	UPF2	100	98.269	Chinchilla_lanigera
ENSSTOG00000013075	UPF2	100	97.642	ENSCSAG00000013372	UPF2	100	97.642	Chlorocebus_sabaeus
ENSSTOG00000013075	UPF2	87	99.105	ENSCHOG00000000422	UPF2	89	99.105	Choloepus_hoffmanni
ENSSTOG00000013075	UPF2	99	93.144	ENSCPBG00000027823	UPF2	100	92.829	Chrysemys_picta_bellii
ENSSTOG00000013075	UPF2	79	49.264	ENSCSAVG00000007772	-	79	50.446	Ciona_savignyi
ENSSTOG00000013075	UPF2	99	91.400	ENSCANG00000040396	UPF2	100	92.047	Colobus_angolensis_palliatus
ENSSTOG00000013075	UPF2	100	98.268	ENSCGRG00001019347	Upf2	100	98.268	Cricetulus_griseus_chok1gshd
ENSSTOG00000013075	UPF2	100	98.268	ENSCGRG00000017993	Upf2	100	98.268	Cricetulus_griseus_crigri
ENSSTOG00000013075	UPF2	91	81.018	ENSCSEG00000003520	UPF2	71	83.259	Cynoglossus_semilaevis
ENSSTOG00000013075	UPF2	99	82.561	ENSCVAG00000006167	UPF2	100	82.168	Cyprinodon_variegatus
ENSSTOG00000013075	UPF2	100	97.954	ENSDNOG00000018160	UPF2	100	97.954	Dasypus_novemcinctus
ENSSTOG00000013075	UPF2	100	98.425	ENSDORG00000002478	Upf2	100	98.425	Dipodomys_ordii
ENSSTOG00000013075	UPF2	89	36.469	FBgn0029992	Upf2	82	43.860	Drosophila_melanogaster
ENSSTOG00000013075	UPF2	72	100.000	ENSETEG00000011583	-	66	100.000	Echinops_telfairi
ENSSTOG00000013075	UPF2	69	68.358	ENSEBUG00000012448	-	87	72.483	Eptatretus_burgeri
ENSSTOG00000013075	UPF2	100	97.954	ENSEASG00005019274	UPF2	100	97.954	Equus_asinus_asinus
ENSSTOG00000013075	UPF2	100	98.033	ENSECAG00000017022	UPF2	100	98.033	Equus_caballus
ENSSTOG00000013075	UPF2	82	93.291	ENSEEUG00000007819	UPF2	82	92.971	Erinaceus_europaeus
ENSSTOG00000013075	UPF2	99	81.079	ENSELUG00000012014	UPF2	100	81.182	Esox_lucius
ENSSTOG00000013075	UPF2	100	99.448	ENSFCAG00000005785	UPF2	100	98.269	Felis_catus
ENSSTOG00000013075	UPF2	100	93.076	ENSFALG00000001889	UPF2	98	93.548	Ficedula_albicollis
ENSSTOG00000013075	UPF2	100	98.189	ENSFDAG00000014348	UPF2	100	98.189	Fukomys_damarensis
ENSSTOG00000013075	UPF2	99	82.925	ENSFHEG00000009826	UPF2	99	82.660	Fundulus_heteroclitus
ENSSTOG00000013075	UPF2	91	83.578	ENSGMOG00000005557	UPF2	91	83.405	Gadus_morhua
ENSSTOG00000013075	UPF2	100	93.160	ENSGALG00000033772	UPF2	100	93.632	Gallus_gallus
ENSSTOG00000013075	UPF2	100	79.875	ENSGAFG00000020867	UPF2	100	81.669	Gambusia_affinis
ENSSTOG00000013075	UPF2	90	83.952	ENSGACG00000001080	UPF2	100	81.641	Gasterosteus_aculeatus
ENSSTOG00000013075	UPF2	100	93.470	ENSGAGG00000002700	UPF2	100	93.312	Gopherus_agassizii
ENSSTOG00000013075	UPF2	100	97.406	ENSGGOG00000001479	UPF2	100	97.406	Gorilla_gorilla
