EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSTOG00000013877 (Gene tree)
Gene ID: 101959095
Gene Symbol: POLR1D
Alias: MGC9850|RPA16|RPA9|RPAC2|RPO1-3
Full Name: RNA polymerase I and III subunit D
Gene Type: protein_coding
Species: Ictidomys_tridecemlineatus
Status: putative
Strand: Plus strand
Length: 40620 bases
Position: chrJH393282.1:22841094-22881713
Accession: 101959095
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSTOP00000012430	RNA_pol_L_2	PF13656.6	3.9e-28	1	1
ENSSTOP00000012430	RNA_pol_L	PF01193.24	6.4e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSTOT00000024037	POLR1D-202	941	-	ENSSTOP00000020073	122 (aa)	-	I3N6S7
ENSSTOT00000013875	POLR1D-201	795	XM_005317055	ENSSTOP00000012430	133 (aa)	XP_005317112	I3MLU9

Gene Model

Click here to download ENSSTOG00000013877's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSTOG00000013877's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSTOG00000013877	POLR1D	77	33.010	ENSSTOG00000006377	POLR2J	85	33.010

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSTOG00000013877	POLR1D	100	99.248	ENSG00000186184	POLR1D	100	99.248	Homo_sapiens
ENSSTOG00000013877	POLR1D	83	67.568	ENSAPOG00000021882	polr1d	98	67.568	Acanthochromis_polyacanthus
ENSSTOG00000013877	POLR1D	94	99.200	ENSAMEG00000019095	POLR1D	100	99.200	Ailuropoda_melanoleuca
ENSSTOG00000013877	POLR1D	75	75.000	ENSACIG00000013328	polr1d	87	75.000	Amphilophus_citrinellus
ENSSTOG00000013877	POLR1D	84	66.964	ENSAOCG00000018500	polr1d	98	66.964	Amphiprion_ocellaris
ENSSTOG00000013877	POLR1D	84	66.071	ENSAPEG00000009489	polr1d	98	66.071	Amphiprion_percula
ENSSTOG00000013877	POLR1D	80	67.290	ENSATEG00000019322	polr1d	94	67.290	Anabas_testudineus
ENSSTOG00000013877	POLR1D	83	65.766	ENSACAG00000015753	POLR1D	96	65.766	Anolis_carolinensis
ENSSTOG00000013877	POLR1D	100	99.248	ENSANAG00000024486	POLR1D	100	99.248	Aotus_nancymaae
ENSSTOG00000013877	POLR1D	77	74.510	ENSACLG00000023805	polr1d	94	71.028	Astatotilapia_calliptera
ENSSTOG00000013877	POLR1D	80	68.868	ENSAMXG00000036118	polr1d	92	68.868	Astyanax_mexicanus
ENSSTOG00000013877	POLR1D	100	95.489	ENSBTAG00000008642	POLR1D	100	95.489	Bos_taurus
ENSSTOG00000013877	POLR1D	100	95.489	ENSBTAG00000033252	-	100	95.489	Bos_taurus
ENSSTOG00000013877	POLR1D	62	37.805	WBGene00010230	rpac-19	57	37.805	Caenorhabditis_elegans
ENSSTOG00000013877	POLR1D	100	98.496	ENSCJAG00000044669	POLR1D	100	98.496	Callithrix_jacchus
ENSSTOG00000013877	POLR1D	100	99.248	ENSCAFG00000006755	POLR1D	100	99.248	Canis_familiaris
ENSSTOG00000013877	POLR1D	100	96.241	ENSCHIG00000021910	POLR1D	100	96.241	Capra_hircus
ENSSTOG00000013877	POLR1D	96	83.846	ENSTSYG00000034852	-	98	84.034	Carlito_syrichta
ENSSTOG00000013877	POLR1D	93	95.161	ENSTSYG00000026817	-	93	95.161	Carlito_syrichta
ENSSTOG00000013877	POLR1D	96	55.469	ENSCAPG00000006058	-	99	55.469	Cavia_aperea
