EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSSTOG00000014133 (Gene tree)
Gene ID
101970172
Gene Symbol
CPSF6
Alias
CFIM|CFIM68|CFIM72|HPBRII-4|HPBRII-7
Full Name
cleavage and polyadenylation specific factor 6
Gene Type
protein_coding
Species
Ictidomys_tridecemlineatus
Status
putative
Strand
Plus strand
Length
32694 bases
Position
chrJH393355.1:7045043-7077736
Accession
101970172
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSTOP00000027504RRM_1PF00076.227.5e-0711
ENSSTOP00000024595RRM_1PF00076.227.6e-0711
ENSSTOP00000012660RRM_1PF00076.229.2e-0711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSTOT00000014133CPSF6-2016787XM_005328760ENSSTOP00000012660618 (aa)XP_005328817I3MMB9
ENSSTOT00000031073CPSF6-2031605-ENSSTOP00000024595534 (aa)-A0A287CTD6
ENSSTOT00000039024CPSF6-2026580-ENSSTOP00000027504531 (aa)-A0A287D1U1
Gene Model
Click here to download ENSSTOG00000014133's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSSTOG00000014133's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSSTOG00000014133CPSF66355.385ENSSTOG00000007708CPSF76758.857
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSTOG00000014133CPSF6100100.000ENSG00000111605CPSF69898.621Homo_sapiens
ENSSTOG00000014133CPSF66857.246ENSG00000149532CPSF79057.471Homo_sapiens
ENSSTOG00000014133CPSF610097.373ENSAMEG00000011781CPSF69898.448Ailuropoda_melanoleuca
ENSSTOG00000014133CPSF66439.698ENSAOCG00000012357CPSF76842.593Amphiprion_ocellaris
ENSSTOG00000014133CPSF6100100.000ENSANAG00000019240CPSF699100.000Aotus_nancymaae
ENSSTOG00000014133CPSF66350.249ENSANAG00000024635CPSF76753.039Aotus_nancymaae
ENSSTOG00000014133CPSF66190.419ENSAMXG00000016745CPSF67090.303Astyanax_mexicanus
ENSSTOG00000014133CPSF66355.385ENSBTAG00000015263CPSF76758.286Bos_taurus
ENSSTOG00000014133CPSF6100100.000ENSBTAG00000007323CPSF69898.448Bos_taurus
ENSSTOG00000014133CPSF67552.747ENSCJAG00000019282CPSF77957.714Callithrix_jacchus
ENSSTOG00000014133CPSF6100100.000ENSCJAG00000001798CPSF698100.000Callithrix_jacchus
ENSSTOG00000014133CPSF6100100.000ENSCAFG00000000424CPSF6100100.000Canis_familiaris
ENSSTOG00000014133CPSF66355.385ENSCAFG00000016152CPSF76758.857Canis_familiaris
ENSSTOG00000014133CPSF66355.385ENSCAFG00020012753CPSF76758.857Canis_lupus_dingo
ENSSTOG00000014133CPSF6100100.000ENSCAFG00020016950CPSF69898.621Canis_lupus_dingo
ENSSTOG00000014133CPSF6100100.000ENSCHIG00000010792CPSF69898.448Capra_hircus
ENSSTOG00000014133CPSF66355.385ENSCHIG00000014655CPSF76758.286Capra_hircus
ENSSTOG00000014133CPSF6100100.000ENSTSYG00000008591CPSF699100.000Carlito_syrichta
ENSSTOG00000014133CPSF66355.385ENSTSYG00000010138-6758.857Carlito_syrichta
ENSSTOG00000014133CPSF66355.385ENSCAPG00000006384CPSF77058.857Cavia_aperea
