EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSTOG00000013853 (Gene tree)
Gene ID: -
Gene Symbol: GTF3A
Alias: AP2|TFIIIA
Full Name: general transcription factor IIIA
Gene Type: protein_coding
Species: Ictidomys_tridecemlineatus
Status: putative
Strand: Plus strand
Length: 12062 bases
Position: chrJH393282.1:22671220-22683281
Accession: 101962051
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSTOP00000012416	zf-C2H2	PF00096.26	1.2e-35	1	6
ENSSTOP00000012416	zf-C2H2	PF00096.26	1.2e-35	2	6
ENSSTOP00000012416	zf-C2H2	PF00096.26	1.2e-35	3	6
ENSSTOP00000012416	zf-C2H2	PF00096.26	1.2e-35	4	6
ENSSTOP00000012416	zf-C2H2	PF00096.26	1.2e-35	5	6
ENSSTOP00000012416	zf-C2H2	PF00096.26	1.2e-35	6	6
ENSSTOP00000012416	zf-met	PF12874.7	1.2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSTOT00000013858	GTF3A-201	1107	XM_013360354	ENSSTOP00000012416	313 (aa)	XP_013215808	I3MLT8

Gene Model

Click here to download ENSSTOG00000013853's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSTOG00000013853's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSTOG00000013853	GTF3A	65	43.373	ENSSTOG00000000887	ZNF784	52	43.373
ENSSTOG00000013853	GTF3A	89	30.769	ENSSTOG00000019944	ZNF319	81	30.065
ENSSTOG00000013853	GTF3A	97	32.489	ENSSTOG00000024118	-	78	32.489
ENSSTOG00000013853	GTF3A	83	38.028	ENSSTOG00000013458	ZNF112	62	38.028
ENSSTOG00000013853	GTF3A	86	33.846	ENSSTOG00000034297	-	66	33.846
ENSSTOG00000013853	GTF3A	85	36.604	ENSSTOG00000033893	-	77	36.604
ENSSTOG00000013853	GTF3A	98	39.535	ENSSTOG00000004741	PRDM5	78	36.697
ENSSTOG00000013853	GTF3A	94	38.095	ENSSTOG00000025586	ZNF865	68	30.736
ENSSTOG00000013853	GTF3A	82	32.456	ENSSTOG00000027842	MAZ	73	32.743
ENSSTOG00000013853	GTF3A	86	41.860	ENSSTOG00000006987	ZNF236	56	41.860
ENSSTOG00000013853	GTF3A	85	33.708	ENSSTOG00000022105	-	91	33.708
ENSSTOG00000013853	GTF3A	94	30.435	ENSSTOG00000019989	ZFP64	71	30.380
ENSSTOG00000013853	GTF3A	93	35.885	ENSSTOG00000026126	ZNF628	55	35.885
ENSSTOG00000013853	GTF3A	96	37.073	ENSSTOG00000026739	ZNF2	59	37.073
ENSSTOG00000013853	GTF3A	83	36.986	ENSSTOG00000023536	-	73	36.986
ENSSTOG00000013853	GTF3A	86	36.330	ENSSTOG00000034090	ZNF226	61	35.741
ENSSTOG00000013853	GTF3A	96	31.667	ENSSTOG00000000130	ZNF691	70	32.075
ENSSTOG00000013853	GTF3A	75	33.621	ENSSTOG00000005866	SNAI1	50	33.621
ENSSTOG00000013853	GTF3A	70	34.831	ENSSTOG00000032944	SCRT2	74	34.167
ENSSTOG00000013853	GTF3A	83	35.345	ENSSTOG00000022317	ZFP1	68	35.345
