EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSTOG00000013652 (Gene tree)
Gene ID: 101963635
Gene Symbol: YTHDC1
Alias: KIAA1966|YT521|YT521-B
Full Name: YTH domain containing 1
Gene Type: protein_coding
Species: Ictidomys_tridecemlineatus
Status: putative
Strand: Minus strand
Length: 34851 bases
Position: chrJH393392.1:126736-161586
Accession: 101963635
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSTOP00000030499	YTH	PF04146.15	9.2e-40	1	1
ENSSTOP00000012234	YTH	PF04146.15	9.6e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSTOT00000043176	YTHDC1-202	7500	-	ENSSTOP00000030499	718 (aa)	XP_021586329	A0A287DAD7
ENSSTOT00000013654	YTHDC1-201	7554	XM_005331706	ENSSTOP00000012234	736 (aa)	XP_005331763	I3MLF0

Gene Model

Click here to download ENSSTOG00000013652's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSTOG00000013652's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSTOG00000013652	YTHDC1	100	98.913	ENSG00000083896	YTHDC1	100	100.000	Homo_sapiens
ENSSTOG00000013652	YTHDC1	57	59.338	ENSAPOG00000013997	ythdc1	57	61.827	Acanthochromis_polyacanthus
ENSSTOG00000013652	YTHDC1	100	96.482	ENSAMEG00000005688	YTHDC1	100	96.482	Ailuropoda_melanoleuca
ENSSTOG00000013652	YTHDC1	71	57.647	ENSACIG00000019728	ythdc1	80	59.155	Amphilophus_citrinellus
ENSSTOG00000013652	YTHDC1	57	60.360	ENSAOCG00000000239	ythdc1	59	66.432	Amphiprion_ocellaris
ENSSTOG00000013652	YTHDC1	50	64.420	ENSAPEG00000000618	ythdc1	53	67.409	Amphiprion_percula
ENSSTOG00000013652	YTHDC1	91	83.952	ENSAPLG00000009921	YTHDC1	60	94.848	Anas_platyrhynchos
ENSSTOG00000013652	YTHDC1	93	82.430	ENSACAG00000009697	YTHDC1	59	92.506	Anolis_carolinensis
ENSSTOG00000013652	YTHDC1	100	97.690	ENSANAG00000001522	YTHDC1	100	97.690	Aotus_nancymaae
ENSSTOG00000013652	YTHDC1	57	58.559	ENSACLG00000019371	ythdc1	59	65.169	Astatotilapia_calliptera
ENSSTOG00000013652	YTHDC1	93	63.016	ENSAMXG00000006978	ythdc1	58	78.385	Astyanax_mexicanus
ENSSTOG00000013652	YTHDC1	100	96.336	ENSBTAG00000015572	YTHDC1	100	96.336	Bos_taurus
ENSSTOG00000013652	YTHDC1	100	98.098	ENSCJAG00000009934	YTHDC1	100	98.098	Callithrix_jacchus
ENSSTOG00000013652	YTHDC1	100	96.482	ENSCAFG00000002821	YTHDC1	100	96.482	Canis_familiaris
ENSSTOG00000013652	YTHDC1	100	96.482	ENSCAFG00020027112	YTHDC1	100	96.482	Canis_lupus_dingo
ENSSTOG00000013652	YTHDC1	99	93.239	ENSCHIG00000004810	YTHDC1	98	93.239	Capra_hircus
ENSSTOG00000013652	YTHDC1	100	97.690	ENSTSYG00000011668	YTHDC1	100	97.690	Carlito_syrichta
ENSSTOG00000013652	YTHDC1	90	70.062	ENSCAPG00000008722	YTHDC1	90	68.598	Cavia_aperea
ENSSTOG00000013652	YTHDC1	100	89.946	ENSCPOG00000010929	YTHDC1	100	89.946	Cavia_porcellus
ENSSTOG00000013652	YTHDC1	100	97.826	ENSCCAG00000035754	YTHDC1	100	97.826	Cebus_capucinus