ENSSTOG00000014133CPSF66355.385ENSCPOG00000009980CPSF76856.000Cavia_porcellus
ENSSTOG00000014133CPSF610099.812ENSCPOG00000015201CPSF69898.276Cavia_porcellus
ENSSTOG00000014133CPSF6100100.000ENSCCAG00000028149CPSF69899.669Cebus_capucinus
ENSSTOG00000014133CPSF66354.872ENSCCAG00000032367CPSF76758.286Cebus_capucinus
ENSSTOG00000014133CPSF66654.872ENSCATG00000042801CPSF77358.286Cercocebus_atys
ENSSTOG00000014133CPSF6100100.000ENSCATG00000039288CPSF69899.668Cercocebus_atys
ENSSTOG00000014133CPSF610099.812ENSCLAG00000010149CPSF610099.812Chinchilla_lanigera
ENSSTOG00000014133CPSF66355.385ENSCLAG00000003174CPSF76758.286Chinchilla_lanigera
ENSSTOG00000014133CPSF610093.486ENSCSAG00000004232CPSF69898.621Chlorocebus_sabaeus
ENSSTOG00000014133CPSF66654.872ENSCSAG00000006414CPSF77358.286Chlorocebus_sabaeus
ENSSTOG00000014133CPSF610097.928ENSCPBG00000013322CPSF69697.928Chrysemys_picta_bellii
ENSSTOG00000014133CPSF65559.441ENSCSAVG00000000161-5463.780Ciona_savignyi
ENSSTOG00000014133CPSF6100100.000ENSCANG00000037294CPSF6100100.000Colobus_angolensis_palliatus
ENSSTOG00000014133CPSF66355.897ENSCGRG00001020382Cpsf76759.429Cricetulus_griseus_chok1gshd
ENSSTOG00000014133CPSF610099.812ENSCGRG00001018082Cpsf69899.812Cricetulus_griseus_chok1gshd
ENSSTOG00000014133CPSF610099.812ENSCGRG00000016909Cpsf6100100.000Cricetulus_griseus_crigri
ENSSTOG00000014133CPSF66754.378ENSCGRG00000017954Cpsf77359.429Cricetulus_griseus_crigri
ENSSTOG00000014133CPSF69480.517ENSCSEG00000008967cpsf69182.306Cynoglossus_semilaevis
ENSSTOG00000014133CPSF65343.299ENSCSEG00000001956CPSF75747.552Cynoglossus_semilaevis
ENSSTOG00000014133CPSF66935.874ENSCVAG00000007392CPSF76644.521Cyprinodon_variegatus
ENSSTOG00000014133CPSF69476.938ENSCVAG00000014857cpsf69179.125Cyprinodon_variegatus
ENSSTOG00000014133CPSF67553.297ENSDNOG00000018517CPSF77958.286Dasypus_novemcinctus
ENSSTOG00000014133CPSF610099.436ENSDNOG00000015292CPSF69699.436Dasypus_novemcinctus
ENSSTOG00000014133CPSF610099.812ENSDORG00000002950Cpsf6100100.000Dipodomys_ordii
ENSSTOG00000014133CPSF610086.092ENSETEG00000002097CPSF69891.379Echinops_telfairi
ENSSTOG00000014133CPSF66354.592ENSETEG00000003765CPSF76856.725Echinops_telfairi
ENSSTOG00000014133CPSF66355.385ENSEASG00005008196CPSF76758.857Equus_asinus_asinus
ENSSTOG00000014133CPSF6100100.000ENSEASG00005008066CPSF69898.621Equus_asinus_asinus
ENSSTOG00000014133CPSF67553.297ENSECAG00000018521CPSF78658.286Equus_caballus
ENSSTOG00000014133CPSF6100100.000ENSECAG00000015988CPSF69898.621Equus_caballus
ENSSTOG00000014133CPSF65062.069ENSEEUG00000005966-6661.017Erinaceus_europaeus
ENSSTOG00000014133CPSF610092.782ENSEEUG00000015039CPSF610099.296Erinaceus_europaeus
ENSSTOG00000014133CPSF67553.297ENSFCAG00000013677CPSF78658.286Felis_catus
