EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSTOG00000013528 (Gene tree)
Gene ID: 101968786
Gene Symbol: -
Alias: -
Full Name: RNA 3'-terminal phosphate cyclase
Gene Type: protein_coding
Species: Ictidomys_tridecemlineatus
Status: putative
Strand: Plus strand
Length: 25734 bases
Position: chrJH393558.1:394223-419956
Accession: 101968786
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSTOP00000029020	RTC	PF01137.21	6.2e-68	1	1
ENSSTOP00000012130	RTC	PF01137.21	2.8e-67	1	1
ENSSTOP00000012130	RTC_insert	PF05189.13	5.6e-25	1	1
ENSSTOP00000029020	RTC_insert	PF05189.13	6.6e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSTOT00000032916	-	1062	-	ENSSTOP00000029020	353 (aa)	-	A0A287D669
ENSSTOT00000013535	-	1026	XM_005339686	ENSSTOP00000012130	341 (aa)	XP_005339743	I3ML68

Gene Model

Click here to download ENSSTOG00000013528's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSTOG00000013528's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSTOG00000013528	-	100	80.926	ENSSTOG00000033099	-	100	80.926

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSTOG00000013528	-	100	88.251	ENSG00000137996	RTCA	100	88.251	Homo_sapiens
ENSSTOG00000013528	-	99	67.036	ENSAPOG00000001345	rtca	98	67.036	Acanthochromis_polyacanthus
ENSSTOG00000013528	-	79	94.424	ENSAMEG00000008855	RTCA	100	94.424	Ailuropoda_melanoleuca
ENSSTOG00000013528	-	99	67.590	ENSACIG00000019643	rtca	99	67.590	Amphilophus_citrinellus
ENSSTOG00000013528	-	100	66.393	ENSAOCG00000014979	rtca	99	66.393	Amphiprion_ocellaris
ENSSTOG00000013528	-	100	66.393	ENSAPEG00000006945	rtca	99	66.393	Amphiprion_percula
ENSSTOG00000013528	-	100	66.301	ENSATEG00000006315	rtca	100	66.301	Anabas_testudineus
ENSSTOG00000013528	-	93	82.390	ENSAPLG00000015430	RTCA	90	82.390	Anas_platyrhynchos
ENSSTOG00000013528	-	100	87.432	ENSANAG00000025446	RTCA	100	87.432	Aotus_nancymaae
ENSSTOG00000013528	-	100	65.574	ENSACLG00000020770	rtca	99	65.574	Astatotilapia_calliptera
ENSSTOG00000013528	-	100	67.213	ENSAMXG00000043271	rtca	100	67.213	Astyanax_mexicanus
ENSSTOG00000013528	-	100	87.978	ENSBTAG00000006321	RTCA	100	87.978	Bos_taurus
ENSSTOG00000013528	-	100	87.705	ENSCJAG00000003398	RTCA	100	87.705	Callithrix_jacchus
ENSSTOG00000013528	-	100	88.251	ENSCAFG00000020010	RTCA	68	88.251	Canis_familiaris
ENSSTOG00000013528	-	100	88.251	ENSCAFG00020011528	RTCA	57	88.251	Canis_lupus_dingo
ENSSTOG00000013528	-	100	87.705	ENSCHIG00000018937	RTCA	100	87.705	Capra_hircus
ENSSTOG00000013528	-	100	87.432	ENSTSYG00000011305	RTCA	100	87.432	Carlito_syrichta
ENSSTOG00000013528	-	100	87.432	ENSCCAG00000021844	RTCA	100	87.432	Cebus_capucinus
