EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSTOG00000013638 (Gene tree)
Gene ID: 101969489
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ictidomys_tridecemlineatus
Status: putative
Strand: Minus strand
Length: 68125 bases
Position: chrJH393380.1:2947425-3015549
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSTOP00000012242	TUDOR	PF00567.24	2.9e-29	1	2
ENSSTOP00000012242	TUDOR	PF00567.24	2.9e-29	2	2
ENSSTOP00000025141	TUDOR	PF00567.24	8.7e-21	1	1
ENSSTOP00000026413	TUDOR	PF00567.24	1.8e-11	1	1
ENSSTOP00000012242	DEAD	PF00270.29	2.3e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSTOT00000038113	-	1227	-	ENSSTOP00000025141	408 (aa)	-	A0A287CV42
ENSSTOT00000013663	-	3564	XM_005330674	ENSSTOP00000012242	1187 (aa)	-	I3MLF8
ENSSTOT00000040840	-	1068	-	ENSSTOP00000026413	355 (aa)	-	A0A287CYR5

Gene Model

Click here to download ENSSTOG00000013638's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSTOG00000013638's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSTOG00000013638	-	71	42.994	ENSAPOG00000006421	tdrd12	82	42.994	Acanthochromis_polyacanthus
ENSSTOG00000013638	-	62	86.520	ENSAMEG00000015440	-	100	80.000	Ailuropoda_melanoleuca
ENSSTOG00000013638	-	91	41.438	ENSACIG00000021652	tdrd12	89	43.653	Amphilophus_citrinellus
ENSSTOG00000013638	-	81	40.411	ENSAOCG00000016463	tdrd12	78	40.068	Amphiprion_ocellaris
ENSSTOG00000013638	-	81	44.863	ENSAPEG00000015105	tdrd12	81	45.205	Amphiprion_percula
ENSSTOG00000013638	-	70	43.648	ENSATEG00000011608	tdrd12	82	43.648	Anabas_testudineus
ENSSTOG00000013638	-	82	60.952	ENSAPLG00000011417	-	92	60.952	Anas_platyrhynchos
ENSSTOG00000013638	-	69	53.474	ENSACAG00000029615	-	87	53.333	Anolis_carolinensis
ENSSTOG00000013638	-	98	77.674	ENSANAG00000023166	-	99	77.665	Aotus_nancymaae
ENSSTOG00000013638	-	81	45.752	ENSAMXG00000013811	tdrd12	88	48.797	Astyanax_mexicanus
ENSSTOG00000013638	-	92	84.709	ENSBTAG00000019266	TDRD12	98	84.709	Bos_taurus
ENSSTOG00000013638	-	98	77.674	ENSCJAG00000000763	-	99	77.919	Callithrix_jacchus
ENSSTOG00000013638	-	98	86.466	ENSCAFG00000007505	TDRD12	99	78.736	Canis_familiaris
ENSSTOG00000013638	-	97	80.471	ENSCAFG00020019790	-	92	80.197	Canis_lupus_dingo
ENSSTOG00000013638	-	96	78.014	ENSTSYG00000012034	-	99	78.238	Carlito_syrichta
ENSSTOG00000013638	-	99	84.181	ENSCPOG00000002876	-	99	84.181	Cavia_porcellus
ENSSTOG00000013638	-	98	68.677	ENSCCAG00000037592	-	91	74.286	Cebus_capucinus
ENSSTOG00000013638	-	85	76.410	ENSCATG00000038627	-	91	76.410	Cercocebus_atys
ENSSTOG00000013638	-	99	80.000	ENSCLAG00000012138	-	93	80.000	Chinchilla_lanigera
ENSSTOG00000013638	-	97	78.454	ENSCSAG00000004794	-	91	79.656	Chlorocebus_sabaeus
ENSSTOG00000013638	-	69	92.308	ENSCHOG00000009768	-	51	93.023	Choloepus_hoffmanni
ENSSTOG00000013638	-	87	66.242	ENSCPBG00000000147	-	90	66.242	Chrysemys_picta_bellii