ENSSTOG00000014133CPSF610099.812ENSFCAG00000002855CPSF69898.448Felis_catus
ENSSTOG00000014133CPSF66256.452ENSFALG00000011927CPSF77158.140Ficedula_albicollis
ENSSTOG00000014133CPSF610098.120ENSFALG00000010157CPSF69998.120Ficedula_albicollis
ENSSTOG00000014133CPSF610099.812ENSFDAG00000002281CPSF69799.472Fukomys_damarensis
ENSSTOG00000014133CPSF69540.307ENSFDAG00000003919CPSF76856.000Fukomys_damarensis
ENSSTOG00000014133CPSF69473.823ENSFHEG00000019693cpsf69176.836Fundulus_heteroclitus
ENSSTOG00000014133CPSF65192.500ENSGMOG00000012951cpsf65093.388Gadus_morhua
ENSSTOG00000014133CPSF66355.959ENSGALG00000040962CPSF75958.960Gallus_gallus
ENSSTOG00000014133CPSF610097.928ENSGAGG00000010228CPSF69697.928Gopherus_agassizii
ENSSTOG00000014133CPSF610099.812ENSGGOG00000008211CPSF69899.668Gorilla_gorilla
ENSSTOG00000014133CPSF66655.897ENSHGLG00000019090-7358.857Heterocephalus_glaber_female
ENSSTOG00000014133CPSF610099.812ENSHGLG00000000792CPSF69898.103Heterocephalus_glaber_female
ENSSTOG00000014133CPSF66655.897ENSHGLG00100013933-7556.000Heterocephalus_glaber_male
ENSSTOG00000014133CPSF610099.812ENSHGLG00100013861CPSF610099.812Heterocephalus_glaber_male
ENSSTOG00000014133CPSF610099.812ENSJJAG00000014647Cpsf6100100.000Jaculus_jaculus
ENSSTOG00000014133CPSF66655.385ENSJJAG00000019390Cpsf77358.857Jaculus_jaculus
ENSSTOG00000014133CPSF68140.341ENSLBEG00000000947CPSF78033.010Labrus_bergylta
ENSSTOG00000014133CPSF66544.231ENSLACG00000005542CPSF76944.231Latimeria_chalumnae
ENSSTOG00000014133CPSF66595.294ENSLOCG00000016190cpsf66395.294Lepisosteus_oculatus
ENSSTOG00000014133CPSF6100100.000ENSLAFG00000030413CPSF696100.000Loxodonta_africana
ENSSTOG00000014133CPSF66355.897ENSLAFG00000032084CPSF76759.429Loxodonta_africana
ENSSTOG00000014133CPSF66354.872ENSMFAG00000001401CPSF76958.286Macaca_fascicularis
ENSSTOG00000014133CPSF6100100.000ENSMFAG00000045318CPSF69899.668Macaca_fascicularis
ENSSTOG00000014133CPSF610099.812ENSMMUG00000002921CPSF69898.451Macaca_mulatta
ENSSTOG00000014133CPSF66654.872ENSMMUG00000015280CPSF77358.286Macaca_mulatta
ENSSTOG00000014133CPSF6100100.000ENSMNEG00000036311CPSF698100.000Macaca_nemestrina
ENSSTOG00000014133CPSF66654.872ENSMNEG00000029585CPSF77358.286Macaca_nemestrina
ENSSTOG00000014133CPSF66354.872ENSMLEG00000031269CPSF76958.286Mandrillus_leucophaeus
ENSSTOG00000014133CPSF6100100.000ENSMLEG00000003957CPSF6100100.000Mandrillus_leucophaeus
ENSSTOG00000014133CPSF610095.113ENSMGAG00000010552CPSF69795.113Meleagris_gallopavo
ENSSTOG00000014133CPSF69544.231ENSMGAG00000004876CPSF75961.446Meleagris_gallopavo
ENSSTOG00000014133CPSF6100100.000ENSMAUG00000013240Cpsf69898.621Mesocricetus_auratus
ENSSTOG00000014133CPSF66355.385ENSMAUG00000013020Cpsf76758.857Mesocricetus_auratus
