EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSTOG00000013988 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ictidomys_tridecemlineatus
Status: putative
Strand: Plus strand
Length: 18562 bases
Position: chrJH393474.1:3035827-3054388
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSTOP00000012536	RRM_1	PF00076.22	1.1e-13	1	1
ENSSTOP00000032581	RRM_1	PF00076.22	1e-08	1	1
ENSSTOP00000030296	RRM_1	PF00076.22	1.1e-08	1	1
ENSSTOP00000012536	U1snRNP70_N	PF12220.8	6.9e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSTOT00000035861	-	255	-	ENSSTOP00000030296	85 (aa)	-	A0A287D9W8
ENSSTOT00000013989	-	831	-	ENSSTOP00000012536	166 (aa)	-	I3MM30
ENSSTOT00000040878	-	258	-	ENSSTOP00000032581	85 (aa)	-	A0A287DG89

Gene Model

Click here to download ENSSTOG00000013988's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSTOG00000013988's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSTOG00000013988	-	100	100.000	ENSG00000104852	SNRNP70	100	100.000	Homo_sapiens
ENSSTOG00000013988	-	86	88.028	ENSAPOG00000009322	snrnp70	89	88.028	Acanthochromis_polyacanthus
ENSSTOG00000013988	-	100	100.000	ENSANAG00000036787	SNRNP70	100	100.000	Aotus_nancymaae
ENSSTOG00000013988	-	100	100.000	ENSBTAG00000048800	-	100	100.000	Bos_taurus
ENSSTOG00000013988	-	100	100.000	ENSCJAG00000000193	SNRNP70	100	100.000	Callithrix_jacchus
ENSSTOG00000013988	-	100	100.000	ENSCAFG00000003711	SNRNP70	100	100.000	Canis_familiaris
ENSSTOG00000013988	-	100	95.833	ENSCAFG00020025470	SNRNP70	100	95.833	Canis_lupus_dingo
ENSSTOG00000013988	-	100	100.000	ENSCHIG00000018534	-	100	100.000	Capra_hircus
ENSSTOG00000013988	-	63	88.571	ENSTSYG00000032350	-	85	88.571	Carlito_syrichta
ENSSTOG00000013988	-	100	98.824	ENSCAPG00000017198	-	100	98.824	Cavia_aperea
ENSSTOG00000013988	-	99	97.561	ENSCANG00000036607	SNRNP70	66	97.561	Colobus_angolensis_palliatus
ENSSTOG00000013988	-	99	88.415	ENSCSEG00000011978	snrnp70	73	88.415	Cynoglossus_semilaevis
ENSSTOG00000013988	-	96	89.937	ENSCVAG00000003912	snrnp70	99	89.937	Cyprinodon_variegatus
ENSSTOG00000013988	-	99	86.585	ENSDARG00000077126	snrnp70	99	88.125	Danio_rerio
ENSSTOG00000013988	-	100	100.000	ENSDNOG00000035849	-	100	100.000	Dasypus_novemcinctus
ENSSTOG00000013988	-	100	100.000	ENSECAG00000013936	-	100	100.000	Equus_caballus
ENSSTOG00000013988	-	99	98.810	ENSFDAG00000013830	SNRNP70	100	97.647	Fukomys_damarensis
ENSSTOG00000013988	-	99	87.805	ENSGMOG00000011492	snrnp70	72	87.805	Gadus_morhua
ENSSTOG00000013988	-	99	88.415	ENSGACG00000000448	snrnp70	52	88.415	Gasterosteus_aculeatus
ENSSTOG00000013988	-	96	80.000	ENSGAGG00000012628	SNRNP70	99	80.000	Gopherus_agassizii
ENSSTOG00000013988	-	100	100.000	ENSGGOG00000008245	SNRNP70	100	100.000	Gorilla_gorilla
ENSSTOG00000013988	-	100	100.000	ENSHGLG00100001651	-	100	100.000	Heterocephalus_glaber_male
ENSSTOG00000013988	-	99	97.561	ENSLAFG00000028536	SNRNP70	71	97.561	Loxodonta_africana
ENSSTOG00000013988	-	100	100.000	ENSMMUG00000004928	SNRNP70	100	100.000	Macaca_mulatta
ENSSTOG00000013988	-	100	100.000	ENSMICG00000038437	SNRNP70	100	100.000	Microcebus_murinus
ENSSTOG00000013988	-	99	97.561	MGP_CAROLIEiJ_G0029714	Snrnp70	100	100.000	Mus_caroli
ENSSTOG00000013988	-	99	97.561	ENSMUSG00000063511	Snrnp70	100	100.000	Mus_musculus
ENSSTOG00000013988	-	99	97.561	MGP_PahariEiJ_G0012939	Snrnp70	100	100.000	Mus_pahari
ENSSTOG00000013988	-	99	97.561	MGP_SPRETEiJ_G0030812	Snrnp70	100	100.000	Mus_spretus
ENSSTOG00000013988	-	99	98.810	ENSNGAG00000021191	Snrnp70	98	98.810	Nannospalax_galili
ENSSTOG00000013988	-	99	89.024	ENSNBRG00000003126	snrnp70	70	89.024	Neolamprologus_brichardi
ENSSTOG00000013988	-	93	100.000	ENSNLEG00000004899	SNRNP70	63	97.468	Nomascus_leucogenys
ENSSTOG00000013988	-	99	96.951	ENSOANG00000005213	SNRNP70	72	96.951	Ornithorhynchus_anatinus
ENSSTOG00000013988	-	100	100.000	ENSPPAG00000035067	SNRNP70	100	100.000	Pan_paniscus
ENSSTOG00000013988	-	100	100.000	ENSPTRG00000011277	SNRNP70	100	100.000	Pan_troglodytes
ENSSTOG00000013988	-	96	80.503	ENSPKIG00000019992	snrnp70	84	80.503	Paramormyrops_kingsleyae
ENSSTOG00000013988	-	98	96.296	ENSPSIG00000015251	SNRNP70	65	96.296	Pelodiscus_sinensis
ENSSTOG00000013988	-	96	90.566	ENSPMGG00000010153	snrnp70	76	90.566	Periophthalmus_magnuspinnatus
ENSSTOG00000013988	-	99	79.878	ENSPMAG00000008502	snrnp70	85	79.878	Petromyzon_marinus
ENSSTOG00000013988	-	93	100.000	ENSPCOG00000023103	SNRNP70	57	85.976	Propithecus_coquereli
ENSSTOG00000013988	-	99	97.561	ENSRBIG00000042387	SNRNP70	61	97.561	Rhinopithecus_bieti
ENSSTOG00000013988	-	99	97.561	ENSRROG00000033636	SNRNP70	61	97.561	Rhinopithecus_roxellana
ENSSTOG00000013988	-	100	100.000	ENSSBOG00000020026	SNRNP70	100	100.000	Saimiri_boliviensis_boliviensis
ENSSTOG00000013988	-	100	100.000	ENSSSCG00000023792	-	100	100.000	Sus_scrofa
ENSSTOG00000013988	-	66	90.000	ENSTNIG00000014186	-	99	90.000	Tetraodon_nigroviridis
ENSSTOG00000013988	-	100	100.000	ENSUMAG00000001467	SNRNP70	100	100.000	Ursus_maritimus
ENSSTOG00000013988	-	79	99.237	ENSVPAG00000005959	-	59	99.237	Vicugna_pacos
ENSSTOG00000013988	-	100	100.000	ENSVVUG00000022976	SNRNP70	100	100.000	Vulpes_vulpes