EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSTOG00000013483 (Gene tree)
Gene ID: 101968195
Gene Symbol: TRMT13
Alias: CCDC76|FLJ10287|FLJ11219
Full Name: tRNA methyltransferase 13 homolog
Gene Type: protein_coding
Species: Ictidomys_tridecemlineatus
Status: putative
Strand: Plus strand
Length: 23472 bases
Position: chrJH393558.1:289684-313155
Accession: 101968195
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSTOP00000012082	TRM13	PF05206.14	1.1e-93	1	1
ENSSTOP00000012082	zf-U11-48K	PF05253.12	2.2e-09	1	1
ENSSTOP00000012082	zf-TRM13_CCCH	PF11722.8	2.6e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSTOT00000013484	TRMT13-201	3622	XM_005339684	ENSSTOP00000012082	480 (aa)	XP_005339741	I3ML36

Gene Model

Click here to download ENSSTOG00000013483's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSTOG00000013483's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSTOG00000013483	TRMT13	100	93.347	ENSG00000122435	TRMT13	100	93.347	Homo_sapiens
ENSSTOG00000013483	TRMT13	95	47.782	ENSAPOG00000015131	trmt13	99	47.984	Acanthochromis_polyacanthus
ENSSTOG00000013483	TRMT13	100	91.060	ENSAMEG00000008917	TRMT13	100	91.060	Ailuropoda_melanoleuca
ENSSTOG00000013483	TRMT13	99	49.284	ENSACIG00000005804	trmt13	95	49.362	Amphilophus_citrinellus
ENSSTOG00000013483	TRMT13	95	48.503	ENSAOCG00000023585	trmt13	99	48.503	Amphiprion_ocellaris
ENSSTOG00000013483	TRMT13	95	48.104	ENSAPEG00000004025	trmt13	99	48.104	Amphiprion_percula
ENSSTOG00000013483	TRMT13	97	50.105	ENSATEG00000006597	trmt13	97	50.105	Anabas_testudineus
ENSSTOG00000013483	TRMT13	88	67.136	ENSAPLG00000014924	TRMT13	99	67.136	Anas_platyrhynchos
ENSSTOG00000013483	TRMT13	96	63.853	ENSACAG00000003498	TRMT13	98	63.853	Anolis_carolinensis
ENSSTOG00000013483	TRMT13	100	93.971	ENSANAG00000019525	TRMT13	100	94.495	Aotus_nancymaae
ENSSTOG00000013483	TRMT13	96	52.331	ENSACLG00000020018	trmt13	99	52.331	Astatotilapia_calliptera
ENSSTOG00000013483	TRMT13	96	54.701	ENSAMXG00000017963	trmt13	98	54.777	Astyanax_mexicanus
ENSSTOG00000013483	TRMT13	100	90.644	ENSBTAG00000015781	TRMT13	100	90.644	Bos_taurus
ENSSTOG00000013483	TRMT13	100	92.100	ENSCJAG00000000200	TRMT13	99	94.495	Callithrix_jacchus
ENSSTOG00000013483	TRMT13	65	92.675	ENSCAFG00000020021	TRMT13	99	92.675	Canis_familiaris
ENSSTOG00000013483	TRMT13	57	93.040	ENSCAFG00020011572	TRMT13	95	92.364	Canis_lupus_dingo
ENSSTOG00000013483	TRMT13	100	91.042	ENSCHIG00000015395	TRMT13	99	91.042	Capra_hircus
ENSSTOG00000013483	TRMT13	98	81.818	ENSTSYG00000010811	TRMT13	98	88.889	Carlito_syrichta
ENSSTOG00000013483	TRMT13	75	70.523	ENSCAPG00000009085	TRMT13	100	71.074	Cavia_aperea
ENSSTOG00000013483	TRMT13	100	91.684	ENSCPOG00000000694	TRMT13	100	91.684	Cavia_porcellus
