EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSTOG00000013112 (Gene tree)
Gene ID: 101957000
Gene Symbol: VARS
Alias: VARS2
Full Name: valyl-tRNA synthetase
Gene Type: protein_coding
Species: Ictidomys_tridecemlineatus
Status: putative
Strand: Plus strand
Length: 12672 bases
Position: chrJH393537.1:1752953-1765624
Accession: 101957000
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSTOP00000011772	tRNA-synt_1g	PF09334.11	7.3e-11	1	1
ENSSTOP00000011772	Anticodon_1	PF08264.13	5e-33	1	1
ENSSTOP00000011772	tRNA-synt_1	PF00133.22	2.5e-204	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSTOT00000013133	VARS-201	4206	XM_005338980	ENSSTOP00000011772	1265 (aa)	XP_005339037	I3MKG0

Gene Model

Click here to download ENSSTOG00000013112's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSTOG00000013112's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSTOG00000013112	VARS	81	49.903	ENSSTOG00000009924	VARS2	91	51.408

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSTOG00000013112	VARS	100	94.783	ENSG00000204394	VARS	100	97.126	Homo_sapiens
ENSSTOG00000013112	VARS	98	64.928	ENSAPOG00000020691	vars	99	64.767	Acanthochromis_polyacanthus
ENSSTOG00000013112	VARS	98	64.928	ENSAPOG00000020921	vars	99	64.767	Acanthochromis_polyacanthus
ENSSTOG00000013112	VARS	100	94.155	ENSAMEG00000006417	VARS	100	94.155	Ailuropoda_melanoleuca
ENSSTOG00000013112	VARS	100	65.439	ENSACIG00000013752	vars	100	65.515	Amphilophus_citrinellus
ENSSTOG00000013112	VARS	100	64.957	ENSAOCG00000002447	vars	100	64.201	Amphiprion_ocellaris
ENSSTOG00000013112	VARS	100	64.880	ENSAPEG00000010638	vars	99	65.031	Amphiprion_percula
ENSSTOG00000013112	VARS	100	65.039	ENSATEG00000020219	vars	100	64.724	Anabas_testudineus
ENSSTOG00000013112	VARS	90	69.705	ENSACAG00000029133	-	99	70.945	Anolis_carolinensis
ENSSTOG00000013112	VARS	100	94.704	ENSANAG00000015453	VARS	100	94.704	Aotus_nancymaae
ENSSTOG00000013112	VARS	100	64.961	ENSACLG00000025699	vars	97	65.035	Astatotilapia_calliptera
ENSSTOG00000013112	VARS	94	66.333	ENSAMXG00000017716	vars	95	66.333	Astyanax_mexicanus
ENSSTOG00000013112	VARS	100	94.625	ENSBTAG00000005631	VARS	100	94.625	Bos_taurus
ENSSTOG00000013112	VARS	100	94.625	ENSCJAG00000002604	VARS	100	94.625	Callithrix_jacchus
ENSSTOG00000013112	VARS	100	93.676	ENSCAFG00000000636	VARS	100	93.676	Canis_familiaris
ENSSTOG00000013112	VARS	94	93.840	ENSCAFG00020020790	VARS	96	93.840	Canis_lupus_dingo
ENSSTOG00000013112	VARS	100	94.783	ENSCHIG00000011008	VARS	100	94.783	Capra_hircus
ENSSTOG00000013112	VARS	100	94.862	ENSTSYG00000001567	VARS	100	94.862	Carlito_syrichta
ENSSTOG00000013112	VARS	91	91.530	ENSCAPG00000013736	VARS	99	91.530	Cavia_aperea
ENSSTOG00000013112	VARS	100	92.648	ENSCPOG00000000870	VARS	100	92.648	Cavia_porcellus
ENSSTOG00000013112	VARS	100	94.704	ENSCCAG00000035656	VARS	100	95.025	Cebus_capucinus
ENSSTOG00000013112	VARS	100	94.387	ENSCATG00000022394	VARS	100	94.387	Cercocebus_atys
ENSSTOG00000013112	VARS	90	88.917	ENSCLAG00000009470	VARS	95	88.917	Chinchilla_lanigera
ENSSTOG00000013112	VARS	100	94.625	ENSCSAG00000008784	VARS	100	94.625	Chlorocebus_sabaeus
ENSSTOG00000013112	VARS	77	73.922	ENSCPBG00000007943	VARS	96	74.025	Chrysemys_picta_bellii