ENSSTOG00000013877	POLR1D	96	56.250	ENSCPOG00000030450	-	99	56.250	Cavia_porcellus
ENSSTOG00000013877	POLR1D	100	79.699	ENSCCAG00000020191	-	100	79.699	Cebus_capucinus
ENSSTOG00000013877	POLR1D	100	97.744	ENSCCAG00000021349	-	100	97.744	Cebus_capucinus
ENSSTOG00000013877	POLR1D	100	87.218	ENSCATG00000022900	-	100	87.218	Cercocebus_atys
ENSSTOG00000013877	POLR1D	100	97.744	ENSCATG00000030710	-	100	97.744	Cercocebus_atys
ENSSTOG00000013877	POLR1D	93	97.581	ENSCLAG00000017623	POLR1D	100	97.581	Chinchilla_lanigera
ENSSTOG00000013877	POLR1D	73	78.351	ENSCPBG00000004719	POLR1D	96	78.351	Chrysemys_picta_bellii
ENSSTOG00000013877	POLR1D	100	97.744	ENSCANG00000028632	-	100	97.744	Colobus_angolensis_palliatus
ENSSTOG00000013877	POLR1D	100	94.737	ENSCANG00000037694	-	100	94.737	Colobus_angolensis_palliatus
ENSSTOG00000013877	POLR1D	100	96.241	ENSCGRG00001021251	Polr1d	100	96.241	Cricetulus_griseus_chok1gshd
ENSSTOG00000013877	POLR1D	100	96.241	ENSCGRG00000011639	Polr1d	100	96.241	Cricetulus_griseus_crigri
ENSSTOG00000013877	POLR1D	78	70.192	ENSCSEG00000018268	polr1d	91	69.159	Cynoglossus_semilaevis
ENSSTOG00000013877	POLR1D	79	71.429	ENSCVAG00000018527	polr1d	92	71.429	Cyprinodon_variegatus
ENSSTOG00000013877	POLR1D	83	66.364	ENSDARG00000037570	polr1d	98	66.364	Danio_rerio
ENSSTOG00000013877	POLR1D	100	96.241	ENSDNOG00000043676	-	100	96.241	Dasypus_novemcinctus
ENSSTOG00000013877	POLR1D	100	94.030	ENSDNOG00000046247	-	100	94.030	Dasypus_novemcinctus
ENSSTOG00000013877	POLR1D	100	96.241	ENSDORG00000029155	Polr1d	100	96.241	Dipodomys_ordii
ENSSTOG00000013877	POLR1D	65	43.023	FBgn0086447	l(2)37Cg	81	43.023	Drosophila_melanogaster
ENSSTOG00000013877	POLR1D	93	90.323	ENSETEG00000012797	POLR1D	100	90.323	Echinops_telfairi
ENSSTOG00000013877	POLR1D	65	71.264	ENSEBUG00000011748	polr1d	61	71.264	Eptatretus_burgeri
ENSSTOG00000013877	POLR1D	96	96.875	ENSEASG00005022487	POLR1D	99	96.875	Equus_asinus_asinus
ENSSTOG00000013877	POLR1D	93	97.581	ENSEEUG00000013144	POLR1D	100	97.581	Erinaceus_europaeus
ENSSTOG00000013877	POLR1D	80	68.868	ENSELUG00000005105	rpac2	93	68.868	Esox_lucius
ENSSTOG00000013877	POLR1D	100	97.744	ENSFCAG00000030162	POLR1D	100	97.744	Felis_catus
ENSSTOG00000013877	POLR1D	72	77.083	ENSFALG00000011463	POLR1D	95	77.083	Ficedula_albicollis
ENSSTOG00000013877	POLR1D	100	96.241	ENSFDAG00000004463	POLR1D	100	96.241	Fukomys_damarensis
ENSSTOG00000013877	POLR1D	82	72.727	ENSFHEG00000015410	polr1d	96	72.727	Fundulus_heteroclitus
ENSSTOG00000013877	POLR1D	79	72.381	ENSGAFG00000001693	polr1d	92	72.381	Gambusia_affinis
ENSSTOG00000013877	POLR1D	88	68.644	ENSGACG00000018585	polr1d	100	68.644	Gasterosteus_aculeatus
ENSSTOG00000013877	POLR1D	81	76.852	ENSGAGG00000008503	POLR1D	95	76.852	Gopherus_agassizii