ENSSTOG00000013638	-	98	77.674	ENSCANG00000040785	-	99	77.411	Colobus_angolensis_palliatus
ENSSTOG00000013638	-	99	83.292	ENSCGRG00001021407	-	99	83.292	Cricetulus_griseus_chok1gshd
ENSSTOG00000013638	-	99	80.299	ENSCGRG00000007286	-	100	80.299	Cricetulus_griseus_crigri
ENSSTOG00000013638	-	70	43.791	ENSCSEG00000001744	-	65	43.791	Cynoglossus_semilaevis
ENSSTOG00000013638	-	61	40.274	ENSCVAG00000004277	tdrd12	91	40.274	Cyprinodon_variegatus
ENSSTOG00000013638	-	90	45.066	ENSDARG00000075217	tdrd12	93	37.255	Danio_rerio
ENSSTOG00000013638	-	99	81.071	ENSDNOG00000017244	-	93	80.899	Dasypus_novemcinctus
ENSSTOG00000013638	-	99	76.007	ENSDORG00000012134	-	100	75.934	Dipodomys_ordii
ENSSTOG00000013638	-	73	81.457	ENSETEG00000015088	-	71	80.537	Echinops_telfairi
ENSSTOG00000013638	-	99	80.344	ENSEASG00005021053	-	98	76.689	Equus_asinus_asinus
ENSSTOG00000013638	-	71	93.478	ENSEEUG00000008457	-	84	88.776	Erinaceus_europaeus
ENSSTOG00000013638	-	94	37.199	ENSELUG00000017494	tdrd12	93	41.262	Esox_lucius
ENSSTOG00000013638	-	100	43.070	ENSFALG00000000259	-	94	43.066	Ficedula_albicollis
ENSSTOG00000013638	-	100	82.254	ENSFDAG00000014797	-	99	82.254	Fukomys_damarensis
ENSSTOG00000013638	-	89	50.896	ENSGALG00000004704	-	95	50.896	Gallus_gallus
ENSSTOG00000013638	-	88	43.068	ENSGAFG00000003729	tdrd12	75	43.068	Gambusia_affinis
ENSSTOG00000013638	-	90	67.949	ENSGAGG00000000247	-	88	67.949	Gopherus_agassizii
ENSSTOG00000013638	-	98	77.726	ENSGGOG00000011938	-	99	77.665	Gorilla_gorilla
ENSSTOG00000013638	-	68	45.695	ENSHBUG00000020426	tdrd12	81	45.695	Haplochromis_burtoni
ENSSTOG00000013638	-	100	84.559	ENSHGLG00000015608	-	100	84.559	Heterocephalus_glaber_female
ENSSTOG00000013638	-	95	73.925	ENSHGLG00100008227	-	90	86.834	Heterocephalus_glaber_male
ENSSTOG00000013638	-	84	42.900	ENSIPUG00000016825	tdrd12	78	42.900	Ictalurus_punctatus
ENSSTOG00000013638	-	54	46.332	ENSKMAG00000008031	tdrd12	74	46.332	Kryptolebias_marmoratus
ENSSTOG00000013638	-	78	43.836	ENSLBEG00000005601	tdrd12	89	43.836	Labrus_bergylta
ENSSTOG00000013638	-	97	43.243	ENSLACG00000010650	-	92	54.140	Latimeria_chalumnae
ENSSTOG00000013638	-	87	43.804	ENSLOCG00000001690	tdrd12	79	43.804	Lepisosteus_oculatus
ENSSTOG00000013638	-	98	78.241	ENSLAFG00000008698	-	92	86.997	Loxodonta_africana
ENSSTOG00000013638	-	98	78.372	ENSMFAG00000044756	-	99	78.426	Macaca_fascicularis
ENSSTOG00000013638	-	99	80.288	ENSMMUG00000015608	-	99	78.680	Macaca_mulatta
ENSSTOG00000013638	-	96	78.487	ENSMNEG00000043067	-	99	78.756	Macaca_nemestrina
ENSSTOG00000013638	-	96	79.147	ENSMLEG00000042036	-	99	79.016	Mandrillus_leucophaeus
ENSSTOG00000013638	-	97	30.882	ENSMAMG00000013867	tdrd12	90	43.366	Mastacembelus_armatus
ENSSTOG00000013638	-	66	46.415	ENSMZEG00005024214	tdrd12	78	46.415	Maylandia_zebra