ENSSTOG00000013853	GTF3A	83	35.472	ENSSTOG00000030417	-	76	35.606

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSTOG00000013853	GTF3A	97	85.526	ENSAMEG00000015824	GTF3A	85	84.936	Ailuropoda_melanoleuca
ENSSTOG00000013853	GTF3A	100	83.067	ENSBTAG00000012600	GTF3A	87	82.428	Bos_taurus
ENSSTOG00000013853	GTF3A	100	85.032	ENSCAFG00000006794	GTF3A	86	84.076	Canis_familiaris
ENSSTOG00000013853	GTF3A	100	83.387	ENSCHIG00000010341	-	87	82.109	Capra_hircus
ENSSTOG00000013853	GTF3A	100	83.387	ENSCHIG00000021040	-	74	82.109	Capra_hircus
ENSSTOG00000013853	GTF3A	88	84.783	ENSTSYG00000004206	GTF3A	82	85.818	Carlito_syrichta
ENSSTOG00000013853	GTF3A	90	89.627	ENSCAPG00000015862	GTF3A	98	89.627	Cavia_aperea
ENSSTOG00000013853	GTF3A	100	87.540	ENSCPOG00000010143	GTF3A	98	87.540	Cavia_porcellus
ENSSTOG00000013853	GTF3A	100	88.179	ENSCLAG00000003912	GTF3A	95	88.179	Chinchilla_lanigera
ENSSTOG00000013853	GTF3A	97	83.660	ENSDNOG00000037405	-	74	83.067	Dasypus_novemcinctus
ENSSTOG00000013853	GTF3A	99	82.682	ENSETEG00000003225	GTF3A	63	82.682	Echinops_telfairi
ENSSTOG00000013853	GTF3A	97	85.197	ENSEASG00005022495	-	69	85.256	Equus_asinus_asinus
ENSSTOG00000013853	GTF3A	98	73.377	ENSEASG00005013216	-	81	73.377	Equus_asinus_asinus
ENSSTOG00000013853	GTF3A	88	82.671	ENSECAG00000024825	-	63	82.545	Equus_caballus
ENSSTOG00000013853	GTF3A	97	86.184	ENSECAG00000014803	GTF3A	71	87.347	Equus_caballus
ENSSTOG00000013853	GTF3A	97	81.518	ENSEEUG00000004307	GTF3A	82	81.759	Erinaceus_europaeus
ENSSTOG00000013853	GTF3A	99	84.615	ENSFCAG00000006982	GTF3A	72	84.295	Felis_catus
ENSSTOG00000013853	GTF3A	99	90.032	ENSFDAG00000016841	GTF3A	96	90.032	Fukomys_damarensis
ENSSTOG00000013853	GTF3A	99	90.385	ENSHGLG00000004173	GTF3A	97	90.385	Heterocephalus_glaber_female
ENSSTOG00000013853	GTF3A	99	90.385	ENSHGLG00100011561	GTF3A	97	90.385	Heterocephalus_glaber_male
ENSSTOG00000013853	GTF3A	87	82.812	ENSJJAG00000011501	Gtf3a	88	83.966	Jaculus_jaculus
ENSSTOG00000013853	GTF3A	99	77.918	ENSLAFG00000027315	GTF3A	86	77.918	Loxodonta_africana
ENSSTOG00000013853	GTF3A	99	82.372	ENSMAUG00000016253	Gtf3a	84	81.410	Mesocricetus_auratus
ENSSTOG00000013853	GTF3A	97	85.526	ENSMICG00000014763	GTF3A	84	85.897	Microcebus_murinus
ENSSTOG00000013853	GTF3A	100	83.706	MGP_CAROLIEiJ_G0028031	Gtf3a	91	82.748	Mus_caroli
ENSSTOG00000013853	GTF3A	100	83.387	ENSMUSG00000016503	Gtf3a	91	82.428	Mus_musculus