ENSSTOG00000013877	POLR1D	100	99.248	ENSGGOG00000004235	POLR1D	100	99.248	Gorilla_gorilla
ENSSTOG00000013877	POLR1D	80	71.028	ENSHBUG00000002111	polr1d	94	71.028	Haplochromis_burtoni
ENSSTOG00000013877	POLR1D	100	96.241	ENSHGLG00000003202	POLR1D	100	96.241	Heterocephalus_glaber_female
ENSSTOG00000013877	POLR1D	100	96.241	ENSHGLG00100009393	POLR1D	100	96.241	Heterocephalus_glaber_male
ENSSTOG00000013877	POLR1D	80	69.159	ENSHCOG00000003258	polr1d	94	69.159	Hippocampus_comes
ENSSTOG00000013877	POLR1D	79	73.333	ENSIPUG00000014810	polr1d	91	73.333	Ictalurus_punctatus
ENSSTOG00000013877	POLR1D	97	90.977	ENSJJAG00000022671	-	100	94.167	Jaculus_jaculus
ENSSTOG00000013877	POLR1D	95	76.190	ENSJJAG00000021667	-	75	76.190	Jaculus_jaculus
ENSSTOG00000013877	POLR1D	80	66.981	ENSKMAG00000015256	polr1d	93	66.981	Kryptolebias_marmoratus
ENSSTOG00000013877	POLR1D	79	72.381	ENSLBEG00000015919	polr1d	92	72.381	Labrus_bergylta
ENSSTOG00000013877	POLR1D	86	66.087	ENSLACG00000006810	POLR1D	95	66.087	Latimeria_chalumnae
ENSSTOG00000013877	POLR1D	54	77.027	ENSLOCG00000014976	polr1d	100	77.027	Lepisosteus_oculatus
ENSSTOG00000013877	POLR1D	100	89.474	ENSLAFG00000032290	POLR1D	100	89.474	Loxodonta_africana
ENSSTOG00000013877	POLR1D	94	97.600	ENSMFAG00000045264	POLR1D	97	97.600	Macaca_fascicularis
ENSSTOG00000013877	POLR1D	100	78.947	ENSMMUG00000041570	-	100	78.947	Macaca_mulatta
ENSSTOG00000013877	POLR1D	87	98.276	ENSMMUG00000020386	POLR1D	100	98.276	Macaca_mulatta
ENSSTOG00000013877	POLR1D	100	98.496	ENSMNEG00000008630	-	100	98.496	Macaca_nemestrina
ENSSTOG00000013877	POLR1D	100	81.955	ENSMNEG00000038120	-	100	81.955	Macaca_nemestrina
ENSSTOG00000013877	POLR1D	100	87.970	ENSMLEG00000032251	-	100	87.970	Mandrillus_leucophaeus
ENSSTOG00000013877	POLR1D	100	98.496	ENSMLEG00000041048	-	100	98.496	Mandrillus_leucophaeus
ENSSTOG00000013877	POLR1D	76	71.287	ENSMAMG00000014834	polr1d	94	71.287	Mastacembelus_armatus
ENSSTOG00000013877	POLR1D	77	74.510	ENSMZEG00005006638	polr1d	90	74.510	Maylandia_zebra
ENSSTOG00000013877	POLR1D	69	78.261	ENSMGAG00000005322	POLR1D	84	78.261	Meleagris_gallopavo
ENSSTOG00000013877	POLR1D	100	96.241	ENSMAUG00000001946	Polr1d	100	96.241	Mesocricetus_auratus
ENSSTOG00000013877	POLR1D	99	81.061	ENSMICG00000007349	-	100	81.061	Microcebus_murinus
ENSSTOG00000013877	POLR1D	100	97.744	ENSMICG00000016883	-	100	97.744	Microcebus_murinus
ENSSTOG00000013877	POLR1D	99	95.455	ENSMOCG00000021288	Polr1d	99	95.455	Microtus_ochrogaster
ENSSTOG00000013877	POLR1D	80	68.224	ENSMMOG00000009605	polr1d	94	68.224	Mola_mola
ENSSTOG00000013877	POLR1D	80	84.906	ENSMODG00000023881	POLR1D	93	84.906	Monodelphis_domestica
ENSSTOG00000013877	POLR1D	80	67.290	ENSMALG00000010652	polr1d	94	67.290	Monopterus_albus
ENSSTOG00000013877	POLR1D	100	90.977	MGP_CAROLIEiJ_G0028034	Polr1d	100	90.977	Mus_caroli