ENSSTOG00000013652	YTHDC1	100	99.049	ENSCATG00000036320	YTHDC1	100	99.049	Cercocebus_atys
ENSSTOG00000013652	YTHDC1	99	97.521	ENSCLAG00000005482	YTHDC1	99	97.521	Chinchilla_lanigera
ENSSTOG00000013652	YTHDC1	100	97.962	ENSCSAG00000005252	YTHDC1	100	97.962	Chlorocebus_sabaeus
ENSSTOG00000013652	YTHDC1	92	85.294	ENSCPBG00000021965	YTHDC1	63	95.082	Chrysemys_picta_bellii
ENSSTOG00000013652	YTHDC1	100	98.098	ENSCANG00000004769	YTHDC1	100	98.098	Colobus_angolensis_palliatus
ENSSTOG00000013652	YTHDC1	100	97.147	ENSCGRG00001000816	Ythdc1	100	97.147	Cricetulus_griseus_chok1gshd
ENSSTOG00000013652	YTHDC1	99	96.011	ENSCGRG00000009807	Ythdc1	99	96.011	Cricetulus_griseus_crigri
ENSSTOG00000013652	YTHDC1	57	59.307	ENSCSEG00000020404	ythdc1	59	65.647	Cynoglossus_semilaevis
ENSSTOG00000013652	YTHDC1	57	58.388	ENSCVAG00000022349	ythdc1	59	64.539	Cyprinodon_variegatus
ENSSTOG00000013652	YTHDC1	93	62.248	ENSDARG00000051953	ythdc1	58	76.867	Danio_rerio
ENSSTOG00000013652	YTHDC1	100	95.658	ENSDNOG00000004949	YTHDC1	100	95.658	Dasypus_novemcinctus
ENSSTOG00000013652	YTHDC1	99	98.624	ENSDORG00000013045	Ythdc1	99	98.624	Dipodomys_ordii
ENSSTOG00000013652	YTHDC1	78	100.000	ENSETEG00000001878	YTHDC1	78	100.000	Echinops_telfairi
ENSSTOG00000013652	YTHDC1	100	96.888	ENSEASG00005018383	YTHDC1	100	96.888	Equus_asinus_asinus
ENSSTOG00000013652	YTHDC1	100	96.482	ENSECAG00000018303	YTHDC1	100	96.482	Equus_caballus
ENSSTOG00000013652	YTHDC1	100	95.387	ENSEEUG00000015466	YTHDC1	100	95.387	Erinaceus_europaeus
ENSSTOG00000013652	YTHDC1	93	60.839	ENSELUG00000014029	ythdc1	57	75.628	Esox_lucius
ENSSTOG00000013652	YTHDC1	100	96.341	ENSFCAG00000026791	YTHDC1	100	96.341	Felis_catus
ENSSTOG00000013652	YTHDC1	68	88.063	ENSFALG00000006581	YTHDC1	87	92.124	Ficedula_albicollis
ENSSTOG00000013652	YTHDC1	99	96.419	ENSFDAG00000018560	YTHDC1	100	96.419	Fukomys_damarensis
ENSSTOG00000013652	YTHDC1	66	58.730	ENSFHEG00000001286	ythdc1	60	55.294	Fundulus_heteroclitus
ENSSTOG00000013652	YTHDC1	63	64.184	ENSGMOG00000018815	ythdc1	78	64.184	Gadus_morhua
ENSSTOG00000013652	YTHDC1	92	84.831	ENSGALG00000035906	YTHDC1	56	94.614	Gallus_gallus
ENSSTOG00000013652	YTHDC1	50	66.548	ENSGAFG00000001759	ythdc1	72	67.176	Gambusia_affinis
ENSSTOG00000013652	YTHDC1	57	62.326	ENSGACG00000015486	ythdc1	57	62.712	Gasterosteus_aculeatus
ENSSTOG00000013652	YTHDC1	93	86.237	ENSGAGG00000007108	YTHDC1	60	96.487	Gopherus_agassizii
ENSSTOG00000013652	YTHDC1	100	99.049	ENSGGOG00000021958	YTHDC1	100	99.049	Gorilla_gorilla
ENSSTOG00000013652	YTHDC1	57	58.559	ENSHBUG00000019288	ythdc1	59	65.169	Haplochromis_burtoni
ENSSTOG00000013652	YTHDC1	100	97.283	ENSHGLG00000006319	-	100	97.283	Heterocephalus_glaber_female