ENSSTOG00000013483	TRMT13	100	93.971	ENSCCAG00000023772	TRMT13	100	93.971	Cebus_capucinus
ENSSTOG00000013483	TRMT13	100	93.347	ENSCATG00000033556	TRMT13	100	93.578	Cercocebus_atys
ENSSTOG00000013483	TRMT13	89	85.480	ENSCLAG00000008220	TRMT13	100	86.183	Chinchilla_lanigera
ENSSTOG00000013483	TRMT13	100	93.971	ENSCSAG00000001506	TRMT13	100	93.971	Chlorocebus_sabaeus
ENSSTOG00000013483	TRMT13	99	70.000	ENSCPBG00000026671	TRMT13	99	70.000	Chrysemys_picta_bellii
ENSSTOG00000013483	TRMT13	100	94.179	ENSCANG00000034659	TRMT13	100	94.495	Colobus_angolensis_palliatus
ENSSTOG00000013483	TRMT13	99	87.110	ENSCGRG00001021601	Trmt13	99	87.110	Cricetulus_griseus_chok1gshd
ENSSTOG00000013483	TRMT13	53	84.825	ENSCGRG00000000093	-	99	84.825	Cricetulus_griseus_crigri
ENSSTOG00000013483	TRMT13	98	48.434	ENSCSEG00000000591	trmt13	99	48.434	Cynoglossus_semilaevis
ENSSTOG00000013483	TRMT13	95	48.536	ENSCVAG00000017342	trmt13	93	48.945	Cyprinodon_variegatus
ENSSTOG00000013483	TRMT13	96	56.897	ENSDARG00000102846	trmt13	96	56.897	Danio_rerio
ENSSTOG00000013483	TRMT13	57	90.217	ENSDNOG00000001710	TRMT13	84	90.217	Dasypus_novemcinctus
ENSSTOG00000013483	TRMT13	99	88.100	ENSDORG00000015808	Trmt13	99	88.100	Dipodomys_ordii
ENSSTOG00000013483	TRMT13	97	30.290	FBgn0037435	CG18048	95	30.290	Drosophila_melanogaster
ENSSTOG00000013483	TRMT13	99	76.458	ENSETEG00000005819	TRMT13	99	76.458	Echinops_telfairi
ENSSTOG00000013483	TRMT13	95	44.946	ENSEBUG00000014444	trmt13	96	44.828	Eptatretus_burgeri
ENSSTOG00000013483	TRMT13	100	93.971	ENSEASG00005015918	TRMT13	100	93.971	Equus_asinus_asinus
ENSSTOG00000013483	TRMT13	100	93.763	ENSECAG00000022626	TRMT13	100	93.763	Equus_caballus
ENSSTOG00000013483	TRMT13	79	81.962	ENSEEUG00000000294	TRMT13	80	81.962	Erinaceus_europaeus
ENSSTOG00000013483	TRMT13	96	55.556	ENSELUG00000003803	trmt13	98	55.889	Esox_lucius
ENSSTOG00000013483	TRMT13	100	92.516	ENSFCAG00000030618	TRMT13	100	96.330	Felis_catus
ENSSTOG00000013483	TRMT13	98	64.756	ENSFALG00000002424	TRMT13	98	64.756	Ficedula_albicollis
ENSSTOG00000013483	TRMT13	99	92.662	ENSFDAG00000006342	TRMT13	99	92.662	Fukomys_damarensis
ENSSTOG00000013483	TRMT13	77	51.302	ENSFHEG00000022954	trmt13	97	50.374	Fundulus_heteroclitus
ENSSTOG00000013483	TRMT13	95	48.352	ENSGMOG00000013223	trmt13	100	48.791	Gadus_morhua
ENSSTOG00000013483	TRMT13	95	66.960	ENSGALG00000005290	TRMT13	98	65.745	Gallus_gallus
ENSSTOG00000013483	TRMT13	75	51.200	ENSGAFG00000001577	trmt13	81	51.200	Gambusia_affinis
ENSSTOG00000013483	TRMT13	96	49.677	ENSGACG00000013428	trmt13	97	50.323	Gasterosteus_aculeatus
ENSSTOG00000013483	TRMT13	97	71.642	ENSGAGG00000023303	TRMT13	95	75.573	Gopherus_agassizii