ENSSTOG00000013877	POLR1D	100	90.977	ENSMUSG00000029642	Polr1d	100	90.977	Mus_musculus
ENSSTOG00000013877	POLR1D	100	90.226	MGP_PahariEiJ_G0024600	Polr1d	100	90.226	Mus_pahari
ENSSTOG00000013877	POLR1D	100	91.729	MGP_SPRETEiJ_G0029032	Polr1d	100	91.729	Mus_spretus
ENSSTOG00000013877	POLR1D	99	87.121	ENSMLUG00000004118	-	99	87.121	Myotis_lucifugus
ENSSTOG00000013877	POLR1D	100	96.992	ENSMLUG00000027169	-	100	96.992	Myotis_lucifugus
ENSSTOG00000013877	POLR1D	87	97.414	ENSNGAG00000006014	Polr1d	100	97.414	Nannospalax_galili
ENSSTOG00000013877	POLR1D	80	71.028	ENSNBRG00000020327	polr1d	94	71.028	Neolamprologus_brichardi
ENSSTOG00000013877	POLR1D	100	99.248	ENSNLEG00000000358	POLR1D	100	99.248	Nomascus_leucogenys
ENSSTOG00000013877	POLR1D	100	81.955	ENSODEG00000014801	-	100	81.955	Octodon_degus
ENSSTOG00000013877	POLR1D	100	96.241	ENSODEG00000005294	-	100	96.241	Octodon_degus
ENSSTOG00000013877	POLR1D	79	81.905	ENSOANG00000008708	-	97	81.905	Ornithorhynchus_anatinus
ENSSTOG00000013877	POLR1D	100	96.992	ENSOCUG00000015706	POLR1D	82	96.992	Oryctolagus_cuniculus
ENSSTOG00000013877	POLR1D	80	68.224	ENSORLG00000010257	polr1d	94	68.224	Oryzias_latipes
ENSSTOG00000013877	POLR1D	83	66.667	ENSORLG00020000533	polr1d	75	66.667	Oryzias_latipes_hni
ENSSTOG00000013877	POLR1D	85	67.257	ENSORLG00015013267	polr1d	75	67.257	Oryzias_latipes_hsok
ENSSTOG00000013877	POLR1D	86	66.957	ENSOMEG00000014912	polr1d	77	66.957	Oryzias_melastigma
ENSSTOG00000013877	POLR1D	100	97.744	ENSOGAG00000014601	POLR1D	100	97.744	Otolemur_garnettii
ENSSTOG00000013877	POLR1D	94	96.000	ENSOARG00000017005	POLR1D	96	96.000	Ovis_aries
ENSSTOG00000013877	POLR1D	100	97.744	ENSPPAG00000028138	POLR1D	100	97.744	Pan_paniscus
ENSSTOG00000013877	POLR1D	99	97.727	ENSPPRG00000003381	POLR1D	99	97.727	Panthera_pardus
ENSSTOG00000013877	POLR1D	93	97.581	ENSPTIG00000018137	POLR1D	93	97.581	Panthera_tigris_altaica
ENSSTOG00000013877	POLR1D	100	99.248	ENSPTRG00000005734	POLR1D	100	99.248	Pan_troglodytes
ENSSTOG00000013877	POLR1D	100	98.496	ENSPANG00000020259	-	100	98.496	Papio_anubis
ENSSTOG00000013877	POLR1D	100	87.218	ENSPANG00000035051	-	100	87.218	Papio_anubis
ENSSTOG00000013877	POLR1D	86	62.609	ENSPKIG00000021891	polr1d	90	53.097	Paramormyrops_kingsleyae
ENSSTOG00000013877	POLR1D	87	72.650	ENSPSIG00000011822	POLR1D	91	72.650	Pelodiscus_sinensis
ENSSTOG00000013877	POLR1D	84	66.071	ENSPMGG00000010359	polr1d	97	66.071	Periophthalmus_magnuspinnatus
ENSSTOG00000013877	POLR1D	93	56.800	ENSPMGG00000012998	POLR1D	93	56.800	Periophthalmus_magnuspinnatus
ENSSTOG00000013877	POLR1D	100	92.481	ENSPEMG00000006336	-	100	92.481	Peromyscus_maniculatus_bairdii
ENSSTOG00000013877	POLR1D	82	59.633	ENSPMAG00000004228	polr1d	92	59.633	Petromyzon_marinus
ENSSTOG00000013877	POLR1D	80	84.906	ENSPCIG00000001673	POLR1D	93	84.906	Phascolarctos_cinereus