ENSSTOG00000013528	-	91	95.146	ENSCATG00000019364	RTCA	100	95.146	Cercocebus_atys
ENSSTOG00000013528	-	93	94.637	ENSCLAG00000006125	RTCA	100	94.637	Chinchilla_lanigera
ENSSTOG00000013528	-	100	88.525	ENSCSAG00000001509	RTCA	100	88.525	Chlorocebus_sabaeus
ENSSTOG00000013528	-	100	87.158	ENSCHOG00000005211	RTCA	100	87.158	Choloepus_hoffmanni
ENSSTOG00000013528	-	100	77.049	ENSCPBG00000026658	RTCA	100	77.049	Chrysemys_picta_bellii
ENSSTOG00000013528	-	98	51.667	ENSCING00000007875	-	98	51.667	Ciona_intestinalis
ENSSTOG00000013528	-	98	51.389	ENSCSAVG00000007269	-	98	51.389	Ciona_savignyi
ENSSTOG00000013528	-	100	88.251	ENSCANG00000040106	RTCA	100	88.251	Colobus_angolensis_palliatus
ENSSTOG00000013528	-	79	91.822	ENSCGRG00001013163	Rtca	85	91.822	Cricetulus_griseus_chok1gshd
ENSSTOG00000013528	-	93	69.497	ENSCSEG00000000530	rtca	96	64.167	Cynoglossus_semilaevis
ENSSTOG00000013528	-	67	76.754	ENSCVAG00000021809	rtca	66	76.754	Cyprinodon_variegatus
ENSSTOG00000013528	-	100	68.579	ENSDARG00000002215	rtca	100	68.579	Danio_rerio
ENSSTOG00000013528	-	100	87.978	ENSDNOG00000000456	RTCA	100	87.978	Dasypus_novemcinctus
ENSSTOG00000013528	-	100	85.792	ENSDORG00000005448	Rtca	100	85.792	Dipodomys_ordii
ENSSTOG00000013528	-	99	34.254	FBgn0025630	Rtca	99	34.254	Drosophila_melanogaster
ENSSTOG00000013528	-	95	49.718	ENSEBUG00000008556	rtca	97	49.718	Eptatretus_burgeri
ENSSTOG00000013528	-	100	87.705	ENSEASG00005015926	RTCA	100	87.705	Equus_asinus_asinus
ENSSTOG00000013528	-	100	87.705	ENSECAG00000019831	RTCA	100	87.705	Equus_caballus
ENSSTOG00000013528	-	91	76.012	ENSEEUG00000001165	RTCA	100	76.012	Erinaceus_europaeus
ENSSTOG00000013528	-	93	72.327	ENSELUG00000003741	rtca	99	66.205	Esox_lucius
ENSSTOG00000013528	-	100	88.251	ENSFCAG00000024460	RTCA	100	88.251	Felis_catus
ENSSTOG00000013528	-	93	75.000	ENSFALG00000002443	RTCA	91	75.000	Ficedula_albicollis
ENSSTOG00000013528	-	100	88.798	ENSFDAG00000012070	-	100	88.798	Fukomys_damarensis
ENSSTOG00000013528	-	98	68.508	ENSFDAG00000016084	-	100	68.508	Fukomys_damarensis
ENSSTOG00000013528	-	73	62.903	ENSFHEG00000002868	rtca	90	71.635	Fundulus_heteroclitus
ENSSTOG00000013528	-	100	64.754	ENSGMOG00000013264	rtca	100	64.754	Gadus_morhua
ENSSTOG00000013528	-	100	76.776	ENSGALG00000005277	RTCA	100	76.776	Gallus_gallus
ENSSTOG00000013528	-	100	66.393	ENSGAFG00000011853	rtca	99	66.393	Gambusia_affinis
ENSSTOG00000013528	-	100	65.027	ENSGACG00000013497	rtca	100	65.027	Gasterosteus_aculeatus
ENSSTOG00000013528	-	72	83.265	ENSGAGG00000023306	RTCA	100	75.427	Gopherus_agassizii
