EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSTOG00000014635 (Gene tree)
Gene ID: 101956563
Gene Symbol: SNRNP48
Alias: C6orf151|FLJ32234|dJ336K20B.1|dJ512B11.2
Full Name: small nuclear ribonucleoprotein U11/U12 subunit 48
Gene Type: protein_coding
Species: Ictidomys_tridecemlineatus
Status: putative
Strand: Minus strand
Length: 17913 bases
Position: chrJH393344.1:5007360-5025272
Accession: 101956563
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSTOP00000013112	zf-U11-48K	PF05253.12	1.1e-09	1	1
ENSSTOP00000027614	zf-U11-48K	PF05253.12	1.6e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSTOT00000014635	SNRNP48-202	807	-	ENSSTOP00000013112	268 (aa)	-	I3MNA7
ENSSTOT00000039750	SNRNP48-201	2091	XM_005327485	ENSSTOP00000027614	339 (aa)	XP_005327542	A0A287D250

Gene Model

Click here to download ENSSTOG00000014635's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSTOG00000014635's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSTOG00000014635	SNRNP48	100	97.000	ENSG00000168566	SNRNP48	100	94.395	Homo_sapiens
ENSSTOG00000014635	SNRNP48	97	43.068	ENSAPOG00000021430	snrnp48	96	42.165	Acanthochromis_polyacanthus
ENSSTOG00000014635	SNRNP48	99	90.533	ENSAMEG00000017349	SNRNP48	100	89.625	Ailuropoda_melanoleuca
ENSSTOG00000014635	SNRNP48	88	46.358	ENSACIG00000002032	snrnp48	82	46.831	Amphilophus_citrinellus
ENSSTOG00000014635	SNRNP48	81	47.703	ENSAOCG00000010562	snrnp48	96	42.693	Amphiprion_ocellaris
ENSSTOG00000014635	SNRNP48	81	48.043	ENSAPEG00000003231	snrnp48	96	42.899	Amphiprion_percula
ENSSTOG00000014635	SNRNP48	77	49.632	ENSATEG00000020210	snrnp48	81	50.000	Anabas_testudineus
ENSSTOG00000014635	SNRNP48	83	64.384	ENSACAG00000002811	SNRNP48	90	64.384	Anolis_carolinensis
ENSSTOG00000014635	SNRNP48	100	96.000	ENSANAG00000033538	SNRNP48	100	93.805	Aotus_nancymaae
ENSSTOG00000014635	SNRNP48	94	46.462	ENSAMXG00000015309	snrnp48	85	48.611	Astyanax_mexicanus
ENSSTOG00000014635	SNRNP48	100	87.353	ENSBTAG00000001123	SNRNP48	100	88.235	Bos_taurus
ENSSTOG00000014635	SNRNP48	100	97.000	ENSCJAG00000021330	SNRNP48	100	93.805	Callithrix_jacchus
ENSSTOG00000014635	SNRNP48	99	92.560	ENSCAFG00000009574	SNRNP48	83	92.560	Canis_familiaris
ENSSTOG00000014635	SNRNP48	99	92.857	ENSCAFG00020013203	SNRNP48	99	92.857	Canis_lupus_dingo
ENSSTOG00000014635	SNRNP48	100	88.824	ENSCHIG00000015216	SNRNP48	100	89.706	Capra_hircus
ENSSTOG00000014635	SNRNP48	100	95.000	ENSTSYG00000000698	SNRNP48	100	92.330	Carlito_syrichta