ENSSTOG00000013652	YTHDC1	94	70.461	ENSHGLG00000003239	-	57	77.465	Heterocephalus_glaber_female
ENSSTOG00000013652	YTHDC1	94	69.010	ENSHGLG00100008060	-	57	75.058	Heterocephalus_glaber_male
ENSSTOG00000013652	YTHDC1	99	96.424	ENSHGLG00100001556	-	100	96.424	Heterocephalus_glaber_male
ENSSTOG00000013652	YTHDC1	54	70.213	ENSHCOG00000001520	ythdc1	84	70.213	Hippocampus_comes
ENSSTOG00000013652	YTHDC1	93	66.667	ENSIPUG00000018136	ythdc1	61	82.232	Ictalurus_punctatus
ENSSTOG00000013652	YTHDC1	91	92.273	ENSJJAG00000010268	Ythdc1	93	92.125	Jaculus_jaculus
ENSSTOG00000013652	YTHDC1	57	59.417	ENSKMAG00000006483	ythdc1	85	64.365	Kryptolebias_marmoratus
ENSSTOG00000013652	YTHDC1	64	63.462	ENSLBEG00000020831	ythdc1	72	75.000	Labrus_bergylta
ENSSTOG00000013652	YTHDC1	87	72.910	ENSLACG00000004893	YTHDC1	62	86.574	Latimeria_chalumnae
ENSSTOG00000013652	YTHDC1	93	73.285	ENSLOCG00000003045	ythdc1	90	87.028	Lepisosteus_oculatus
ENSSTOG00000013652	YTHDC1	100	96.739	ENSLAFG00000021592	YTHDC1	100	96.739	Loxodonta_africana
ENSSTOG00000013652	YTHDC1	100	99.185	ENSMFAG00000031927	YTHDC1	100	99.185	Macaca_fascicularis
ENSSTOG00000013652	YTHDC1	100	98.098	ENSMMUG00000002265	YTHDC1	100	99.038	Macaca_mulatta
ENSSTOG00000013652	YTHDC1	100	98.098	ENSMNEG00000033751	YTHDC1	100	98.098	Macaca_nemestrina
ENSSTOG00000013652	YTHDC1	99	99.037	ENSMLEG00000042147	YTHDC1	99	99.037	Mandrillus_leucophaeus
ENSSTOG00000013652	YTHDC1	56	60.706	ENSMAMG00000013122	ythdc1	58	65.574	Mastacembelus_armatus
ENSSTOG00000013652	YTHDC1	57	58.559	ENSMZEG00005023173	ythdc1	59	65.169	Maylandia_zebra
ENSSTOG00000013652	YTHDC1	93	83.455	ENSMGAG00000010391	YTHDC1	59	94.614	Meleagris_gallopavo
ENSSTOG00000013652	YTHDC1	100	96.875	ENSMAUG00000001286	Ythdc1	100	96.875	Mesocricetus_auratus
ENSSTOG00000013652	YTHDC1	100	98.100	ENSMICG00000034640	YTHDC1	100	98.100	Microcebus_murinus
ENSSTOG00000013652	YTHDC1	100	97.147	ENSMOCG00000020201	Ythdc1	100	97.147	Microtus_ochrogaster
ENSSTOG00000013652	YTHDC1	65	56.904	ENSMODG00000009173	-	88	60.427	Monodelphis_domestica
ENSSTOG00000013652	YTHDC1	93	87.537	ENSMODG00000020754	-	92	87.390	Monodelphis_domestica
ENSSTOG00000013652	YTHDC1	87	68.233	ENSMODG00000014337	-	95	68.496	Monodelphis_domestica
ENSSTOG00000013652	YTHDC1	96	51.199	ENSMODG00000010076	-	60	60.377	Monodelphis_domestica
ENSSTOG00000013652	YTHDC1	58	67.797	ENSMALG00000013412	ythdc1	56	67.507	Monopterus_albus
ENSSTOG00000013652	YTHDC1	100	97.151	MGP_CAROLIEiJ_G0027347	Ythdc1	100	97.151	Mus_caroli
ENSSTOG00000013652	YTHDC1	100	97.015	ENSMUSG00000035851	Ythdc1	100	97.015	Mus_musculus
ENSSTOG00000013652	YTHDC1	100	97.422	MGP_PahariEiJ_G0017126	Ythdc1	100	97.422	Mus_pahari
ENSSTOG00000013652	YTHDC1	100	97.286	MGP_SPRETEiJ_G0028339	Ythdc1	100	97.286	Mus_spretus