ENSSTOG00000013638	-	69	50.597	ENSMGAG00000005627	-	100	56.376	Meleagris_gallopavo
ENSSTOG00000013638	-	99	81.172	ENSMAUG00000013767	-	99	81.172	Mesocricetus_auratus
ENSSTOG00000013638	-	98	76.977	ENSMICG00000003623	-	99	82.234	Microcebus_murinus
ENSSTOG00000013638	-	100	80.791	ENSMOCG00000002366	-	100	80.791	Microtus_ochrogaster
ENSSTOG00000013638	-	80	44.528	ENSMMOG00000018662	tdrd12	82	44.805	Mola_mola
ENSSTOG00000013638	-	97	70.762	ENSMODG00000012286	-	94	70.762	Monodelphis_domestica
ENSSTOG00000013638	-	73	42.904	ENSMALG00000006918	tdrd12	81	38.537	Monopterus_albus
ENSSTOG00000013638	-	100	80.147	MGP_CAROLIEiJ_G0029587	-	100	86.765	Mus_caroli
ENSSTOG00000013638	-	100	80.882	MGP_PahariEiJ_G0012821	-	100	86.765	Mus_pahari
ENSSTOG00000013638	-	100	81.127	MGP_SPRETEiJ_G0030686	-	100	88.235	Mus_spretus
ENSSTOG00000013638	-	99	78.072	ENSMPUG00000007791	-	93	78.072	Mustela_putorius_furo
ENSSTOG00000013638	-	96	79.669	ENSMLUG00000010694	-	99	82.330	Myotis_lucifugus
ENSSTOG00000013638	-	100	82.254	ENSNGAG00000000793	-	99	82.254	Nannospalax_galili
ENSSTOG00000013638	-	50	45.364	ENSNBRG00000017878	-	83	45.364	Neolamprologus_brichardi
ENSSTOG00000013638	-	98	66.435	ENSNLEG00000007635	-	91	75.321	Nomascus_leucogenys
ENSSTOG00000013638	-	51	87.975	ENSMEUG00000014059	-	53	88.889	Notamacropus_eugenii
ENSSTOG00000013638	-	98	64.884	ENSOPRG00000015809	-	84	73.381	Ochotona_princeps
ENSSTOG00000013638	-	100	81.690	ENSODEG00000014443	-	100	81.690	Octodon_degus
ENSSTOG00000013638	-	94	34.644	ENSONIG00000010630	tdrd12	90	46.689	Oreochromis_niloticus
ENSSTOG00000013638	-	98	60.197	ENSOANG00000029442	-	97	60.885	Ornithorhynchus_anatinus
ENSSTOG00000013638	-	97	86.076	ENSOCUG00000016911	-	99	79.605	Oryctolagus_cuniculus
ENSSTOG00000013638	-	73	43.791	ENSORLG00000027859	tdrd12	79	40.415	Oryzias_latipes
ENSSTOG00000013638	-	88	43.648	ENSORLG00015020835	tdrd12	73	43.648	Oryzias_latipes_hsok
ENSSTOG00000013638	-	77	43.648	ENSOMEG00000021862	tdrd12	88	43.648	Oryzias_melastigma
ENSSTOG00000013638	-	97	78.353	ENSOGAG00000001571	-	91	87.107	Otolemur_garnettii
ENSSTOG00000013638	-	98	84.461	ENSOARG00000004254	-	93	83.886	Ovis_aries
ENSSTOG00000013638	-	97	72.941	ENSPPAG00000042284	-	99	76.904	Pan_paniscus
ENSSTOG00000013638	-	98	75.058	ENSPPRG00000002389	-	100	79.747	Panthera_pardus
ENSSTOG00000013638	-	97	70.118	ENSPTRG00000010795	TDRD12	91	76.410	Pan_troglodytes
ENSSTOG00000013638	-	98	78.654	ENSPANG00000001203	-	93	90.594	Papio_anubis
ENSSTOG00000013638	-	89	43.620	ENSPKIG00000006407	tdrd12	75	43.620	Paramormyrops_kingsleyae
ENSSTOG00000013638	-	99	57.531	ENSPSIG00000012970	-	100	68.812	Pelodiscus_sinensis
ENSSTOG00000013638	-	70	43.599	ENSPMGG00000022691	tdrd12	83	43.599	Periophthalmus_magnuspinnatus
ENSSTOG00000013638	-	100	83.380	ENSPEMG00000009233	-	100	83.380	Peromyscus_maniculatus_bairdii
