EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSTOG00000013936 (Gene tree)
Gene ID: 101968855
Gene Symbol: EDC3
Alias: FLJ21128|LSM16|YJDC|YJEFN2|hYjeF_N2-15q23
Full Name: enhancer of mRNA decapping 3
Gene Type: protein_coding
Species: Ictidomys_tridecemlineatus
Status: putative
Strand: Minus strand
Length: 50135 bases
Position: chrJH393281.1:33617256-33667390
Accession: 101968855
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSTOP00000012486	FDF	PF09532.10	8.1e-19	1	1
ENSSTOP00000030809	FDF	PF09532.10	8.1e-19	1	1
ENSSTOP00000012486	LSM14	PF12701.7	5.8e-10	1	1
ENSSTOP00000030809	LSM14	PF12701.7	5.8e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSTOT00000013935	EDC3-202	1704	XM_005316798	ENSSTOP00000012486	508 (aa)	XP_005316855	I3MLZ0
ENSSTOT00000031654	EDC3-201	1907	XM_013358221	ENSSTOP00000030809	508 (aa)	XP_013213675	I3MLZ0

Gene Model

Click here to download ENSSTOG00000013936's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSTOG00000013936's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSTOG00000013936	EDC3	100	97.638	ENSG00000179151	EDC3	100	100.000	Homo_sapiens
ENSSTOG00000013936	EDC3	100	70.000	ENSAPOG00000010791	edc3	100	70.000	Acanthochromis_polyacanthus
ENSSTOG00000013936	EDC3	100	56.311	ENSAPOG00000008655	EDC3	100	56.311	Acanthochromis_polyacanthus
ENSSTOG00000013936	EDC3	100	96.654	ENSAMEG00000008963	EDC3	100	96.654	Ailuropoda_melanoleuca
ENSSTOG00000013936	EDC3	100	68.566	ENSACIG00000017751	edc3	100	68.566	Amphilophus_citrinellus
ENSSTOG00000013936	EDC3	99	59.844	ENSACIG00000005330	EDC3	99	59.844	Amphilophus_citrinellus
ENSSTOG00000013936	EDC3	100	58.140	ENSAOCG00000009103	-	100	58.140	Amphiprion_ocellaris
ENSSTOG00000013936	EDC3	100	70.000	ENSAOCG00000005431	edc3	100	70.000	Amphiprion_ocellaris
ENSSTOG00000013936	EDC3	100	70.000	ENSAPEG00000000968	edc3	100	70.000	Amphiprion_percula
ENSSTOG00000013936	EDC3	100	58.140	ENSAPEG00000007841	EDC3	100	58.140	Amphiprion_percula
ENSSTOG00000013936	EDC3	100	58.462	ENSATEG00000004205	-	100	58.462	Anabas_testudineus
ENSSTOG00000013936	EDC3	100	69.941	ENSATEG00000015505	edc3	100	69.941	Anabas_testudineus
ENSSTOG00000013936	EDC3	90	87.473	ENSAPLG00000008957	EDC3	100	87.473	Anas_platyrhynchos
ENSSTOG00000013936	EDC3	78	86.902	ENSACAG00000000460	-	100	86.902	Anolis_carolinensis
ENSSTOG00000013936	EDC3	100	97.835	ENSANAG00000024078	EDC3	100	97.835	Aotus_nancymaae
ENSSTOG00000013936	EDC3	100	68.566	ENSACLG00000007232	edc3	100	68.566	Astatotilapia_calliptera
ENSSTOG00000013936	EDC3	99	58.984	ENSACLG00000018776	-	99	58.984	Astatotilapia_calliptera
ENSSTOG00000013936	EDC3	100	70.793	ENSAMXG00000001589	edc3	100	70.793	Astyanax_mexicanus
ENSSTOG00000013936	EDC3	100	97.244	ENSBTAG00000007308	EDC3	100	97.244	Bos_taurus
ENSSTOG00000013936	EDC3	100	98.031	ENSCJAG00000017681	EDC3	100	98.031	Callithrix_jacchus
ENSSTOG00000013936	EDC3	100	97.047	ENSCAFG00000017935	EDC3	100	97.047	Canis_familiaris