ENSSTOG00000013112	VARS	100	94.545	ENSCANG00000033570	VARS	100	94.545	Colobus_angolensis_palliatus
ENSSTOG00000013112	VARS	100	93.834	ENSCGRG00001005686	Vars	100	93.834	Cricetulus_griseus_chok1gshd
ENSSTOG00000013112	VARS	92	88.703	ENSCGRG00000013352	Vars	78	88.703	Cricetulus_griseus_crigri
ENSSTOG00000013112	VARS	100	64.692	ENSCSEG00000019652	vars	100	64.613	Cynoglossus_semilaevis
ENSSTOG00000013112	VARS	100	65.734	ENSCVAG00000022398	vars	100	65.812	Cyprinodon_variegatus
ENSSTOG00000013112	VARS	100	64.701	ENSDARG00000044575	vars	100	64.852	Danio_rerio
ENSSTOG00000013112	VARS	84	93.797	ENSDORG00000016433	Vars	95	93.797	Dipodomys_ordii
ENSSTOG00000013112	VARS	69	86.618	ENSETEG00000003824	VARS	76	86.618	Echinops_telfairi
ENSSTOG00000013112	VARS	57	62.088	ENSEBUG00000004637	vars	100	62.363	Eptatretus_burgeri
ENSSTOG00000013112	VARS	50	71.325	ENSEBUG00000007086	vars	84	70.157	Eptatretus_burgeri
ENSSTOG00000013112	VARS	100	95.099	ENSEASG00005015673	VARS	100	95.099	Equus_asinus_asinus
ENSSTOG00000013112	VARS	100	94.392	ENSECAG00000014620	VARS	100	94.708	Equus_caballus
ENSSTOG00000013112	VARS	83	92.042	ENSEEUG00000004116	VARS	80	92.042	Erinaceus_europaeus
ENSSTOG00000013112	VARS	100	64.919	ENSELUG00000006550	vars	97	64.765	Esox_lucius
ENSSTOG00000013112	VARS	100	94.071	ENSFCAG00000004510	VARS	100	94.071	Felis_catus
ENSSTOG00000013112	VARS	82	93.100	ENSFDAG00000011401	VARS	100	93.100	Fukomys_damarensis
ENSSTOG00000013112	VARS	100	65.147	ENSFHEG00000010672	vars	100	65.579	Fundulus_heteroclitus
ENSSTOG00000013112	VARS	92	66.333	ENSGMOG00000014908	vars	97	66.667	Gadus_morhua
ENSSTOG00000013112	VARS	100	65.914	ENSGAFG00000021630	vars	100	65.837	Gambusia_affinis
ENSSTOG00000013112	VARS	92	66.639	ENSGACG00000009601	vars	98	66.417	Gasterosteus_aculeatus
ENSSTOG00000013112	VARS	50	64.511	ENSGAGG00000006508	-	91	63.880	Gopherus_agassizii
ENSSTOG00000013112	VARS	100	94.941	ENSGGOG00000011364	VARS	100	94.941	Gorilla_gorilla
ENSSTOG00000013112	VARS	100	64.961	ENSHBUG00000017151	vars	97	65.035	Haplochromis_burtoni
ENSSTOG00000013112	VARS	100	91.937	ENSHGLG00000011646	VARS	100	91.462	Heterocephalus_glaber_female
ENSSTOG00000013112	VARS	93	84.149	ENSHGLG00100018062	VARS	100	84.149	Heterocephalus_glaber_male
ENSSTOG00000013112	VARS	99	64.501	ENSHCOG00000012198	vars	99	64.574	Hippocampus_comes
ENSSTOG00000013112	VARS	100	65.058	ENSIPUG00000005218	vars	100	65.058	Ictalurus_punctatus
ENSSTOG00000013112	VARS	100	73.123	ENSJJAG00000015343	-	100	73.518	Jaculus_jaculus
ENSSTOG00000013112	VARS	100	92.490	ENSJJAG00000019749	-	100	92.411	Jaculus_jaculus
ENSSTOG00000013112	VARS	100	65.245	ENSKMAG00000009455	vars	100	64.929	Kryptolebias_marmoratus
ENSSTOG00000013112	VARS	100	64.720	ENSLBEG00000010341	vars	100	64.404	Labrus_bergylta
ENSSTOG00000013112	VARS	94	62.202	ENSLACG00000015232	VARS	99	62.787	Latimeria_chalumnae
ENSSTOG00000013112	VARS	100	66.328	ENSLOCG00000004240	vars	100	66.328	Lepisosteus_oculatus
ENSSTOG00000013112	VARS	100	93.043	ENSLAFG00000023090	VARS	100	93.439	Loxodonta_africana
ENSSTOG00000013112	VARS	100	94.625	ENSMFAG00000001032	VARS	100	94.625	Macaca_fascicularis