ENSSTOG00000013483	TRMT13	100	93.139	ENSGGOG00000005616	TRMT13	100	93.139	Gorilla_gorilla
ENSSTOG00000013483	TRMT13	96	52.754	ENSHBUG00000007754	trmt13	99	52.754	Haplochromis_burtoni
ENSSTOG00000013483	TRMT13	99	93.291	ENSHGLG00000002164	TRMT13	99	93.291	Heterocephalus_glaber_female
ENSSTOG00000013483	TRMT13	99	93.291	ENSHGLG00100001618	TRMT13	99	93.291	Heterocephalus_glaber_male
ENSSTOG00000013483	TRMT13	96	47.527	ENSHCOG00000020553	trmt13	98	47.527	Hippocampus_comes
ENSSTOG00000013483	TRMT13	95	55.677	ENSIPUG00000024787	trmt13	97	56.277	Ictalurus_punctatus
ENSSTOG00000013483	TRMT13	98	90.275	ENSJJAG00000018012	Trmt13	99	90.275	Jaculus_jaculus
ENSSTOG00000013483	TRMT13	63	50.323	ENSKMAG00000007639	trmt13	92	49.511	Kryptolebias_marmoratus
ENSSTOG00000013483	TRMT13	96	49.895	ENSLBEG00000020238	trmt13	99	50.209	Labrus_bergylta
ENSSTOG00000013483	TRMT13	97	60.684	ENSLACG00000013153	TRMT13	99	59.900	Latimeria_chalumnae
ENSSTOG00000013483	TRMT13	96	57.952	ENSLOCG00000000418	trmt13	97	58.388	Lepisosteus_oculatus
ENSSTOG00000013483	TRMT13	77	88.649	ENSLAFG00000002383	TRMT13	100	88.649	Loxodonta_africana
ENSSTOG00000013483	TRMT13	100	93.763	ENSMFAG00000034681	TRMT13	100	94.495	Macaca_fascicularis
ENSSTOG00000013483	TRMT13	100	93.763	ENSMMUG00000004243	TRMT13	100	94.495	Macaca_mulatta
ENSSTOG00000013483	TRMT13	100	93.763	ENSMNEG00000036102	TRMT13	100	94.495	Macaca_nemestrina
ENSSTOG00000013483	TRMT13	100	93.763	ENSMLEG00000034258	TRMT13	100	95.413	Mandrillus_leucophaeus
ENSSTOG00000013483	TRMT13	95	50.759	ENSMAMG00000016597	trmt13	95	50.759	Mastacembelus_armatus
ENSSTOG00000013483	TRMT13	96	52.119	ENSMZEG00005020959	trmt13	99	52.119	Maylandia_zebra
ENSSTOG00000013483	TRMT13	88	67.849	ENSMGAG00000006970	TRMT13	99	67.849	Meleagris_gallopavo
ENSSTOG00000013483	TRMT13	99	86.526	ENSMAUG00000010448	Trmt13	99	86.526	Mesocricetus_auratus
ENSSTOG00000013483	TRMT13	100	94.179	ENSMICG00000005283	TRMT13	100	94.179	Microcebus_murinus
ENSSTOG00000013483	TRMT13	100	83.958	ENSMOCG00000019914	Trmt13	99	83.958	Microtus_ochrogaster
ENSSTOG00000013483	TRMT13	54	50.566	ENSMMOG00000007762	trmt13	89	50.566	Mola_mola
ENSSTOG00000013483	TRMT13	100	76.907	ENSMODG00000003646	TRMT13	100	76.907	Monodelphis_domestica
ENSSTOG00000013483	TRMT13	98	49.686	ENSMALG00000020965	trmt13	98	49.686	Monopterus_albus
ENSSTOG00000013483	TRMT13	99	86.737	MGP_CAROLIEiJ_G0025568	Trmt13	99	86.737	Mus_caroli
ENSSTOG00000013483	TRMT13	99	86.164	ENSMUSG00000033439	Trmt13	94	91.667	Mus_musculus
ENSSTOG00000013483	TRMT13	99	87.212	MGP_PahariEiJ_G0027014	Trmt13	99	87.212	Mus_pahari
ENSSTOG00000013483	TRMT13	99	86.373	MGP_SPRETEiJ_G0026518	Trmt13	94	91.667	Mus_spretus
ENSSTOG00000013483	TRMT13	79	88.714	ENSMPUG00000002078	-	100	88.714	Mustela_putorius_furo