ENSSTOG00000013528	-	100	88.251	ENSGGOG00000009546	-	100	95.146	Gorilla_gorilla
ENSSTOG00000013528	-	100	87.432	ENSGGOG00000044018	-	100	87.432	Gorilla_gorilla
ENSSTOG00000013528	-	100	65.301	ENSHBUG00000002114	rtca	99	65.301	Haplochromis_burtoni
ENSSTOG00000013528	-	100	87.158	ENSHGLG00000002617	RTCA	100	87.158	Heterocephalus_glaber_female
ENSSTOG00000013528	-	100	87.158	ENSHGLG00100006056	RTCA	100	87.158	Heterocephalus_glaber_male
ENSSTOG00000013528	-	100	59.016	ENSHCOG00000020628	rtca	88	59.557	Hippocampus_comes
ENSSTOG00000013528	-	100	67.486	ENSIPUG00000024803	rtca	100	67.486	Ictalurus_punctatus
ENSSTOG00000013528	-	100	60.109	ENSJJAG00000016178	Rtca	100	60.109	Jaculus_jaculus
ENSSTOG00000013528	-	99	66.759	ENSKMAG00000006651	rtca	98	66.759	Kryptolebias_marmoratus
ENSSTOG00000013528	-	99	65.374	ENSLBEG00000028971	rtca	99	65.374	Labrus_bergylta
ENSSTOG00000013528	-	93	70.440	ENSLBEG00000002448	-	99	70.219	Labrus_bergylta
ENSSTOG00000013528	-	100	72.404	ENSLACG00000013666	RTCA	100	72.404	Latimeria_chalumnae
ENSSTOG00000013528	-	100	67.760	ENSLOCG00000000093	rtca	99	67.760	Lepisosteus_oculatus
ENSSTOG00000013528	-	100	87.158	ENSLAFG00000001473	RTCA	100	87.158	Loxodonta_africana
ENSSTOG00000013528	-	100	88.525	ENSMFAG00000034132	RTCA	100	88.525	Macaca_fascicularis
ENSSTOG00000013528	-	100	87.978	ENSMMUG00000019105	RTCA	100	87.978	Macaca_mulatta
ENSSTOG00000013528	-	91	95.469	ENSMNEG00000037163	RTCA	100	95.469	Macaca_nemestrina
ENSSTOG00000013528	-	100	71.585	ENSMLEG00000042151	RTCA	100	71.585	Mandrillus_leucophaeus
ENSSTOG00000013528	-	100	67.760	ENSMAMG00000016536	rtca	100	67.760	Mastacembelus_armatus
ENSSTOG00000013528	-	100	65.574	ENSMZEG00005017945	rtca	99	65.574	Maylandia_zebra
ENSSTOG00000013528	-	93	81.447	ENSMGAG00000006892	RTCA	99	81.447	Meleagris_gallopavo
ENSSTOG00000013528	-	100	84.699	ENSMAUG00000008488	Rtca	100	84.699	Mesocricetus_auratus
ENSSTOG00000013528	-	91	96.117	ENSMICG00000008643	RTCA	100	96.117	Microcebus_murinus
ENSSTOG00000013528	-	100	85.246	ENSMOCG00000016660	Rtca	100	85.246	Microtus_ochrogaster
ENSSTOG00000013528	-	91	72.492	ENSMMOG00000007750	rtca	100	72.492	Mola_mola
ENSSTOG00000013528	-	100	83.333	ENSMODG00000003557	RTCA	100	83.333	Monodelphis_domestica
ENSSTOG00000013528	-	100	67.486	ENSMALG00000020844	rtca	100	67.486	Monopterus_albus
ENSSTOG00000013528	-	100	84.153	MGP_CAROLIEiJ_G0025565	Rtca	100	90.141	Mus_caroli
ENSSTOG00000013528	-	100	83.607	ENSMUSG00000000339	Rtca	100	90.141	Mus_musculus
ENSSTOG00000013528	-	100	83.880	MGP_PahariEiJ_G0027011	Rtca	100	89.437	Mus_pahari
ENSSTOG00000013528	-	100	83.880	MGP_SPRETEiJ_G0026515	Rtca	100	89.437	Mus_spretus