ENSSTOG00000013936	EDC3	100	97.047	ENSCAFG00020003909	EDC3	100	97.047	Canis_lupus_dingo
ENSSTOG00000013936	EDC3	100	97.047	ENSCHIG00000023658	EDC3	100	97.047	Capra_hircus
ENSSTOG00000013936	EDC3	100	97.047	ENSTSYG00000004822	EDC3	100	97.047	Carlito_syrichta
ENSSTOG00000013936	EDC3	100	95.472	ENSCPOG00000015595	EDC3	100	95.472	Cavia_porcellus
ENSSTOG00000013936	EDC3	100	98.228	ENSCCAG00000021663	EDC3	100	98.228	Cebus_capucinus
ENSSTOG00000013936	EDC3	100	98.031	ENSCATG00000037511	EDC3	100	98.031	Cercocebus_atys
ENSSTOG00000013936	EDC3	100	95.276	ENSCLAG00000005700	EDC3	100	95.276	Chinchilla_lanigera
ENSSTOG00000013936	EDC3	100	98.031	ENSCSAG00000014239	EDC3	100	98.031	Chlorocebus_sabaeus
ENSSTOG00000013936	EDC3	100	89.567	ENSCPBG00000024239	EDC3	100	89.567	Chrysemys_picta_bellii
ENSSTOG00000013936	EDC3	100	38.196	ENSCING00000022142	-	99	38.196	Ciona_intestinalis
ENSSTOG00000013936	EDC3	100	98.031	ENSCANG00000028699	EDC3	100	98.031	Colobus_angolensis_palliatus
ENSSTOG00000013936	EDC3	100	96.654	ENSCGRG00001013874	Edc3	100	96.654	Cricetulus_griseus_chok1gshd
ENSSTOG00000013936	EDC3	100	96.654	ENSCGRG00000011885	Edc3	100	96.654	Cricetulus_griseus_crigri
ENSSTOG00000013936	EDC3	99	69.488	ENSCSEG00000012996	edc3	99	69.488	Cynoglossus_semilaevis
ENSSTOG00000013936	EDC3	100	69.608	ENSCVAG00000008023	edc3	100	69.608	Cyprinodon_variegatus
ENSSTOG00000013936	EDC3	99	69.006	ENSDARG00000051931	edc3	99	69.006	Danio_rerio
ENSSTOG00000013936	EDC3	100	85.465	ENSDNOG00000030661	EDC3	100	85.465	Dasypus_novemcinctus
ENSSTOG00000013936	EDC3	64	98.148	ENSETEG00000002398	-	64	98.148	Echinops_telfairi
ENSSTOG00000013936	EDC3	100	97.638	ENSEASG00005005071	EDC3	100	97.638	Equus_asinus_asinus
ENSSTOG00000013936	EDC3	100	97.638	ENSECAG00000017994	EDC3	100	97.638	Equus_caballus
ENSSTOG00000013936	EDC3	100	66.277	ENSELUG00000005794	edc3	100	66.277	Esox_lucius
ENSSTOG00000013936	EDC3	100	62.427	ENSELUG00000007607	EDC3	100	62.427	Esox_lucius
ENSSTOG00000013936	EDC3	100	96.654	ENSFCAG00000002014	EDC3	100	96.654	Felis_catus
ENSSTOG00000013936	EDC3	98	84.970	ENSFALG00000004543	EDC3	96	84.970	Ficedula_albicollis
ENSSTOG00000013936	EDC3	100	94.882	ENSFDAG00000012582	EDC3	100	94.882	Fukomys_damarensis
ENSSTOG00000013936	EDC3	100	69.608	ENSFHEG00000009375	edc3	100	69.608	Fundulus_heteroclitus
ENSSTOG00000013936	EDC3	100	68.555	ENSGMOG00000002715	edc3	100	68.750	Gadus_morhua
ENSSTOG00000013936	EDC3	100	88.976	ENSGALG00000040181	EDC3	100	88.976	Gallus_gallus
ENSSTOG00000013936	EDC3	100	68.173	ENSGAFG00000014433	edc3	100	68.173	Gambusia_affinis
ENSSTOG00000013936	EDC3	100	68.762	ENSGACG00000009783	edc3	100	68.762	Gasterosteus_aculeatus
ENSSTOG00000013936	EDC3	99	55.278	ENSGACG00000014671	EDC3	99	56.140	Gasterosteus_aculeatus
ENSSTOG00000013936	EDC3	100	89.173	ENSGAGG00000023477	EDC3	100	89.173	Gopherus_agassizii
ENSSTOG00000013936	EDC3	100	97.835	ENSGGOG00000003552	EDC3	100	97.835	Gorilla_gorilla
ENSSTOG00000013936	EDC3	99	58.984	ENSHBUG00000020817	EDC3	99	58.984	Haplochromis_burtoni
