EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSTOG00000014181 (Gene tree)
Gene ID: -
Gene Symbol: SRRM3
Alias: FLJ37078
Full Name: serine/arginine repetitive matrix 3
Gene Type: protein_coding
Species: Ictidomys_tridecemlineatus
Status: putative
Strand: Minus strand
Length: 52697 bases
Position: chrJH393353.1:2121141-2173837
Accession: 26729
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSTOP00000026932	cwf21	PF08312.12	3.1e-16	1	1
ENSSTOP00000012710	cwf21	PF08312.12	5.2e-15	1	1
ENSSTOP00000012710	SRRM_C	PF15230.6	6.7e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSTOT00000014188	SRRM3-202	1665	XM_013360023	ENSSTOP00000012710	554 (aa)	-	I3MMF6
ENSSTOT00000035399	SRRM3-201	3289	-	ENSSTOP00000026932	124 (aa)	-	A0A287D043

Gene Model

Click here to download ENSSTOG00000014181's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSTOG00000014181's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSTOG00000014181	SRRM3	100	91.129	ENSG00000177679	SRRM3	83	91.346	Homo_sapiens
ENSSTOG00000014181	SRRM3	78	61.983	ENSAPOG00000000288	SRRM3	53	50.862	Acanthochromis_polyacanthus
ENSSTOG00000014181	SRRM3	93	74.783	ENSACAG00000000452	SRRM3	80	64.706	Anolis_carolinensis
ENSSTOG00000014181	SRRM3	100	95.161	ENSANAG00000031983	SRRM3	56	83.523	Aotus_nancymaae
ENSSTOG00000014181	SRRM3	100	91.129	ENSBTAG00000007879	-	98	82.831	Bos_taurus
ENSSTOG00000014181	SRRM3	100	94.355	ENSCJAG00000016307	SRRM3	85	92.788	Callithrix_jacchus
ENSSTOG00000014181	SRRM3	100	92.742	ENSCAFG00000013537	SRRM3	82	90.154	Canis_familiaris
ENSSTOG00000014181	SRRM3	100	92.742	ENSCAFG00020013073	SRRM3	78	92.228	Canis_lupus_dingo
ENSSTOG00000014181	SRRM3	100	90.323	ENSCHIG00000014018	SRRM3	80	87.313	Capra_hircus
ENSSTOG00000014181	SRRM3	65	90.123	ENSCPOG00000038685	SRRM3	85	89.904	Cavia_porcellus
ENSSTOG00000014181	SRRM3	100	95.161	ENSCCAG00000033359	SRRM3	83	93.373	Cebus_capucinus
ENSSTOG00000014181	SRRM3	100	95.161	ENSCATG00000043129	SRRM3	100	80.656	Cercocebus_atys
ENSSTOG00000014181	SRRM3	100	93.548	ENSCLAG00000007682	SRRM3	100	93.548	Chinchilla_lanigera
ENSSTOG00000014181	SRRM3	100	94.355	ENSCSAG00000018140	SRRM3	80	92.486	Chlorocebus_sabaeus
ENSSTOG00000014181	SRRM3	90	81.250	ENSCPBG00000027784	SRRM3	73	65.361	Chrysemys_picta_bellii
ENSSTOG00000014181	SRRM3	100	91.129	ENSCGRG00001011385	Srrm3	78	90.663	Cricetulus_griseus_chok1gshd
ENSSTOG00000014181	SRRM3	94	89.744	ENSDNOG00000046922	SRRM3	66	90.647	Dasypus_novemcinctus
ENSSTOG00000014181	SRRM3	100	91.129	ENSEASG00005016840	-	88	92.192	Equus_asinus_asinus
ENSSTOG00000014181	SRRM3	100	90.323	ENSECAG00000022142	-	88	92.169	Equus_caballus
ENSSTOG00000014181	SRRM3	100	91.129	ENSFCAG00000044112	SRRM3	83	93.750	Felis_catus
ENSSTOG00000014181	SRRM3	90	78.571	ENSFALG00000009603	SRRM3	67	69.097	Ficedula_albicollis