ENSSTOG00000013528	-	100	88.525	ENSMPUG00000012119	RTCA	100	88.525	Mustela_putorius_furo
ENSSTOG00000013528	-	100	82.514	ENSMLUG00000009922	RTCA	100	82.514	Myotis_lucifugus
ENSSTOG00000013528	-	100	84.973	ENSNGAG00000011540	Rtca	99	84.973	Nannospalax_galili
ENSSTOG00000013528	-	100	65.574	ENSNBRG00000003062	rtca	99	65.574	Neolamprologus_brichardi
ENSSTOG00000013528	-	100	88.525	ENSNLEG00000031426	RTCA	100	88.525	Nomascus_leucogenys
ENSSTOG00000013528	-	56	95.122	ENSMEUG00000010030	-	77	75.758	Notamacropus_eugenii
ENSSTOG00000013528	-	79	88.848	ENSOPRG00000012092	RTCA	71	88.848	Ochotona_princeps
ENSSTOG00000013528	-	93	94.340	ENSODEG00000006990	RTCA	96	88.034	Octodon_degus
ENSSTOG00000013528	-	100	65.301	ENSONIG00000007753	rtca	99	65.301	Oreochromis_niloticus
ENSSTOG00000013528	-	93	87.382	ENSOANG00000012055	RTCA	98	87.382	Ornithorhynchus_anatinus
ENSSTOG00000013528	-	100	89.071	ENSOCUG00000014247	RTCA	100	89.071	Oryctolagus_cuniculus
ENSSTOG00000013528	-	100	66.393	ENSORLG00000013605	rtca	100	66.393	Oryzias_latipes
ENSSTOG00000013528	-	100	66.393	ENSORLG00020001904	rtca	100	66.393	Oryzias_latipes_hni
ENSSTOG00000013528	-	100	66.393	ENSORLG00015021064	rtca	100	66.393	Oryzias_latipes_hsok
ENSSTOG00000013528	-	100	67.213	ENSOMEG00000000756	rtca	100	67.213	Oryzias_melastigma
ENSSTOG00000013528	-	100	79.292	ENSOGAG00000005627	RTCA	100	79.235	Otolemur_garnettii
ENSSTOG00000013528	-	93	93.711	ENSOARG00000018122	RTCA	100	93.711	Ovis_aries
ENSSTOG00000013528	-	91	94.822	ENSPPAG00000035119	RTCA	100	94.822	Pan_paniscus
ENSSTOG00000013528	-	100	88.251	ENSPPRG00000000350	RTCA	100	88.251	Panthera_pardus
ENSSTOG00000013528	-	100	87.978	ENSPTIG00000012816	RTCA	100	87.978	Panthera_tigris_altaica
ENSSTOG00000013528	-	91	94.822	ENSPTRG00000001004	RTCA	100	94.822	Pan_troglodytes
ENSSTOG00000013528	-	100	88.525	ENSPANG00000000346	RTCA	100	88.525	Papio_anubis
ENSSTOG00000013528	-	100	69.126	ENSPKIG00000001653	rtca	100	69.126	Paramormyrops_kingsleyae
ENSSTOG00000013528	-	100	77.596	ENSPSIG00000011408	RTCA	100	77.596	Pelodiscus_sinensis
ENSSTOG00000013528	-	100	84.973	ENSPEMG00000018582	Rtca	100	84.973	Peromyscus_maniculatus_bairdii
ENSSTOG00000013528	-	99	54.420	ENSPMAG00000009110	rtca	98	54.420	Petromyzon_marinus
ENSSTOG00000013528	-	100	83.880	ENSPCIG00000007684	RTCA	100	83.880	Phascolarctos_cinereus
ENSSTOG00000013528	-	94	72.981	ENSPFOG00000004824	rtca	100	66.757	Poecilia_formosa
ENSSTOG00000013528	-	100	66.940	ENSPLAG00000011753	rtca	99	66.940	Poecilia_latipinna
ENSSTOG00000013528	-	100	66.940	ENSPMEG00000020469	rtca	99	66.940	Poecilia_mexicana