ENSSTOG00000013652	YTHDC1	93	72.464	ENSMPUG00000001743	YTHDC1	53	96.675	Mustela_putorius_furo
ENSSTOG00000013652	YTHDC1	99	96.143	ENSMLUG00000016300	YTHDC1	100	96.143	Myotis_lucifugus
ENSSTOG00000013652	YTHDC1	59	96.445	ENSNGAG00000024000	Ythdc1	93	96.445	Nannospalax_galili
ENSSTOG00000013652	YTHDC1	59	65.924	ENSNBRG00000007663	ythdc1	70	65.367	Neolamprologus_brichardi
ENSSTOG00000013652	YTHDC1	99	98.212	ENSNLEG00000009202	YTHDC1	99	98.212	Nomascus_leucogenys
ENSSTOG00000013652	YTHDC1	82	79.805	ENSMEUG00000007128	YTHDC1	81	79.805	Notamacropus_eugenii
ENSSTOG00000013652	YTHDC1	75	96.676	ENSOPRG00000008986	YTHDC1	74	96.676	Ochotona_princeps
ENSSTOG00000013652	YTHDC1	100	95.924	ENSODEG00000001715	YTHDC1	100	95.924	Octodon_degus
ENSSTOG00000013652	YTHDC1	93	49.433	ENSONIG00000012651	ythdc1	59	65.618	Oreochromis_niloticus
ENSSTOG00000013652	YTHDC1	88	77.217	ENSOANG00000014398	YTHDC1	55	97.468	Ornithorhynchus_anatinus
ENSSTOG00000013652	YTHDC1	93	81.168	ENSOCUG00000015886	YTHDC1	57	93.842	Oryctolagus_cuniculus
ENSSTOG00000013652	YTHDC1	56	59.953	ENSORLG00000030544	ythdc1	60	65.721	Oryzias_latipes
ENSSTOG00000013652	YTHDC1	92	51.163	ENSORLG00020019316	ythdc1	60	65.721	Oryzias_latipes_hni
ENSSTOG00000013652	YTHDC1	56	60.337	ENSOMEG00000000551	ythdc1	60	64.269	Oryzias_melastigma
ENSSTOG00000013652	YTHDC1	100	96.603	ENSOGAG00000003362	YTHDC1	100	96.603	Otolemur_garnettii
ENSSTOG00000013652	YTHDC1	100	96.336	ENSOARG00000008633	YTHDC1	100	96.336	Ovis_aries
ENSSTOG00000013652	YTHDC1	100	98.913	ENSPPAG00000041315	YTHDC1	100	98.913	Pan_paniscus
ENSSTOG00000013652	YTHDC1	100	97.561	ENSPPRG00000011979	YTHDC1	100	97.561	Panthera_pardus
ENSSTOG00000013652	YTHDC1	99	97.253	ENSPTIG00000015527	YTHDC1	100	97.253	Panthera_tigris_altaica
ENSSTOG00000013652	YTHDC1	100	98.913	ENSPTRG00000016105	YTHDC1	100	98.913	Pan_troglodytes
ENSSTOG00000013652	YTHDC1	100	99.049	ENSPANG00000021590	YTHDC1	100	99.049	Papio_anubis
ENSSTOG00000013652	YTHDC1	93	69.154	ENSPKIG00000018497	ythdc1	83	83.063	Paramormyrops_kingsleyae
ENSSTOG00000013652	YTHDC1	91	85.608	ENSPSIG00000002782	YTHDC1	60	94.848	Pelodiscus_sinensis
ENSSTOG00000013652	YTHDC1	55	55.325	ENSPMGG00000000970	-	72	64.808	Periophthalmus_magnuspinnatus
ENSSTOG00000013652	YTHDC1	99	97.387	ENSPEMG00000013850	Ythdc1	100	96.419	Peromyscus_maniculatus_bairdii
ENSSTOG00000013652	YTHDC1	93	87.390	ENSPCIG00000006870	YTHDC1	92	87.243	Phascolarctos_cinereus
ENSSTOG00000013652	YTHDC1	57	58.482	ENSPFOG00000013404	ythdc1	60	64.387	Poecilia_formosa
ENSSTOG00000013652	YTHDC1	57	58.482	ENSPLAG00000011079	ythdc1	85	64.387	Poecilia_latipinna
ENSSTOG00000013652	YTHDC1	57	58.588	ENSPREG00000016973	ythdc1	59	58.867	Poecilia_reticulata