ENSSTOG00000013936	EDC3	100	68.566	ENSHBUG00000003635	edc3	100	68.566	Haplochromis_burtoni
ENSSTOG00000013936	EDC3	100	67.906	ENSHCOG00000016834	edc3	100	67.906	Hippocampus_comes
ENSSTOG00000013936	EDC3	99	70.254	ENSIPUG00000005695	edc3	100	70.254	Ictalurus_punctatus
ENSSTOG00000013936	EDC3	100	95.866	ENSJJAG00000008074	Edc3	100	95.866	Jaculus_jaculus
ENSSTOG00000013936	EDC3	100	69.155	ENSKMAG00000001243	edc3	100	69.155	Kryptolebias_marmoratus
ENSSTOG00000013936	EDC3	100	55.642	ENSKMAG00000001987	EDC3	100	55.642	Kryptolebias_marmoratus
ENSSTOG00000013936	EDC3	100	58.349	ENSLBEG00000017984	EDC3	100	58.349	Labrus_bergylta
ENSSTOG00000013936	EDC3	100	69.216	ENSLBEG00000013435	edc3	99	69.472	Labrus_bergylta
ENSSTOG00000013936	EDC3	100	77.476	ENSLACG00000014149	EDC3	100	77.476	Latimeria_chalumnae
ENSSTOG00000013936	EDC3	99	67.446	ENSLOCG00000014625	edc3	99	67.641	Lepisosteus_oculatus
ENSSTOG00000013936	EDC3	100	96.063	ENSLAFG00000002992	EDC3	100	96.063	Loxodonta_africana
ENSSTOG00000013936	EDC3	100	97.638	ENSMFAG00000043074	EDC3	100	97.638	Macaca_fascicularis
ENSSTOG00000013936	EDC3	100	97.638	ENSMMUG00000011071	EDC3	100	97.638	Macaca_mulatta
ENSSTOG00000013936	EDC3	100	97.638	ENSMNEG00000035316	EDC3	100	97.638	Macaca_nemestrina
ENSSTOG00000013936	EDC3	100	98.031	ENSMLEG00000030372	EDC3	100	98.031	Mandrillus_leucophaeus
ENSSTOG00000013936	EDC3	100	70.138	ENSMAMG00000000505	edc3	100	70.138	Mastacembelus_armatus
ENSSTOG00000013936	EDC3	99	56.836	ENSMAMG00000005423	-	99	56.836	Mastacembelus_armatus
ENSSTOG00000013936	EDC3	100	68.566	ENSMZEG00005004892	edc3	100	68.566	Maylandia_zebra
ENSSTOG00000013936	EDC3	99	59.180	ENSMZEG00005005654	EDC3	99	59.180	Maylandia_zebra
ENSSTOG00000013936	EDC3	100	87.992	ENSMGAG00000002617	EDC3	100	87.992	Meleagris_gallopavo
ENSSTOG00000013936	EDC3	100	97.441	ENSMICG00000043190	EDC3	100	97.441	Microcebus_murinus
ENSSTOG00000013936	EDC3	100	96.654	ENSMOCG00000016205	Edc3	100	96.654	Microtus_ochrogaster
ENSSTOG00000013936	EDC3	99	69.155	ENSMMOG00000012278	edc3	99	69.488	Mola_mola
ENSSTOG00000013936	EDC3	100	93.110	ENSMODG00000009442	EDC3	100	93.110	Monodelphis_domestica
ENSSTOG00000013936	EDC3	100	69.941	ENSMALG00000008658	edc3	100	69.941	Monopterus_albus
ENSSTOG00000013936	EDC3	100	96.260	MGP_CAROLIEiJ_G0032280	Edc3	100	98.462	Mus_caroli
ENSSTOG00000013936	EDC3	100	96.260	ENSMUSG00000038957	Edc3	100	98.462	Mus_musculus
ENSSTOG00000013936	EDC3	100	96.457	MGP_PahariEiJ_G0015146	Edc3	100	98.462	Mus_pahari
ENSSTOG00000013936	EDC3	100	96.063	MGP_SPRETEiJ_G0033420	Edc3	100	98.462	Mus_spretus
ENSSTOG00000013936	EDC3	100	96.457	ENSMPUG00000017293	EDC3	100	96.457	Mustela_putorius_furo
ENSSTOG00000013936	EDC3	100	96.667	ENSMLUG00000016382	EDC3	100	96.667	Myotis_lucifugus
ENSSTOG00000013936	EDC3	100	96.260	ENSNGAG00000010923	Edc3	100	96.260	Nannospalax_galili
ENSSTOG00000013936	EDC3	100	68.369	ENSNBRG00000002434	edc3	100	68.369	Neolamprologus_brichardi