ENSSTOG00000013528	-	100	67.760	ENSPREG00000001365	rtca	99	67.760	Poecilia_reticulata
ENSSTOG00000013528	-	100	88.251	ENSPPYG00000001115	RTCA	100	88.251	Pongo_abelii
ENSSTOG00000013528	-	100	83.880	ENSPCAG00000005076	RTCA	100	83.880	Procavia_capensis
ENSSTOG00000013528	-	100	89.617	ENSPCOG00000005603	RTCA	100	89.617	Propithecus_coquereli
ENSSTOG00000013528	-	100	83.641	ENSPVAG00000009478	RTCA	100	83.641	Pteropus_vampyrus
ENSSTOG00000013528	-	100	65.574	ENSPNYG00000004722	rtca	99	65.574	Pundamilia_nyererei
ENSSTOG00000013528	-	100	67.486	ENSPNAG00000022270	rtca	100	67.486	Pygocentrus_nattereri
ENSSTOG00000013528	-	100	84.153	ENSRNOG00000014575	Rtca	100	84.153	Rattus_norvegicus
ENSSTOG00000013528	-	91	94.498	ENSRBIG00000041180	RTCA	100	94.498	Rhinopithecus_bieti
ENSSTOG00000013528	-	100	87.705	ENSRROG00000024929	RTCA	100	87.705	Rhinopithecus_roxellana
ENSSTOG00000013528	-	100	86.339	ENSSBOG00000028626	RTCA	100	86.339	Saimiri_boliviensis_boliviensis
ENSSTOG00000013528	-	100	83.880	ENSSHAG00000001758	RTCA	100	83.880	Sarcophilus_harrisii
ENSSTOG00000013528	-	93	70.755	ENSSMAG00000014680	rtca	97	65.000	Scophthalmus_maximus
ENSSTOG00000013528	-	93	72.327	ENSSDUG00000015585	rtca	97	66.944	Seriola_dumerili
ENSSTOG00000013528	-	93	72.013	ENSSLDG00000018985	rtca	86	72.013	Seriola_lalandi_dorsalis
ENSSTOG00000013528	-	93	86.751	ENSSARG00000013993	RTCA	100	86.751	Sorex_araneus
ENSSTOG00000013528	-	100	65.574	ENSSPAG00000011938	rtca	99	65.574	Stegastes_partitus
ENSSTOG00000013528	-	100	87.705	ENSSSCG00000006865	RTCA	100	87.705	Sus_scrofa
ENSSTOG00000013528	-	100	77.049	ENSTGUG00000005154	RTCA	100	77.049	Taeniopygia_guttata
ENSSTOG00000013528	-	100	66.667	ENSTRUG00000008799	rtca	100	66.667	Takifugu_rubripes
ENSSTOG00000013528	-	100	67.213	ENSTNIG00000004725	rtca	100	67.213	Tetraodon_nigroviridis
ENSSTOG00000013528	-	58	65.546	ENSTBEG00000000943	RTCA	82	65.546	Tupaia_belangeri
ENSSTOG00000013528	-	100	83.377	ENSTTRG00000015327	RTCA	100	83.377	Tursiops_truncatus
ENSSTOG00000013528	-	93	85.714	ENSUAMG00000017265	RTCA	96	85.714	Ursus_americanus
ENSSTOG00000013528	-	100	87.705	ENSUMAG00000007881	RTCA	100	87.705	Ursus_maritimus
ENSSTOG00000013528	-	93	85.804	ENSVPAG00000001039	RTCA	84	85.804	Vicugna_pacos
ENSSTOG00000013528	-	100	87.978	ENSVVUG00000022041	RTCA	68	87.978	Vulpes_vulpes
ENSSTOG00000013528	-	99	58.856	ENSXETG00000031661	RTCA	99	58.856	Xenopus_tropicalis
ENSSTOG00000013528	-	100	57.377	ENSXCOG00000008002	rtca	100	57.377	Xiphophorus_couchianus
ENSSTOG00000013528	-	100	66.667	ENSXMAG00000005482	rtca	99	66.667	Xiphophorus_maculatus