ENSSTOG00000014133CPSF66355.385ENSMICG00000013788CPSF76758.857Microcebus_murinus
ENSSTOG00000014133CPSF610099.812ENSMICG00000007385-98100.000Microcebus_murinus
ENSSTOG00000014133CPSF610099.812ENSMOCG00000013982Cpsf69898.621Microtus_ochrogaster
ENSSTOG00000014133CPSF66355.385ENSMOCG00000000072Cpsf76758.857Microtus_ochrogaster
ENSSTOG00000014133CPSF66352.792ENSMODG00000020364CPSF76857.386Monodelphis_domestica
ENSSTOG00000014133CPSF610099.247ENSMODG00000007123CPSF69699.247Monodelphis_domestica
ENSSTOG00000014133CPSF67390.155ENSMALG00000014908cpsf67591.525Monopterus_albus
ENSSTOG00000014133CPSF66355.385MGP_CAROLIEiJ_G0022690Cpsf76758.857Mus_caroli
ENSSTOG00000014133CPSF6100100.000MGP_CAROLIEiJ_G0015834Cpsf69898.621Mus_caroli
ENSSTOG00000014133CPSF610099.623ENSMUSG00000055531Cpsf69898.276Mus_musculus
ENSSTOG00000014133CPSF66355.385ENSMUSG00000034820Cpsf76758.857Mus_musculus
ENSSTOG00000014133CPSF68199.621MGP_PahariEiJ_G0031253Cpsf68399.289Mus_pahari
ENSSTOG00000014133CPSF66355.385MGP_PahariEiJ_G0014184Cpsf76758.857Mus_pahari
ENSSTOG00000014133CPSF66355.385MGP_SPRETEiJ_G0023604Cpsf76758.857Mus_spretus
ENSSTOG00000014133CPSF610099.623MGP_SPRETEiJ_G0016657Cpsf69898.276Mus_spretus
ENSSTOG00000014133CPSF610097.744ENSMPUG00000017502CPSF69797.744Mustela_putorius_furo
ENSSTOG00000014133CPSF66354.359ENSMPUG00000014163CPSF76657.714Mustela_putorius_furo
ENSSTOG00000014133CPSF67094.928ENSMLUG00000028728-8894.898Myotis_lucifugus
ENSSTOG00000014133CPSF66655.385ENSMLUG00000013278CPSF77358.857Myotis_lucifugus
ENSSTOG00000014133CPSF610097.744ENSMLUG00000004172-9797.744Myotis_lucifugus
ENSSTOG00000014133CPSF67285.246ENSMLUG00000023960-7783.784Myotis_lucifugus
ENSSTOG00000014133CPSF610099.812ENSNGAG00000015901Cpsf69898.621Nannospalax_galili
ENSSTOG00000014133CPSF66355.385ENSNGAG00000005031Cpsf76758.857Nannospalax_galili
ENSSTOG00000014133CPSF6100100.000ENSNLEG00000003798CPSF698100.000Nomascus_leucogenys
ENSSTOG00000014133CPSF66354.872ENSNLEG00000002529CPSF76158.286Nomascus_leucogenys
ENSSTOG00000014133CPSF69495.172ENSMEUG00000015041CPSF69895.172Notamacropus_eugenii
ENSSTOG00000014133CPSF66354.082ENSMEUG00000002261CPSF76758.721Notamacropus_eugenii
ENSSTOG00000014133CPSF610093.134ENSOPRG00000005199CPSF610099.472Ochotona_princeps
ENSSTOG00000014133CPSF67882.443ENSODEG00000007109-6680.576Octodon_degus
ENSSTOG00000014133CPSF610097.744ENSODEG00000018399-9697.744Octodon_degus
ENSSTOG00000014133CPSF66353.030ENSODEG00000002610CPSF76855.618Octodon_degus
ENSSTOG00000014133CPSF673100.000ENSODEG00000004418-9098.800Octodon_degus
ENSSTOG00000014133CPSF66884.231ENSONIG00000011702cpsf69180.478Oreochromis_niloticus
ENSSTOG00000014133CPSF69480.240ENSOANG00000005944CPSF65087.121Ornithorhynchus_anatinus
ENSSTOG00000014133CPSF69941.016ENSOCUG00000024726CPSF76758.286Oryctolagus_cuniculus