ENSSTOG00000013112	VARS	100	94.625	ENSMMUG00000006828	VARS	100	94.625	Macaca_mulatta
ENSSTOG00000013112	VARS	100	94.625	ENSMNEG00000042072	VARS	100	94.625	Macaca_nemestrina
ENSSTOG00000013112	VARS	100	94.545	ENSMLEG00000039307	VARS	100	94.545	Mandrillus_leucophaeus
ENSSTOG00000013112	VARS	100	64.981	ENSMAMG00000003949	vars	100	65.133	Mastacembelus_armatus
ENSSTOG00000013112	VARS	100	64.961	ENSMZEG00005018327	vars	100	64.432	Maylandia_zebra
ENSSTOG00000013112	VARS	100	93.439	ENSMAUG00000006715	Vars	100	93.439	Mesocricetus_auratus
ENSSTOG00000013112	VARS	100	94.150	ENSMICG00000003548	VARS	100	95.274	Microcebus_murinus
ENSSTOG00000013112	VARS	100	90.593	ENSMOCG00000015404	Vars	100	90.909	Microtus_ochrogaster
ENSSTOG00000013112	VARS	100	64.780	ENSMMOG00000015801	vars	100	64.623	Mola_mola
ENSSTOG00000013112	VARS	100	86.482	ENSMODG00000015204	-	100	86.482	Monodelphis_domestica
ENSSTOG00000013112	VARS	99	64.833	ENSMALG00000022532	vars	99	64.907	Monopterus_albus
ENSSTOG00000013112	VARS	100	93.676	MGP_CAROLIEiJ_G0021491	Vars	100	93.992	Mus_caroli
ENSSTOG00000013112	VARS	100	93.676	ENSMUSG00000007029	Vars	100	93.992	Mus_musculus
ENSSTOG00000013112	VARS	100	93.360	MGP_PahariEiJ_G0020486	Vars	100	93.755	Mus_pahari
ENSSTOG00000013112	VARS	100	93.755	MGP_SPRETEiJ_G0022396	Vars	100	94.071	Mus_spretus
ENSSTOG00000013112	VARS	100	94.150	ENSMPUG00000010821	VARS	100	94.150	Mustela_putorius_furo
ENSSTOG00000013112	VARS	78	92.922	ENSMLUG00000013126	VARS	100	93.428	Myotis_lucifugus
ENSSTOG00000013112	VARS	100	93.597	ENSNGAG00000012151	Vars	100	93.597	Nannospalax_galili
ENSSTOG00000013112	VARS	100	64.729	ENSNBRG00000020520	vars	100	64.802	Neolamprologus_brichardi
ENSSTOG00000013112	VARS	100	94.229	ENSNLEG00000006351	VARS	100	94.229	Nomascus_leucogenys
ENSSTOG00000013112	VARS	100	83.241	ENSMEUG00000011378	VARS	100	83.241	Notamacropus_eugenii
ENSSTOG00000013112	VARS	100	93.992	ENSOPRG00000003607	VARS	100	93.992	Ochotona_princeps
ENSSTOG00000013112	VARS	100	92.174	ENSODEG00000017681	VARS	100	92.174	Octodon_degus
ENSSTOG00000013112	VARS	100	65.364	ENSONIG00000013064	vars	99	68.522	Oreochromis_niloticus
ENSSTOG00000013112	VARS	77	79.335	ENSOANG00000005400	VARS	98	78.979	Ornithorhynchus_anatinus
ENSSTOG00000013112	VARS	100	92.022	ENSOCUG00000022463	VARS	100	91.864	Oryctolagus_cuniculus
ENSSTOG00000013112	VARS	100	64.977	ENSORLG00000013063	vars	100	65.050	Oryzias_latipes
ENSSTOG00000013112	VARS	100	65.426	ENSORLG00020003504	vars	100	65.581	Oryzias_latipes_hni
ENSSTOG00000013112	VARS	100	65.248	ENSORLG00015009001	vars	100	65.325	Oryzias_latipes_hsok
ENSSTOG00000013112	VARS	100	65.400	ENSOMEG00000015016	vars	100	65.477	Oryzias_melastigma
ENSSTOG00000013112	VARS	100	93.834	ENSOGAG00000007515	VARS	100	93.834	Otolemur_garnettii
ENSSTOG00000013112	VARS	100	95.020	ENSPPAG00000034012	VARS	100	95.020	Pan_paniscus
ENSSTOG00000013112	VARS	100	94.229	ENSPPRG00000014855	VARS	100	94.229	Panthera_pardus
ENSSTOG00000013112	VARS	85	94.243	ENSPTIG00000010462	VARS	95	94.236	Panthera_tigris_altaica
ENSSTOG00000013112	VARS	100	94.941	ENSPTRG00000017985	VARS	100	94.941	Pan_troglodytes
ENSSTOG00000013112	VARS	100	92.762	ENSPANG00000014565	VARS	100	92.762	Papio_anubis