ENSSTOG00000013936	EDC3	99	59.180	ENSNBRG00000007881	EDC3	99	59.180	Neolamprologus_brichardi
ENSSTOG00000013936	EDC3	100	88.189	ENSNLEG00000014577	EDC3	100	88.189	Nomascus_leucogenys
ENSSTOG00000013936	EDC3	100	91.929	ENSMEUG00000009077	EDC3	100	91.929	Notamacropus_eugenii
ENSSTOG00000013936	EDC3	79	96.296	ENSOPRG00000009540	-	79	96.296	Ochotona_princeps
ENSSTOG00000013936	EDC3	99	60.624	ENSONIG00000002932	-	99	60.624	Oreochromis_niloticus
ENSSTOG00000013936	EDC3	100	68.762	ENSONIG00000008434	edc3	100	68.762	Oreochromis_niloticus
ENSSTOG00000013936	EDC3	78	91.436	ENSOCUG00000017740	EDC3	86	91.436	Oryctolagus_cuniculus
ENSSTOG00000013936	EDC3	100	56.250	ENSORLG00000014399	-	98	56.250	Oryzias_latipes
ENSSTOG00000013936	EDC3	100	67.976	ENSORLG00000004883	edc3	100	67.976	Oryzias_latipes
ENSSTOG00000013936	EDC3	100	56.250	ENSORLG00020019446	-	100	56.250	Oryzias_latipes_hni
ENSSTOG00000013936	EDC3	100	67.583	ENSORLG00020012262	edc3	100	67.583	Oryzias_latipes_hni
ENSSTOG00000013936	EDC3	100	67.578	ENSORLG00015005634	edc3	100	67.578	Oryzias_latipes_hsok
ENSSTOG00000013936	EDC3	100	55.859	ENSORLG00015017635	-	96	55.859	Oryzias_latipes_hsok
ENSSTOG00000013936	EDC3	100	56.641	ENSOMEG00000017354	EDC3	100	56.641	Oryzias_melastigma
ENSSTOG00000013936	EDC3	100	68.555	ENSOMEG00000014026	edc3	100	68.555	Oryzias_melastigma
ENSSTOG00000013936	EDC3	100	97.835	ENSOGAG00000014441	EDC3	100	97.835	Otolemur_garnettii
ENSSTOG00000013936	EDC3	100	96.660	ENSOARG00000003476	EDC3	100	96.660	Ovis_aries
ENSSTOG00000013936	EDC3	100	97.835	ENSPPAG00000040143	EDC3	100	97.835	Pan_paniscus
ENSSTOG00000013936	EDC3	100	96.654	ENSPPRG00000006257	EDC3	100	96.654	Panthera_pardus
ENSSTOG00000013936	EDC3	100	96.654	ENSPTIG00000017424	EDC3	100	96.654	Panthera_tigris_altaica
ENSSTOG00000013936	EDC3	100	97.835	ENSPTRG00000007279	EDC3	100	97.835	Pan_troglodytes
ENSSTOG00000013936	EDC3	100	98.031	ENSPANG00000015997	EDC3	100	98.031	Papio_anubis
ENSSTOG00000013936	EDC3	100	66.602	ENSPKIG00000019810	EDC3	100	66.602	Paramormyrops_kingsleyae
ENSSTOG00000013936	EDC3	100	68.555	ENSPKIG00000004416	edc3	100	69.531	Paramormyrops_kingsleyae
ENSSTOG00000013936	EDC3	100	83.858	ENSPSIG00000008474	EDC3	100	83.858	Pelodiscus_sinensis
ENSSTOG00000013936	EDC3	100	66.928	ENSPMGG00000007223	edc3	100	66.928	Periophthalmus_magnuspinnatus
ENSSTOG00000013936	EDC3	100	96.260	ENSPEMG00000015260	Edc3	100	96.260	Peromyscus_maniculatus_bairdii
ENSSTOG00000013936	EDC3	100	90.748	ENSPCIG00000006276	EDC3	70	90.927	Phascolarctos_cinereus
ENSSTOG00000013936	EDC3	100	69.352	ENSPFOG00000012204	edc3	100	69.352	Poecilia_formosa
ENSSTOG00000013936	EDC3	100	69.352	ENSPLAG00000014420	edc3	100	69.352	Poecilia_latipinna
ENSSTOG00000013936	EDC3	100	69.352	ENSPMEG00000023289	edc3	100	69.352	Poecilia_mexicana
ENSSTOG00000013936	EDC3	100	69.352	ENSPREG00000016022	edc3	100	69.352	Poecilia_reticulata
ENSSTOG00000013936	EDC3	100	96.654	ENSPPYG00000006642	EDC3	100	96.654	Pongo_abelii