ENSSTOG00000014181	SRRM3	65	96.296	ENSFDAG00000016913	SRRM3	100	96.296	Fukomys_damarensis
ENSSTOG00000014181	SRRM3	97	75.833	ENSGALG00000001932	SRRM3	65	68.621	Gallus_gallus
ENSSTOG00000014181	SRRM3	90	80.357	ENSGAGG00000021058	SRRM3	78	64.458	Gopherus_agassizii
ENSSTOG00000014181	SRRM3	100	92.742	ENSHGLG00000015576	SRRM3	100	92.742	Heterocephalus_glaber_female
ENSSTOG00000014181	SRRM3	97	89.474	ENSJJAG00000023441	Srrm3	83	89.474	Jaculus_jaculus
ENSSTOG00000014181	SRRM3	61	78.788	ENSLACG00000008008	SRRM3	70	53.691	Latimeria_chalumnae
ENSSTOG00000014181	SRRM3	89	75.439	ENSLOCG00000002879	SRRM3	59	60.465	Lepisosteus_oculatus
ENSSTOG00000014181	SRRM3	97	75.833	ENSMGAG00000003690	SRRM3	75	65.972	Meleagris_gallopavo
ENSSTOG00000014181	SRRM3	100	90.323	ENSMAUG00000017613	Srrm3	100	90.323	Mesocricetus_auratus
ENSSTOG00000014181	SRRM3	100	93.548	ENSMICG00000010668	SRRM3	100	85.349	Microcebus_murinus
ENSSTOG00000014181	SRRM3	100	90.323	ENSMOCG00000002565	Srrm3	78	90.361	Microtus_ochrogaster
ENSSTOG00000014181	SRRM3	94	86.207	ENSMODG00000029593	SRRM3	62	85.455	Monodelphis_domestica
ENSSTOG00000014181	SRRM3	100	91.935	MGP_CAROLIEiJ_G0027845	-	97	90.361	Mus_caroli
ENSSTOG00000014181	SRRM3	100	91.935	ENSMUSG00000039860	Srrm3	100	91.935	Mus_musculus
ENSSTOG00000014181	SRRM3	100	91.129	MGP_PahariEiJ_G0024425	Srrm3	100	91.129	Mus_pahari
ENSSTOG00000014181	SRRM3	100	92.742	MGP_SPRETEiJ_G0028844	Srrm3	100	92.742	Mus_spretus
ENSSTOG00000014181	SRRM3	100	87.097	ENSNLEG00000008423	-	100	68.852	Nomascus_leucogenys
ENSSTOG00000014181	SRRM3	100	90.323	ENSODEG00000015988	SRRM3	85	91.618	Octodon_degus
ENSSTOG00000014181	SRRM3	98	72.131	ENSOANG00000004590	-	55	65.000	Ornithorhynchus_anatinus
ENSSTOG00000014181	SRRM3	78	55.738	ENSORLG00020016592	-	55	47.660	Oryzias_latipes_hni
ENSSTOG00000014181	SRRM3	84	54.264	ENSORLG00015022712	SRRM3	55	47.234	Oryzias_latipes_hsok
ENSSTOG00000014181	SRRM3	98	90.984	ENSOGAG00000030805	SRRM3	82	91.515	Otolemur_garnettii
ENSSTOG00000014181	SRRM3	100	92.742	ENSPTRG00000019317	SRRM3	83	92.308	Pan_troglodytes
ENSSTOG00000014181	SRRM3	88	75.229	ENSPKIG00000017233	SRRM3	57	59.906	Paramormyrops_kingsleyae
ENSSTOG00000014181	SRRM3	100	92.742	ENSPEMG00000012358	-	100	92.742	Peromyscus_maniculatus_bairdii
ENSSTOG00000014181	SRRM3	100	66.129	ENSPCAG00000013700	SRRM3	76	80.165	Procavia_capensis
ENSSTOG00000014181	SRRM3	100	91.935	ENSPCOG00000028464	SRRM3	83	92.788	Propithecus_coquereli
ENSSTOG00000014181	SRRM3	100	90.323	ENSRNOG00000001439	Srrm3	78	90.060	Rattus_norvegicus
ENSSTOG00000014181	SRRM3	100	94.355	ENSRROG00000034980	SRRM3	100	85.018	Rhinopithecus_roxellana
ENSSTOG00000014181	SRRM3	89	79.091	ENSSPUG00000006285	SRRM3	65	79.091	Sphenodon_punctatus
ENSSTOG00000014181	SRRM3	90	93.694	ENSTTRG00000014836	-	61	82.645	Tursiops_truncatus