ENSSTOG00000014133CPSF610093.486ENSOCUG00000013505CPSF69898.621Oryctolagus_cuniculus
ENSSTOG00000014133CPSF67535.931ENSORLG00000006495CPSF75549.558Oryzias_latipes
ENSSTOG00000014133CPSF69482.376ENSORLG00000013893cpsf69172.275Oryzias_latipes
ENSSTOG00000014133CPSF67436.087ENSORLG00020012657CPSF75549.558Oryzias_latipes_hni
ENSSTOG00000014133CPSF69482.376ENSORLG00020016593cpsf69172.275Oryzias_latipes_hni
ENSSTOG00000014133CPSF69482.376ENSORLG00015015558cpsf69172.275Oryzias_latipes_hsok
ENSSTOG00000014133CPSF67338.028ENSOMEG00000000539CPSF77037.267Oryzias_melastigma
ENSSTOG00000014133CPSF610097.368ENSOGAG00000031988CPSF69997.368Otolemur_garnettii
ENSSTOG00000014133CPSF66355.385ENSOGAG00000027958CPSF76258.857Otolemur_garnettii
ENSSTOG00000014133CPSF66355.385ENSOARG00000012937CPSF76158.286Ovis_aries
ENSSTOG00000014133CPSF610093.322ENSOARG00000020532CPSF610099.813Ovis_aries
ENSSTOG00000014133CPSF610090.685ENSPPAG00000005301CPSF69897.023Pan_paniscus
ENSSTOG00000014133CPSF66354.872ENSPPAG00000028232CPSF76958.286Pan_paniscus
ENSSTOG00000014133CPSF610099.812ENSPPRG00000021620CPSF69898.448Panthera_pardus
ENSSTOG00000014133CPSF66355.385ENSPPRG00000008538CPSF76758.857Panthera_pardus
ENSSTOG00000014133CPSF69499.800ENSPTIG00000004079CPSF610099.813Panthera_tigris_altaica
ENSSTOG00000014133CPSF66355.385ENSPTIG00000021699CPSF76758.857Panthera_tigris_altaica
ENSSTOG00000014133CPSF610099.812ENSPTRG00000005205CPSF69899.668Pan_troglodytes
ENSSTOG00000014133CPSF66354.872ENSPTRG00000003742CPSF76958.286Pan_troglodytes
ENSSTOG00000014133CPSF66354.872ENSPANG00000006037CPSF76958.286Papio_anubis
ENSSTOG00000014133CPSF6100100.000ENSPANG00000011641CPSF69899.668Papio_anubis
ENSSTOG00000014133CPSF69481.873ENSPKIG00000003081-9182.236Paramormyrops_kingsleyae
ENSSTOG00000014133CPSF65948.023ENSPKIG00000018054CPSF77444.681Paramormyrops_kingsleyae
ENSSTOG00000014133CPSF65394.512ENSPSIG00000016360CPSF67694.512Pelodiscus_sinensis
ENSSTOG00000014133CPSF610099.624ENSPEMG00000007973Cpsf610099.824Peromyscus_maniculatus_bairdii
ENSSTOG00000014133CPSF66655.385ENSPEMG00000012648Cpsf77358.857Peromyscus_maniculatus_bairdii
ENSSTOG00000014133CPSF66352.736ENSPCIG00000002551CPSF78155.191Phascolarctos_cinereus
ENSSTOG00000014133CPSF610099.247ENSPCIG00000019063CPSF69897.931Phascolarctos_cinereus
ENSSTOG00000014133CPSF67683.815ENSPFOG00000006990cpsf65381.853Poecilia_formosa
ENSSTOG00000014133CPSF69478.926ENSPLAG00000005715cpsf69181.028Poecilia_latipinna
ENSSTOG00000014133CPSF69478.926ENSPMEG00000001353cpsf69181.028Poecilia_mexicana
ENSSTOG00000014133CPSF610099.812ENSPPYG00000004756CPSF69699.812Pongo_abelii
ENSSTOG00000014133CPSF66354.872ENSPPYG00000003188CPSF76758.286Pongo_abelii