ENSSTOG00000013483	TRMT13	99	80.462	ENSMLUG00000002124	TRMT13	99	80.462	Myotis_lucifugus
ENSSTOG00000013483	TRMT13	95	49.145	ENSNBRG00000006783	trmt13	97	49.145	Neolamprologus_brichardi
ENSSTOG00000013483	TRMT13	100	93.347	ENSNLEG00000035917	TRMT13	100	93.347	Nomascus_leucogenys
ENSSTOG00000013483	TRMT13	51	72.984	ENSMEUG00000013346	-	100	72.984	Notamacropus_eugenii
ENSSTOG00000013483	TRMT13	67	91.176	ENSOPRG00000012048	TRMT13	67	91.176	Ochotona_princeps
ENSSTOG00000013483	TRMT13	96	52.542	ENSONIG00000004574	trmt13	99	52.542	Oreochromis_niloticus
ENSSTOG00000013483	TRMT13	89	74.065	ENSOANG00000012057	TRMT13	99	74.065	Ornithorhynchus_anatinus
ENSSTOG00000013483	TRMT13	100	91.875	ENSOCUG00000023095	TRMT13	100	91.875	Oryctolagus_cuniculus
ENSSTOG00000013483	TRMT13	96	47.872	ENSORLG00000003320	trmt13	98	47.872	Oryzias_latipes
ENSSTOG00000013483	TRMT13	95	47.425	ENSORLG00020005972	trmt13	97	47.479	Oryzias_latipes_hni
ENSSTOG00000013483	TRMT13	96	51.064	ENSORLG00015002270	trmt13	98	51.064	Oryzias_latipes_hsok
ENSSTOG00000013483	TRMT13	97	50.837	ENSOMEG00000006724	trmt13	94	51.477	Oryzias_melastigma
ENSSTOG00000013483	TRMT13	99	93.869	ENSOGAG00000005618	TRMT13	97	93.139	Otolemur_garnettii
ENSSTOG00000013483	TRMT13	100	91.042	ENSOARG00000017983	TRMT13	99	91.042	Ovis_aries
ENSSTOG00000013483	TRMT13	100	92.723	ENSPPAG00000043736	TRMT13	100	92.723	Pan_paniscus
ENSSTOG00000013483	TRMT13	100	92.931	ENSPPRG00000003424	TRMT13	100	96.330	Panthera_pardus
ENSSTOG00000013483	TRMT13	100	92.931	ENSPTIG00000018598	TRMT13	100	96.330	Panthera_tigris_altaica
ENSSTOG00000013483	TRMT13	100	92.723	ENSPTRG00000001001	TRMT13	100	92.723	Pan_troglodytes
ENSSTOG00000013483	TRMT13	100	93.971	ENSPANG00000007598	TRMT13	100	94.495	Papio_anubis
ENSSTOG00000013483	TRMT13	96	55.338	ENSPKIG00000001514	trmt13	97	55.338	Paramormyrops_kingsleyae
ENSSTOG00000013483	TRMT13	87	70.024	ENSPSIG00000012703	TRMT13	99	70.024	Pelodiscus_sinensis
ENSSTOG00000013483	TRMT13	95	51.627	ENSPMGG00000013298	trmt13	93	51.627	Periophthalmus_magnuspinnatus
ENSSTOG00000013483	TRMT13	100	84.792	ENSPEMG00000000275	Trmt13	99	84.792	Peromyscus_maniculatus_bairdii
ENSSTOG00000013483	TRMT13	95	45.188	ENSPMAG00000000823	trmt13	97	45.188	Petromyzon_marinus
ENSSTOG00000013483	TRMT13	98	77.474	ENSPCIG00000007699	TRMT13	99	78.105	Phascolarctos_cinereus
ENSSTOG00000013483	TRMT13	99	48.852	ENSPFOG00000008675	trmt13	99	48.852	Poecilia_formosa
ENSSTOG00000013483	TRMT13	95	48.936	ENSPLAG00000009709	trmt13	99	48.936	Poecilia_latipinna
ENSSTOG00000013483	TRMT13	95	47.974	ENSPMEG00000022954	trmt13	99	47.974	Poecilia_mexicana
ENSSTOG00000013483	TRMT13	77	50.524	ENSPREG00000005645	trmt13	91	50.719	Poecilia_reticulata