ENSSTOG00000013075	UPF2	100	80.733	ENSHBUG00000004249	UPF2	100	82.812	Haplochromis_burtoni
ENSSTOG00000013075	UPF2	99	87.008	ENSHGLG00000003822	-	99	84.949	Heterocephalus_glaber_female
ENSSTOG00000013075	UPF2	100	98.190	ENSHGLG00000015176	-	100	98.190	Heterocephalus_glaber_female
ENSSTOG00000013075	UPF2	99	95.110	ENSHGLG00100010036	UPF2	100	95.110	Heterocephalus_glaber_male
ENSSTOG00000013075	UPF2	100	80.653	ENSHCOG00000004025	UPF2	99	80.342	Hippocampus_comes
ENSSTOG00000013075	UPF2	100	82.201	ENSIPUG00000015524	UPF2	100	82.422	Ictalurus_punctatus
ENSSTOG00000013075	UPF2	100	97.244	ENSJJAG00000004913	Upf2	100	97.244	Jaculus_jaculus
ENSSTOG00000013075	UPF2	91	84.426	ENSKMAG00000001071	UPF2	99	82.567	Kryptolebias_marmoratus
ENSSTOG00000013075	UPF2	80	82.809	ENSLBEG00000000728	-	93	82.809	Labrus_bergylta
ENSSTOG00000013075	UPF2	100	83.139	ENSLBEG00000016394	-	99	82.957	Labrus_bergylta
ENSSTOG00000013075	UPF2	99	80.000	ENSLACG00000015945	UPF2	100	80.235	Latimeria_chalumnae
ENSSTOG00000013075	UPF2	99	85.658	ENSLOCG00000015698	UPF2	100	86.052	Lepisosteus_oculatus
ENSSTOG00000013075	UPF2	100	97.563	ENSMFAG00000043865	UPF2	100	97.563	Macaca_fascicularis
ENSSTOG00000013075	UPF2	100	97.563	ENSMMUG00000008241	UPF2	100	97.563	Macaca_mulatta
ENSSTOG00000013075	UPF2	81	96.976	ENSMNEG00000008062	UPF2	100	96.976	Macaca_nemestrina
ENSSTOG00000013075	UPF2	95	98.792	ENSMLEG00000036120	UPF2	100	98.792	Mandrillus_leucophaeus
ENSSTOG00000013075	UPF2	100	82.193	ENSMAMG00000018276	UPF2	100	82.321	Mastacembelus_armatus
ENSSTOG00000013075	UPF2	100	80.889	ENSMZEG00005021595	UPF2	100	82.839	Maylandia_zebra
ENSSTOG00000013075	UPF2	99	92.290	ENSMGAG00000004573	UPF2	99	92.762	Meleagris_gallopavo
ENSSTOG00000013075	UPF2	100	95.906	ENSMAUG00000016512	Upf2	100	95.906	Mesocricetus_auratus
ENSSTOG00000013075	UPF2	95	99.490	ENSMICG00000001716	UPF2	99	99.490	Microcebus_murinus
ENSSTOG00000013075	UPF2	100	97.480	ENSMOCG00000008263	Upf2	100	97.480	Microtus_ochrogaster
ENSSTOG00000013075	UPF2	99	80.453	ENSMMOG00000006528	UPF2	100	79.264	Mola_mola
ENSSTOG00000013075	UPF2	100	95.673	ENSMODG00000016794	UPF2	100	95.673	Monodelphis_domestica
ENSSTOG00000013075	UPF2	99	81.939	ENSMALG00000002663	UPF2	100	82.146	Monopterus_albus
ENSSTOG00000013075	UPF2	100	97.953	MGP_CAROLIEiJ_G0023157	Upf2	100	98.339	Mus_caroli
ENSSTOG00000013075	UPF2	100	97.638	ENSMUSG00000043241	Upf2	100	97.638	Mus_musculus
ENSSTOG00000013075	UPF2	100	97.559	MGP_PahariEiJ_G0019217	Upf2	100	97.559	Mus_pahari
ENSSTOG00000013075	UPF2	100	97.874	MGP_SPRETEiJ_G0024075	Upf2	100	97.874	Mus_spretus