ENSSTOG00000013877	POLR1D	79	72.381	ENSPFOG00000023343	polr1d	92	73.750	Poecilia_formosa
ENSSTOG00000013877	POLR1D	79	72.381	ENSPLAG00000009675	polr1d	92	72.381	Poecilia_latipinna
ENSSTOG00000013877	POLR1D	79	72.381	ENSPMEG00000004628	polr1d	92	72.381	Poecilia_mexicana
ENSSTOG00000013877	POLR1D	79	72.381	ENSPREG00000022032	polr1d	92	72.381	Poecilia_reticulata
ENSSTOG00000013877	POLR1D	100	97.744	ENSPCOG00000028175	POLR1D	100	97.744	Propithecus_coquereli
ENSSTOG00000013877	POLR1D	80	71.028	ENSPNYG00000000107	polr1d	94	71.028	Pundamilia_nyererei
ENSSTOG00000013877	POLR1D	76	68.317	ENSPNAG00000001512	polr1d	87	67.308	Pygocentrus_nattereri
ENSSTOG00000013877	POLR1D	100	98.496	ENSRBIG00000036378	-	100	98.496	Rhinopithecus_bieti
ENSSTOG00000013877	POLR1D	100	94.737	ENSRBIG00000000336	-	100	94.737	Rhinopithecus_bieti
ENSSTOG00000013877	POLR1D	100	98.496	ENSRROG00000042232	-	100	98.496	Rhinopithecus_roxellana
ENSSTOG00000013877	POLR1D	100	94.737	ENSRROG00000026751	-	100	94.737	Rhinopithecus_roxellana
ENSSTOG00000013877	POLR1D	89	45.378	YNL113W	RPC19	84	45.378	Saccharomyces_cerevisiae
ENSSTOG00000013877	POLR1D	100	99.248	ENSSBOG00000028482	-	100	99.248	Saimiri_boliviensis_boliviensis
ENSSTOG00000013877	POLR1D	86	92.982	ENSSBOG00000030146	-	84	92.982	Saimiri_boliviensis_boliviensis
ENSSTOG00000013877	POLR1D	86	78.070	ENSSHAG00000001190	POLR1D	88	78.070	Sarcophilus_harrisii
ENSSTOG00000013877	POLR1D	82	73.394	ENSSFOG00015011375	polr1d	96	73.394	Scleropages_formosus
ENSSTOG00000013877	POLR1D	80	68.224	ENSSMAG00000011861	polr1d	94	68.224	Scophthalmus_maximus
ENSSTOG00000013877	POLR1D	80	67.290	ENSSDUG00000011930	polr1d	94	67.290	Seriola_dumerili
ENSSTOG00000013877	POLR1D	86	63.478	ENSSLDG00000023871	polr1d	97	63.478	Seriola_lalandi_dorsalis
ENSSTOG00000013877	POLR1D	100	97.744	ENSSARG00000007840	POLR1D	100	97.744	Sorex_araneus
ENSSTOG00000013877	POLR1D	79	75.238	ENSSPUG00000005786	POLR1D	95	72.072	Sphenodon_punctatus
ENSSTOG00000013877	POLR1D	79	72.381	ENSSPAG00000011764	polr1d	92	72.381	Stegastes_partitus
ENSSTOG00000013877	POLR1D	100	95.489	ENSSSCG00000009310	POLR1D	100	95.489	Sus_scrofa
ENSSTOG00000013877	POLR1D	72	77.083	ENSTGUG00000005450	POLR1D	100	77.083	Taeniopygia_guttata
ENSSTOG00000013877	POLR1D	78	65.385	ENSTRUG00000019741	polr1d	91	65.385	Takifugu_rubripes
ENSSTOG00000013877	POLR1D	93	96.774	ENSTBEG00000007006	POLR1D	100	96.774	Tupaia_belangeri
ENSSTOG00000013877	POLR1D	100	99.248	ENSUAMG00000011413	POLR1D	100	99.248	Ursus_americanus
ENSSTOG00000013877	POLR1D	93	99.194	ENSUMAG00000016968	POLR1D	97	99.194	Ursus_maritimus
ENSSTOG00000013877	POLR1D	100	99.248	ENSVVUG00000009216	POLR1D	100	99.248	Vulpes_vulpes
ENSSTOG00000013877	POLR1D	74	75.510	ENSXCOG00000011731	polr1d	75	75.510	Xiphophorus_couchianus
ENSSTOG00000013877	POLR1D	74	75.510	ENSXMAG00000017538	polr1d	75	75.510	Xiphophorus_maculatus