ENSSTOG00000014635	SNRNP48	91	87.987	ENSCAPG00000006768	SNRNP48	100	87.987	Cavia_aperea
ENSSTOG00000014635	SNRNP48	100	91.740	ENSCPOG00000007910	SNRNP48	100	91.740	Cavia_porcellus
ENSSTOG00000014635	SNRNP48	100	94.000	ENSCCAG00000035652	SNRNP48	100	92.330	Cebus_capucinus
ENSSTOG00000014635	SNRNP48	100	96.000	ENSCATG00000033947	SNRNP48	100	93.805	Cercocebus_atys
ENSSTOG00000014635	SNRNP48	100	94.000	ENSCLAG00000003765	SNRNP48	100	92.625	Chinchilla_lanigera
ENSSTOG00000014635	SNRNP48	100	97.000	ENSCSAG00000007409	SNRNP48	100	94.395	Chlorocebus_sabaeus
ENSSTOG00000014635	SNRNP48	85	64.474	ENSCPBG00000019146	SNRNP48	92	64.474	Chrysemys_picta_bellii
ENSSTOG00000014635	SNRNP48	94	30.154	ENSCING00000004121	-	70	33.333	Ciona_intestinalis
ENSSTOG00000014635	SNRNP48	100	97.000	ENSCANG00000030017	SNRNP48	100	94.395	Colobus_angolensis_palliatus
ENSSTOG00000014635	SNRNP48	100	92.000	ENSCGRG00001001076	-	100	90.855	Cricetulus_griseus_chok1gshd
ENSSTOG00000014635	SNRNP48	99	72.537	ENSCGRG00001008805	-	95	71.940	Cricetulus_griseus_chok1gshd
ENSSTOG00000014635	SNRNP48	100	92.000	ENSCGRG00000007781	Snrnp48	100	90.855	Cricetulus_griseus_crigri
ENSSTOG00000014635	SNRNP48	77	48.289	ENSCSEG00000000722	snrnp48	72	48.659	Cynoglossus_semilaevis
ENSSTOG00000014635	SNRNP48	88	46.580	ENSCVAG00000019829	snrnp48	70	48.913	Cyprinodon_variegatus
ENSSTOG00000014635	SNRNP48	81	46.831	ENSDARG00000039989	snrnp48	83	46.552	Danio_rerio
ENSSTOG00000014635	SNRNP48	100	91.176	ENSDNOG00000014978	SNRNP48	100	91.176	Dasypus_novemcinctus
ENSSTOG00000014635	SNRNP48	99	91.919	ENSDORG00000015140	Snrnp48	100	91.176	Dipodomys_ordii
ENSSTOG00000014635	SNRNP48	66	35.676	ENSEBUG00000016376	-	89	35.577	Eptatretus_burgeri
ENSSTOG00000014635	SNRNP48	99	93.195	ENSEASG00005012021	SNRNP48	100	92.920	Equus_asinus_asinus
ENSSTOG00000014635	SNRNP48	100	94.000	ENSECAG00000026937	SNRNP48	100	93.805	Equus_caballus
ENSSTOG00000014635	SNRNP48	100	82.178	ENSEEUG00000015437	SNRNP48	99	69.412	Erinaceus_europaeus
ENSSTOG00000014635	SNRNP48	88	47.386	ENSELUG00000009766	snrnp48	78	48.239	Esox_lucius
ENSSTOG00000014635	SNRNP48	100	93.215	ENSFCAG00000018853	SNRNP48	100	93.215	Felis_catus
ENSSTOG00000014635	SNRNP48	83	66.096	ENSFALG00000007797	SNRNP48	93	66.096	Ficedula_albicollis
ENSSTOG00000014635	SNRNP48	99	92.308	ENSFDAG00000009231	SNRNP48	100	92.035	Fukomys_damarensis
ENSSTOG00000014635	SNRNP48	59	55.941	ENSFHEG00000014647	snrnp48	97	45.791	Fundulus_heteroclitus
ENSSTOG00000014635	SNRNP48	73	46.774	ENSGMOG00000018599	-	86	44.876	Gadus_morhua