ENSSTOG00000013853	GTF3A	100	83.706	MGP_PahariEiJ_G0024597	Gtf3a	91	82.748	Mus_pahari
ENSSTOG00000013853	GTF3A	100	83.387	MGP_SPRETEiJ_G0029029	Gtf3a	91	82.428	Mus_spretus
ENSSTOG00000013853	GTF3A	97	87.171	ENSMPUG00000005835	GTF3A	84	86.859	Mustela_putorius_furo
ENSSTOG00000013853	GTF3A	96	87.375	ENSMLUG00000002158	GTF3A	93	87.055	Myotis_lucifugus
ENSSTOG00000013853	GTF3A	97	87.171	ENSNLEG00000000331	GTF3A	85	87.500	Nomascus_leucogenys
ENSSTOG00000013853	GTF3A	93	59.310	ENSMEUG00000010089	GTF3A	81	60.727	Notamacropus_eugenii
ENSSTOG00000013853	GTF3A	99	75.563	ENSOPRG00000000854	-	79	75.241	Ochotona_princeps
ENSSTOG00000013853	GTF3A	99	87.821	ENSODEG00000006725	GTF3A	74	87.821	Octodon_degus
ENSSTOG00000013853	GTF3A	100	83.067	ENSOCUG00000011713	GTF3A	71	83.067	Oryctolagus_cuniculus
ENSSTOG00000013853	GTF3A	97	84.868	ENSOGAG00000014589	GTF3A	85	84.936	Otolemur_garnettii
ENSSTOG00000013853	GTF3A	100	77.636	ENSOARG00000012551	GTF3A	86	76.358	Ovis_aries
ENSSTOG00000013853	GTF3A	99	86.218	ENSPPRG00000002368	GTF3A	85	85.256	Panthera_pardus
ENSSTOG00000013853	GTF3A	88	86.531	ENSPTIG00000018958	GTF3A	67	86.531	Panthera_tigris_altaica
ENSSTOG00000013853	GTF3A	88	52.857	ENSPSIG00000011722	GTF3A	75	52.857	Pelodiscus_sinensis
ENSSTOG00000013853	GTF3A	96	86.622	ENSPPYG00000005235	GTF3A	85	86.971	Pongo_abelii
ENSSTOG00000013853	GTF3A	97	84.918	ENSPCOG00000016742	GTF3A	70	84.936	Propithecus_coquereli
ENSSTOG00000013853	GTF3A	99	84.615	ENSPVAG00000012837	GTF3A	74	84.295	Pteropus_vampyrus
ENSSTOG00000013853	GTF3A	97	78.289	ENSRROG00000043264	GTF3A	84	78.846	Rhinopithecus_roxellana
ENSSTOG00000013853	GTF3A	88	81.949	ENSSHAG00000016965	GTF3A	79	82.545	Sarcophilus_harrisii
ENSSTOG00000013853	GTF3A	99	75.563	ENSSARG00000010692	GTF3A	86	75.563	Sorex_araneus
ENSSTOG00000013853	GTF3A	91	70.877	ENSSPUG00000005307	GTF3A	74	72.464	Sphenodon_punctatus
ENSSTOG00000013853	GTF3A	95	43.667	ENSTRUG00000005241	gtf3ab	80	48.175	Takifugu_rubripes
ENSSTOG00000013853	GTF3A	88	86.939	ENSTBEG00000012075	GTF3A	58	86.939	Tupaia_belangeri
ENSSTOG00000013853	GTF3A	99	77.389	ENSTTRG00000008538	GTF3A	75	76.923	Tursiops_truncatus
ENSSTOG00000013853	GTF3A	97	86.513	ENSUAMG00000019189	GTF3A	85	85.897	Ursus_americanus
ENSSTOG00000013853	GTF3A	96	85.149	ENSUMAG00000016941	GTF3A	100	84.158	Ursus_maritimus
ENSSTOG00000013853	GTF3A	85	86.920	ENSVPAG00000004995	GTF3A	82	87.347	Vicugna_pacos
ENSSTOG00000013853	GTF3A	99	85.161	ENSVVUG00000009197	GTF3A	85	84.194	Vulpes_vulpes