ENSSTOG00000014133CPSF610093.486ENSPCAG00000011574CPSF69898.621Procavia_capensis
ENSSTOG00000014133CPSF610099.624ENSPCOG00000024384CPSF69899.338Propithecus_coquereli
ENSSTOG00000014133CPSF66355.385ENSPCOG00000011976CPSF76758.857Propithecus_coquereli
ENSSTOG00000014133CPSF610092.958ENSPVAG00000015753CPSF69898.103Pteropus_vampyrus
ENSSTOG00000014133CPSF66355.385ENSPVAG00000010675CPSF76758.857Pteropus_vampyrus
ENSSTOG00000014133CPSF65646.497ENSPNAG00000015073CPSF76847.879Pygocentrus_nattereri
ENSSTOG00000014133CPSF66654.872ENSRNOG00000020668Cpsf77358.721Rattus_norvegicus
ENSSTOG00000014133CPSF610099.812ENSRNOG00000005927Cpsf69699.812Rattus_norvegicus
ENSSTOG00000014133CPSF610099.624ENSRBIG00000042827CPSF69899.336Rhinopithecus_bieti
ENSSTOG00000014133CPSF67552.747ENSRBIG00000031429CPSF78657.714Rhinopithecus_bieti
ENSSTOG00000014133CPSF66354.872ENSRROG00000045009CPSF76758.286Rhinopithecus_roxellana
ENSSTOG00000014133CPSF610099.812ENSRROG00000042758CPSF69899.667Rhinopithecus_roxellana
ENSSTOG00000014133CPSF66354.872ENSSBOG00000018431CPSF76758.286Saimiri_boliviensis_boliviensis
ENSSTOG00000014133CPSF694100.000ENSSBOG00000010652CPSF6100100.000Saimiri_boliviensis_boliviensis
ENSSTOG00000014133CPSF66354.822ENSSHAG00000011964CPSF76759.302Sarcophilus_harrisii
ENSSTOG00000014133CPSF69482.937ENSSFOG00015015803CPSF69180.318Scleropages_formosus
ENSSTOG00000014133CPSF69478.926ENSSFOG00015001688CPSF67981.673Scleropages_formosus
ENSSTOG00000014133CPSF67542.130ENSSFOG00015010288cpsf77340.659Scleropages_formosus
ENSSTOG00000014133CPSF69399.526ENSSARG00000006743CPSF69192.737Sorex_araneus
ENSSTOG00000014133CPSF66356.250ENSSPUG00000019344CPSF76956.977Sphenodon_punctatus
ENSSTOG00000014133CPSF69492.279ENSSPUG00000001238CPSF69792.705Sphenodon_punctatus
ENSSTOG00000014133CPSF6100100.000ENSSSCG00000038031CPSF6100100.000Sus_scrofa
ENSSTOG00000014133CPSF67553.297ENSSSCG00000013083CPSF77958.286Sus_scrofa
ENSSTOG00000014133CPSF66054.444ENSTGUG00000006513CPSF76856.322Taeniopygia_guttata
ENSSTOG00000014133CPSF66354.872ENSTTRG00000011085CPSF77058.857Tursiops_truncatus
ENSSTOG00000014133CPSF694100.000ENSUAMG00000023492CPSF6100100.000Ursus_americanus
ENSSTOG00000014133CPSF66355.385ENSUAMG00000017809CPSF76758.857Ursus_americanus
ENSSTOG00000014133CPSF66655.385ENSUMAG00000011825CPSF77358.857Ursus_maritimus
ENSSTOG00000014133CPSF694100.000ENSUMAG00000020779CPSF6100100.000Ursus_maritimus
ENSSTOG00000014133CPSF610093.486ENSVPAG00000008469CPSF6100100.000Vicugna_pacos
ENSSTOG00000014133CPSF69493.097ENSVVUG00000010156-100100.000Vulpes_vulpes
ENSSTOG00000014133CPSF67553.297ENSVVUG00000004939CPSF77958.286Vulpes_vulpes
ENSSTOG00000014133CPSF69640.381ENSXETG00000006715cpsf76353.571Xenopus_tropicalis

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