ENSSTOG00000013112	VARS	100	63.398	ENSPKIG00000016304	vars	100	63.475	Paramormyrops_kingsleyae
ENSSTOG00000013112	VARS	100	65.520	ENSPMGG00000023909	vars	100	65.442	Periophthalmus_magnuspinnatus
ENSSTOG00000013112	VARS	100	94.229	ENSPEMG00000006639	Vars	100	94.229	Peromyscus_maniculatus_bairdii
ENSSTOG00000013112	VARS	100	86.166	ENSPCIG00000018553	VARS	100	86.166	Phascolarctos_cinereus
ENSSTOG00000013112	VARS	100	65.992	ENSPFOG00000015690	vars	100	66.070	Poecilia_formosa
ENSSTOG00000013112	VARS	100	66.562	ENSPLAG00000009590	vars	100	66.562	Poecilia_latipinna
ENSSTOG00000013112	VARS	100	65.992	ENSPMEG00000004708	vars	100	66.070	Poecilia_mexicana
ENSSTOG00000013112	VARS	100	63.978	ENSPREG00000013264	vars	100	63.978	Poecilia_reticulata
ENSSTOG00000013112	VARS	100	93.123	ENSPPYG00000016460	VARS	100	93.123	Pongo_abelii
ENSSTOG00000013112	VARS	86	92.101	ENSPCAG00000013565	VARS	86	92.101	Procavia_capensis
ENSSTOG00000013112	VARS	100	94.076	ENSPCOG00000010942	VARS	100	94.392	Propithecus_coquereli
ENSSTOG00000013112	VARS	100	90.909	ENSPVAG00000012403	VARS	100	90.909	Pteropus_vampyrus
ENSSTOG00000013112	VARS	100	64.961	ENSPNYG00000022511	vars	100	65.035	Pundamilia_nyererei
ENSSTOG00000013112	VARS	100	64.701	ENSPNAG00000020962	vars	100	64.701	Pygocentrus_nattereri
ENSSTOG00000013112	VARS	100	94.783	ENSRNOG00000000867	Vars	100	94.783	Rattus_norvegicus
ENSSTOG00000013112	VARS	100	94.545	ENSRBIG00000041669	VARS	100	94.545	Rhinopithecus_bieti
ENSSTOG00000013112	VARS	100	94.545	ENSRROG00000045490	VARS	100	94.545	Rhinopithecus_roxellana
ENSSTOG00000013112	VARS	100	94.308	ENSSBOG00000035402	VARS	100	94.308	Saimiri_boliviensis_boliviensis
ENSSTOG00000013112	VARS	100	81.947	ENSSHAG00000006937	VARS	100	82.182	Sarcophilus_harrisii
ENSSTOG00000013112	VARS	100	64.402	ENSSFOG00015014272	vars	100	64.479	Scleropages_formosus
ENSSTOG00000013112	VARS	100	63.777	ENSSMAG00000009596	vars	99	63.926	Scophthalmus_maximus
ENSSTOG00000013112	VARS	100	64.783	ENSSDUG00000014177	vars	100	65.012	Seriola_dumerili
ENSSTOG00000013112	VARS	100	64.706	ENSSLDG00000025316	vars	100	64.934	Seriola_lalandi_dorsalis
ENSSTOG00000013112	VARS	100	65.190	ENSSPAG00000017068	vars	100	65.265	Stegastes_partitus
ENSSTOG00000013112	VARS	100	92.891	ENSSSCG00000038950	VARS	100	93.207	Sus_scrofa
ENSSTOG00000013112	VARS	82	64.238	ENSTRUG00000012307	vars	98	64.088	Takifugu_rubripes
ENSSTOG00000013112	VARS	100	64.894	ENSTNIG00000008011	vars	100	65.047	Tetraodon_nigroviridis
ENSSTOG00000013112	VARS	54	97.004	ENSTBEG00000004728	-	60	97.004	Tupaia_belangeri
ENSSTOG00000013112	VARS	100	85.613	ENSTTRG00000014128	VARS	100	85.613	Tursiops_truncatus
ENSSTOG00000013112	VARS	100	90.652	ENSUAMG00000010424	VARS	100	90.652	Ursus_americanus
ENSSTOG00000013112	VARS	100	85.466	ENSUMAG00000013486	VARS	100	85.308	Ursus_maritimus
ENSSTOG00000013112	VARS	100	93.523	ENSVVUG00000021323	VARS	100	93.365	Vulpes_vulpes
ENSSTOG00000013112	VARS	96	62.894	ENSXETG00000024076	vars	98	62.702	Xenopus_tropicalis
ENSSTOG00000013112	VARS	100	65.618	ENSXCOG00000019172	vars	100	65.696	Xiphophorus_couchianus
ENSSTOG00000013112	VARS	100	65.759	ENSXMAG00000010927	vars	100	65.837	Xiphophorus_maculatus