ENSSTOG00000013075	UPF2	100	98.033	ENSMPUG00000001064	UPF2	100	98.033	Mustela_putorius_furo
ENSSTOG00000013075	UPF2	99	97.408	ENSMLUG00000000228	UPF2	100	97.408	Myotis_lucifugus
ENSSTOG00000013075	UPF2	100	80.889	ENSNBRG00000013629	UPF2	100	82.839	Neolamprologus_brichardi
ENSSTOG00000013075	UPF2	100	97.406	ENSNLEG00000012058	UPF2	100	97.406	Nomascus_leucogenys
ENSSTOG00000013075	UPF2	51	97.927	ENSMEUG00000002180	-	54	97.927	Notamacropus_eugenii
ENSSTOG00000013075	UPF2	82	100.000	ENSOPRG00000006801	-	82	100.000	Ochotona_princeps
ENSSTOG00000013075	UPF2	100	97.876	ENSODEG00000001290	UPF2	100	97.876	Octodon_degus
ENSSTOG00000013075	UPF2	100	80.967	ENSONIG00000017991	UPF2	100	82.917	Oreochromis_niloticus
ENSSTOG00000013075	UPF2	99	97.414	ENSOCUG00000006230	UPF2	100	97.414	Oryctolagus_cuniculus
ENSSTOG00000013075	UPF2	100	81.167	ENSORLG00000017189	UPF2	100	81.669	Oryzias_latipes
ENSSTOG00000013075	UPF2	100	81.167	ENSORLG00020005969	UPF2	100	81.669	Oryzias_latipes_hni
ENSSTOG00000013075	UPF2	100	81.167	ENSORLG00015005713	UPF2	100	81.669	Oryzias_latipes_hsok
ENSSTOG00000013075	UPF2	99	77.535	ENSOMEG00000023420	UPF2	98	78.890	Oryzias_melastigma
ENSSTOG00000013075	UPF2	100	97.482	ENSOGAG00000005796	UPF2	100	97.482	Otolemur_garnettii
ENSSTOG00000013075	UPF2	100	98.350	ENSOARG00000014587	UPF2	100	98.350	Ovis_aries
ENSSTOG00000013075	UPF2	99	93.584	ENSPPAG00000037953	UPF2	100	94.326	Pan_paniscus
ENSSTOG00000013075	UPF2	100	98.269	ENSPPRG00000000690	UPF2	100	98.269	Panthera_pardus
ENSSTOG00000013075	UPF2	100	98.269	ENSPTIG00000008867	UPF2	100	98.269	Panthera_tigris_altaica
ENSSTOG00000013075	UPF2	100	97.406	ENSPTRG00000002291	UPF2	100	97.406	Pan_troglodytes
ENSSTOG00000013075	UPF2	100	97.642	ENSPANG00000023399	UPF2	100	97.642	Papio_anubis
ENSSTOG00000013075	UPF2	100	79.719	ENSPKIG00000025502	UPF2	100	80.967	Paramormyrops_kingsleyae
ENSSTOG00000013075	UPF2	59	92.430	ENSPSIG00000015158	UPF2	95	92.430	Pelodiscus_sinensis
ENSSTOG00000013075	UPF2	99	80.597	ENSPMGG00000005259	UPF2	100	81.304	Periophthalmus_magnuspinnatus
ENSSTOG00000013075	UPF2	93	97.376	ENSPEMG00000015731	Upf2	99	97.376	Peromyscus_maniculatus_bairdii
ENSSTOG00000013075	UPF2	100	94.414	ENSPCIG00000006656	UPF2	100	94.886	Phascolarctos_cinereus
ENSSTOG00000013075	UPF2	100	79.907	ENSPFOG00000017118	UPF2	100	82.137	Poecilia_formosa
ENSSTOG00000013075	UPF2	100	79.907	ENSPLAG00000005094	UPF2	100	82.137	Poecilia_latipinna
ENSSTOG00000013075	UPF2	100	79.984	ENSPMEG00000017009	UPF2	100	82.215	Poecilia_mexicana
ENSSTOG00000013075	UPF2	99	79.796	ENSPREG00000021880	UPF2	100	82.224	Poecilia_reticulata