ENSSTOG00000013638	-	99	68.088	ENSPCIG00000020993	-	93	68.088	Phascolarctos_cinereus
ENSSTOG00000013638	-	83	44.136	ENSPFOG00000008184	tdrd12	71	44.136	Poecilia_formosa
ENSSTOG00000013638	-	55	55.556	ENSPMEG00000006420	tdrd12	82	55.556	Poecilia_mexicana
ENSSTOG00000013638	-	65	46.104	ENSPREG00000004916	tdrd12	68	46.104	Poecilia_reticulata
ENSSTOG00000013638	-	98	77.958	ENSPPYG00000009821	-	92	79.571	Pongo_abelii
ENSSTOG00000013638	-	96	66.351	ENSPCAG00000013510	-	77	71.963	Procavia_capensis
ENSSTOG00000013638	-	98	71.163	ENSPCOG00000023600	-	99	76.904	Propithecus_coquereli
ENSSTOG00000013638	-	80	95.876	ENSPVAG00000014599	-	83	88.485	Pteropus_vampyrus
ENSSTOG00000013638	-	68	46.026	ENSPNYG00000022866	tdrd12	79	46.026	Pundamilia_nyererei
ENSSTOG00000013638	-	68	46.441	ENSPNAG00000003413	tdrd12	77	46.441	Pygocentrus_nattereri
ENSSTOG00000013638	-	99	80.692	ENSRNOG00000012719	Tdrd12	93	80.692	Rattus_norvegicus
ENSSTOG00000013638	-	97	67.164	ENSRBIG00000019899	-	91	75.821	Rhinopithecus_bieti
ENSSTOG00000013638	-	98	77.262	ENSRROG00000036351	-	99	77.157	Rhinopithecus_roxellana
ENSSTOG00000013638	-	98	78.190	ENSSBOG00000034916	-	99	78.680	Saimiri_boliviensis_boliviensis
ENSSTOG00000013638	-	97	65.217	ENSSHAG00000002599	-	91	74.295	Sarcophilus_harrisii
ENSSTOG00000013638	-	66	46.444	ENSSFOG00015000297	tdrd12	72	46.444	Scleropages_formosus
ENSSTOG00000013638	-	82	45.548	ENSSMAG00000002870	tdrd12	89	43.709	Scophthalmus_maximus
ENSSTOG00000013638	-	68	47.508	ENSSDUG00000017304	tdrd12	79	47.508	Seriola_dumerili
ENSSTOG00000013638	-	68	46.512	ENSSLDG00000004415	tdrd12	78	46.512	Seriola_lalandi_dorsalis
ENSSTOG00000013638	-	96	77.143	ENSSARG00000005357	-	91	86.667	Sorex_araneus
ENSSTOG00000013638	-	74	60.121	ENSSPUG00000013174	-	88	60.121	Sphenodon_punctatus
ENSSTOG00000013638	-	78	43.678	ENSSPAG00000005706	tdrd12	77	43.678	Stegastes_partitus
ENSSTOG00000013638	-	75	79.266	ENSSSCG00000002857	-	90	79.266	Sus_scrofa
ENSSTOG00000013638	-	69	41.573	ENSTRUG00000021888	tdrd12	91	41.573	Takifugu_rubripes
ENSSTOG00000013638	-	50	38.350	ENSTNIG00000000465	-	71	44.595	Tetraodon_nigroviridis
ENSSTOG00000013638	-	59	87.037	ENSTBEG00000007609	-	63	87.037	Tupaia_belangeri
ENSSTOG00000013638	-	96	76.485	ENSTTRG00000012206	-	91	86.834	Tursiops_truncatus
ENSSTOG00000013638	-	95	76.303	ENSUAMG00000007298	-	89	80.753	Ursus_americanus
ENSSTOG00000013638	-	95	75.829	ENSUMAG00000014314	-	89	80.375	Ursus_maritimus
ENSSTOG00000013638	-	96	68.646	ENSVPAG00000012051	-	85	81.726	Vicugna_pacos
ENSSTOG00000013638	-	100	79.804	ENSVVUG00000016637	-	93	80.180	Vulpes_vulpes
ENSSTOG00000013638	-	70	42.178	ENSXETG00000031945	-	100	41.808	Xenopus_tropicalis
ENSSTOG00000013638	-	71	47.315	ENSXMAG00000020908	tdrd12	83	47.315	Xiphophorus_maculatus