ENSSTOG00000013483	TRMT13	100	93.139	ENSPPYG00000001120	TRMT13	100	93.139	Pongo_abelii
ENSSTOG00000013483	TRMT13	99	89.474	ENSPCAG00000002340	TRMT13	99	89.474	Procavia_capensis
ENSSTOG00000013483	TRMT13	100	93.971	ENSPCOG00000017984	TRMT13	100	94.495	Propithecus_coquereli
ENSSTOG00000013483	TRMT13	100	92.723	ENSPVAG00000017430	TRMT13	100	92.723	Pteropus_vampyrus
ENSSTOG00000013483	TRMT13	96	50.847	ENSPNYG00000013690	trmt13	99	50.847	Pundamilia_nyererei
ENSSTOG00000013483	TRMT13	98	54.832	ENSPNAG00000022130	trmt13	100	54.832	Pygocentrus_nattereri
ENSSTOG00000013483	TRMT13	99	86.583	ENSRNOG00000015140	Trmt13	96	86.583	Rattus_norvegicus
ENSSTOG00000013483	TRMT13	100	94.179	ENSRBIG00000037686	TRMT13	100	94.495	Rhinopithecus_bieti
ENSSTOG00000013483	TRMT13	100	94.179	ENSRROG00000044057	TRMT13	100	94.495	Rhinopithecus_roxellana
ENSSTOG00000013483	TRMT13	100	93.763	ENSSBOG00000026541	TRMT13	100	94.495	Saimiri_boliviensis_boliviensis
ENSSTOG00000013483	TRMT13	91	77.574	ENSSHAG00000005213	TRMT13	97	77.574	Sarcophilus_harrisii
ENSSTOG00000013483	TRMT13	95	54.565	ENSSFOG00015017560	trmt13	97	54.565	Scleropages_formosus
ENSSTOG00000013483	TRMT13	95	50.318	ENSSMAG00000014592	trmt13	95	50.318	Scophthalmus_maximus
ENSSTOG00000013483	TRMT13	95	49.789	ENSSDUG00000015508	trmt13	97	49.275	Seriola_dumerili
ENSSTOG00000013483	TRMT13	95	50.000	ENSSLDG00000019060	trmt13	95	50.000	Seriola_lalandi_dorsalis
ENSSTOG00000013483	TRMT13	98	77.966	ENSSARG00000010344	TRMT13	99	77.966	Sorex_araneus
ENSSTOG00000013483	TRMT13	95	68.709	ENSSPUG00000016339	TRMT13	99	68.709	Sphenodon_punctatus
ENSSTOG00000013483	TRMT13	95	51.613	ENSSPAG00000011922	trmt13	98	51.599	Stegastes_partitus
ENSSTOG00000013483	TRMT13	100	92.723	ENSSSCG00000006869	TRMT13	100	92.723	Sus_scrofa
ENSSTOG00000013483	TRMT13	95	67.031	ENSTGUG00000005253	TRMT13	98	67.031	Taeniopygia_guttata
ENSSTOG00000013483	TRMT13	97	48.745	ENSTRUG00000008400	trmt13	99	48.745	Takifugu_rubripes
ENSSTOG00000013483	TRMT13	86	75.721	ENSTBEG00000008911	TRMT13	100	75.721	Tupaia_belangeri
ENSSTOG00000013483	TRMT13	51	98.684	ENSTTRG00000015302	-	60	98.684	Tursiops_truncatus
ENSSTOG00000013483	TRMT13	100	86.071	ENSUAMG00000017251	TRMT13	100	86.071	Ursus_americanus
ENSSTOG00000013483	TRMT13	100	91.060	ENSUMAG00000007901	TRMT13	100	91.060	Ursus_maritimus
ENSSTOG00000013483	TRMT13	90	75.174	ENSVPAG00000001034	TRMT13	100	75.174	Vicugna_pacos
ENSSTOG00000013483	TRMT13	99	92.100	ENSVVUG00000021996	TRMT13	99	92.100	Vulpes_vulpes
ENSSTOG00000013483	TRMT13	98	55.864	ENSXETG00000013204	trmt13	97	55.864	Xenopus_tropicalis
ENSSTOG00000013483	TRMT13	95	48.734	ENSXMAG00000010765	trmt13	99	48.734	Xiphophorus_maculatus