ENSSTOG00000013936	EDC3	88	100.000	ENSPCAG00000002802	EDC3	88	100.000	Procavia_capensis
ENSSTOG00000013936	EDC3	100	97.047	ENSPCOG00000013364	EDC3	100	97.047	Propithecus_coquereli
ENSSTOG00000013936	EDC3	100	96.063	ENSPVAG00000014733	EDC3	100	96.063	Pteropus_vampyrus
ENSSTOG00000013936	EDC3	100	68.566	ENSPNYG00000021797	edc3	100	68.566	Pundamilia_nyererei
ENSSTOG00000013936	EDC3	99	58.984	ENSPNYG00000009669	EDC3	99	58.984	Pundamilia_nyererei
ENSSTOG00000013936	EDC3	100	69.750	ENSPNAG00000019657	edc3	100	69.750	Pygocentrus_nattereri
ENSSTOG00000013936	EDC3	99	96.832	ENSRNOG00000019579	Edc3	99	96.832	Rattus_norvegicus
ENSSTOG00000013936	EDC3	100	97.638	ENSRBIG00000019488	EDC3	100	97.638	Rhinopithecus_bieti
ENSSTOG00000013936	EDC3	100	97.638	ENSRROG00000034959	EDC3	100	97.638	Rhinopithecus_roxellana
ENSSTOG00000013936	EDC3	100	98.031	ENSSBOG00000004896	EDC3	100	98.031	Saimiri_boliviensis_boliviensis
ENSSTOG00000013936	EDC3	96	91.820	ENSSHAG00000015075	EDC3	95	91.820	Sarcophilus_harrisii
ENSSTOG00000013936	EDC3	100	64.981	ENSSFOG00015002439	edc3	100	65.564	Scleropages_formosus
ENSSTOG00000013936	EDC3	100	70.623	ENSSFOG00015016939	edc3	100	71.206	Scleropages_formosus
ENSSTOG00000013936	EDC3	99	57.864	ENSSMAG00000010176	-	99	57.864	Scophthalmus_maximus
ENSSTOG00000013936	EDC3	100	69.155	ENSSMAG00000010695	edc3	100	69.155	Scophthalmus_maximus
ENSSTOG00000013936	EDC3	100	69.412	ENSSDUG00000021844	edc3	100	69.745	Seriola_dumerili
ENSSTOG00000013936	EDC3	100	59.656	ENSSDUG00000007671	EDC3	100	59.656	Seriola_dumerili
ENSSTOG00000013936	EDC3	100	69.412	ENSSLDG00000022046	edc3	100	69.745	Seriola_lalandi_dorsalis
ENSSTOG00000013936	EDC3	81	97.177	ENSSARG00000003907	EDC3	80	97.177	Sorex_araneus
ENSSTOG00000013936	EDC3	100	88.780	ENSSPUG00000008232	EDC3	100	88.780	Sphenodon_punctatus
ENSSTOG00000013936	EDC3	100	58.171	ENSSPAG00000020327	EDC3	100	58.171	Stegastes_partitus
ENSSTOG00000013936	EDC3	100	70.334	ENSSPAG00000010009	edc3	100	70.334	Stegastes_partitus
ENSSTOG00000013936	EDC3	100	97.835	ENSSSCG00000001903	EDC3	100	97.835	Sus_scrofa
ENSSTOG00000013936	EDC3	100	88.583	ENSTGUG00000004007	EDC3	100	88.583	Taeniopygia_guttata
ENSSTOG00000013936	EDC3	100	70.138	ENSTRUG00000017078	edc3	100	70.138	Takifugu_rubripes
ENSSTOG00000013936	EDC3	100	68.885	ENSTNIG00000016047	edc3	100	68.885	Tetraodon_nigroviridis
ENSSTOG00000013936	EDC3	100	96.850	ENSTTRG00000007990	EDC3	100	96.850	Tursiops_truncatus
ENSSTOG00000013936	EDC3	100	96.654	ENSUAMG00000026710	-	100	96.654	Ursus_americanus
ENSSTOG00000013936	EDC3	100	96.654	ENSUMAG00000005006	EDC3	96	96.654	Ursus_maritimus
ENSSTOG00000013936	EDC3	79	87.037	ENSVPAG00000003499	-	79	87.037	Vicugna_pacos
ENSSTOG00000013936	EDC3	100	97.047	ENSVVUG00000018601	EDC3	100	97.047	Vulpes_vulpes
ENSSTOG00000013936	EDC3	68	82.184	ENSXETG00000010622	edc3	99	83.333	Xenopus_tropicalis
ENSSTOG00000013936	EDC3	100	69.155	ENSXMAG00000007377	edc3	100	69.155	Xiphophorus_maculatus