ENSSTOG00000013652	YTHDC1	87	97.500	ENSPPYG00000014726	YTHDC1	100	97.500	Pongo_abelii
ENSSTOG00000013652	YTHDC1	78	88.630	ENSPCAG00000009607	YTHDC1	77	87.464	Procavia_capensis
ENSSTOG00000013652	YTHDC1	100	94.159	ENSPCOG00000019105	YTHDC1	100	94.159	Propithecus_coquereli
ENSSTOG00000013652	YTHDC1	100	94.459	ENSPVAG00000015551	YTHDC1	100	94.459	Pteropus_vampyrus
ENSSTOG00000013652	YTHDC1	57	58.559	ENSPNYG00000011687	ythdc1	59	65.169	Pundamilia_nyererei
ENSSTOG00000013652	YTHDC1	93	67.330	ENSPNAG00000028365	ythdc1	60	83.599	Pygocentrus_nattereri
ENSSTOG00000013652	YTHDC1	100	96.346	ENSRNOG00000001996	Ythdc1	100	96.346	Rattus_norvegicus
ENSSTOG00000013652	YTHDC1	99	97.937	ENSRBIG00000028279	YTHDC1	99	97.937	Rhinopithecus_bieti
ENSSTOG00000013652	YTHDC1	100	98.098	ENSRROG00000035028	YTHDC1	100	98.098	Rhinopithecus_roxellana
ENSSTOG00000013652	YTHDC1	100	99.185	ENSSBOG00000022353	YTHDC1	100	99.185	Saimiri_boliviensis_boliviensis
ENSSTOG00000013652	YTHDC1	93	86.364	ENSSHAG00000002538	YTHDC1	91	87.221	Sarcophilus_harrisii
ENSSTOG00000013652	YTHDC1	93	67.622	ENSSFOG00015003298	ythdc1	60	84.419	Scleropages_formosus
ENSSTOG00000013652	YTHDC1	57	59.251	ENSSMAG00000009086	ythdc1	60	64.706	Scophthalmus_maximus
ENSSTOG00000013652	YTHDC1	56	59.857	ENSSDUG00000022008	ythdc1	59	66.067	Seriola_dumerili
ENSSTOG00000013652	YTHDC1	56	59.857	ENSSLDG00000007926	ythdc1	59	66.067	Seriola_lalandi_dorsalis
ENSSTOG00000013652	YTHDC1	79	96.928	ENSSARG00000010960	YTHDC1	100	96.928	Sorex_araneus
ENSSTOG00000013652	YTHDC1	93	81.924	ENSSPUG00000009357	YTHDC1	62	94.172	Sphenodon_punctatus
ENSSTOG00000013652	YTHDC1	57	61.261	ENSSPAG00000011449	ythdc1	59	66.432	Stegastes_partitus
ENSSTOG00000013652	YTHDC1	100	96.896	ENSSSCG00000035505	YTHDC1	100	96.896	Sus_scrofa
ENSSTOG00000013652	YTHDC1	93	85.212	ENSTGUG00000004452	-	59	95.082	Taeniopygia_guttata
ENSSTOG00000013652	YTHDC1	93	46.314	ENSTRUG00000010142	ythdc1	69	70.000	Takifugu_rubripes
ENSSTOG00000013652	YTHDC1	86	59.275	ENSTNIG00000013243	ythdc1	85	64.840	Tetraodon_nigroviridis
ENSSTOG00000013652	YTHDC1	93	86.070	ENSTBEG00000011546	YTHDC1	59	94.379	Tupaia_belangeri
ENSSTOG00000013652	YTHDC1	100	95.535	ENSTTRG00000005083	YTHDC1	100	95.535	Tursiops_truncatus
ENSSTOG00000013652	YTHDC1	93	96.361	ENSUAMG00000010388	YTHDC1	100	96.361	Ursus_americanus
ENSSTOG00000013652	YTHDC1	99	82.806	ENSUMAG00000013668	YTHDC1	98	82.806	Ursus_maritimus
ENSSTOG00000013652	YTHDC1	100	96.657	ENSVPAG00000009040	YTHDC1	100	96.657	Vicugna_pacos
ENSSTOG00000013652	YTHDC1	99	97.534	ENSVVUG00000005387	YTHDC1	100	96.221	Vulpes_vulpes
ENSSTOG00000013652	YTHDC1	92	72.981	ENSXETG00000017960	ythdc1	91	70.713	Xenopus_tropicalis
ENSSTOG00000013652	YTHDC1	57	58.482	ENSXMAG00000005196	ythdc1	61	63.964	Xiphophorus_maculatus