ENSSTOG00000013075	UPF2	66	98.684	ENSPPYG00000002089	-	100	98.684	Pongo_abelii
ENSSTOG00000013075	UPF2	100	83.399	ENSPCAG00000000684	UPF2	100	83.163	Procavia_capensis
ENSSTOG00000013075	UPF2	99	95.032	ENSPCOG00000021656	UPF2	100	95.110	Propithecus_coquereli
ENSSTOG00000013075	UPF2	100	90.409	ENSPVAG00000017286	UPF2	100	90.252	Pteropus_vampyrus
ENSSTOG00000013075	UPF2	99	78.438	ENSPNYG00000017096	UPF2	100	80.391	Pundamilia_nyererei
ENSSTOG00000013075	UPF2	100	83.685	ENSPNAG00000009357	UPF2	100	83.841	Pygocentrus_nattereri
ENSSTOG00000013075	UPF2	99	92.223	ENSRNOG00000023593	Upf2	100	100.000	Rattus_norvegicus
ENSSTOG00000013075	UPF2	99	96.688	ENSRBIG00000037780	UPF2	100	96.688	Rhinopithecus_bieti
ENSSTOG00000013075	UPF2	100	97.640	ENSRROG00000043547	UPF2	100	97.640	Rhinopithecus_roxellana
ENSSTOG00000013075	UPF2	100	97.325	ENSSBOG00000020012	UPF2	100	97.325	Saimiri_boliviensis_boliviensis
ENSSTOG00000013075	UPF2	100	80.982	ENSSFOG00015023788	upf2	100	82.541	Scleropages_formosus
ENSSTOG00000013075	UPF2	90	82.654	ENSSMAG00000007637	UPF2	100	78.837	Scophthalmus_maximus
ENSSTOG00000013075	UPF2	100	82.839	ENSSDUG00000017244	UPF2	99	82.839	Seriola_dumerili
ENSSTOG00000013075	UPF2	99	81.113	ENSSLDG00000016866	UPF2	82	84.267	Seriola_lalandi_dorsalis
ENSSTOG00000013075	UPF2	100	95.830	ENSSARG00000008615	UPF2	100	95.515	Sorex_araneus
ENSSTOG00000013075	UPF2	99	90.236	ENSSPUG00000014544	UPF2	99	89.843	Sphenodon_punctatus
ENSSTOG00000013075	UPF2	68	98.504	ENSSSCG00000011117	-	100	98.504	Sus_scrofa
ENSSTOG00000013075	UPF2	99	93.533	ENSTGUG00000002163	-	100	93.454	Taeniopygia_guttata
ENSSTOG00000013075	UPF2	100	81.931	ENSTRUG00000007519	UPF2	99	82.137	Takifugu_rubripes
ENSSTOG00000013075	UPF2	100	79.782	ENSTNIG00000004453	UPF2	100	79.595	Tetraodon_nigroviridis
ENSSTOG00000013075	UPF2	93	90.847	ENSTBEG00000012679	UPF2	93	90.847	Tupaia_belangeri
ENSSTOG00000013075	UPF2	100	98.033	ENSTTRG00000016388	UPF2	100	98.033	Tursiops_truncatus
ENSSTOG00000013075	UPF2	95	100.000	ENSUAMG00000023560	UPF2	99	100.000	Ursus_americanus
ENSSTOG00000013075	UPF2	100	98.348	ENSUMAG00000012953	UPF2	95	98.348	Ursus_maritimus
ENSSTOG00000013075	UPF2	85	96.774	ENSVPAG00000006763	UPF2	85	96.774	Vicugna_pacos
ENSSTOG00000013075	UPF2	100	98.033	ENSVVUG00000006166	UPF2	100	98.033	Vulpes_vulpes
ENSSTOG00000013075	UPF2	100	82.538	ENSXETG00000033103	UPF2	100	81.637	Xenopus_tropicalis
ENSSTOG00000013075	UPF2	91	84.215	ENSXCOG00000011604	UPF2	100	81.797	Xiphophorus_couchianus
ENSSTOG00000013075	UPF2	92	84.668	ENSXMAG00000017209	UPF2	100	81.825	Xiphophorus_maculatus