ENSSTOG00000014635	SNRNP48	78	67.636	ENSGALG00000013005	SNRNP48	85	67.984	Gallus_gallus
ENSSTOG00000014635	SNRNP48	73	50.781	ENSGAFG00000021639	snrnp48	81	43.807	Gambusia_affinis
ENSSTOG00000014635	SNRNP48	71	50.413	ENSGACG00000017756	-	84	48.084	Gasterosteus_aculeatus
ENSSTOG00000014635	SNRNP48	84	63.576	ENSGAGG00000000865	SNRNP48	97	63.576	Gopherus_agassizii
ENSSTOG00000014635	SNRNP48	100	97.000	ENSGGOG00000013220	SNRNP48	100	94.395	Gorilla_gorilla
ENSSTOG00000014635	SNRNP48	98	43.491	ENSHBUG00000017066	snrnp48	97	40.730	Haplochromis_burtoni
ENSSTOG00000014635	SNRNP48	99	95.960	ENSHGLG00000015241	SNRNP48	100	92.920	Heterocephalus_glaber_female
ENSSTOG00000014635	SNRNP48	99	95.960	ENSHGLG00100010027	SNRNP48	100	92.920	Heterocephalus_glaber_male
ENSSTOG00000014635	SNRNP48	72	46.748	ENSHCOG00000014066	snrnp48	81	44.792	Hippocampus_comes
ENSSTOG00000014635	SNRNP48	100	86.726	ENSJJAG00000011495	Snrnp48	100	86.726	Jaculus_jaculus
ENSSTOG00000014635	SNRNP48	87	46.465	ENSKMAG00000016514	snrnp48	80	46.619	Kryptolebias_marmoratus
ENSSTOG00000014635	SNRNP48	78	47.761	ENSLBEG00000026249	snrnp48	97	42.776	Labrus_bergylta
ENSSTOG00000014635	SNRNP48	98	53.709	ENSLACG00000003958	SNRNP48	99	52.601	Latimeria_chalumnae
ENSSTOG00000014635	SNRNP48	83	50.865	ENSLOCG00000004187	snrnp48	95	48.665	Lepisosteus_oculatus
ENSSTOG00000014635	SNRNP48	100	89.086	ENSLAFG00000011152	SNRNP48	100	89.086	Loxodonta_africana
ENSSTOG00000014635	SNRNP48	100	97.000	ENSMFAG00000045216	SNRNP48	100	94.690	Macaca_fascicularis
ENSSTOG00000014635	SNRNP48	100	97.000	ENSMMUG00000014785	SNRNP48	100	94.690	Macaca_mulatta
ENSSTOG00000014635	SNRNP48	100	97.000	ENSMNEG00000042269	SNRNP48	100	94.395	Macaca_nemestrina
ENSSTOG00000014635	SNRNP48	100	97.000	ENSMLEG00000034004	SNRNP48	100	94.690	Mandrillus_leucophaeus
ENSSTOG00000014635	SNRNP48	76	48.289	ENSMAMG00000018673	snrnp48	71	47.887	Mastacembelus_armatus
ENSSTOG00000014635	SNRNP48	83	65.986	ENSMGAG00000006037	SNRNP48	99	65.753	Meleagris_gallopavo
ENSSTOG00000014635	SNRNP48	100	92.330	ENSMAUG00000011944	Snrnp48	100	91.445	Mesocricetus_auratus
ENSSTOG00000014635	SNRNP48	100	92.000	ENSMICG00000012497	SNRNP48	100	91.740	Microcebus_murinus
ENSSTOG00000014635	SNRNP48	100	91.740	ENSMOCG00000015555	Snrnp48	100	90.855	Microtus_ochrogaster
ENSSTOG00000014635	SNRNP48	54	52.432	ENSMMOG00000003072	-	58	52.432	Mola_mola
ENSSTOG00000014635	SNRNP48	98	71.221	ENSMODG00000009996	SNRNP48	93	71.221	Monodelphis_domestica
ENSSTOG00000014635	SNRNP48	74	50.394	ENSMALG00000005725	snrnp48	80	48.043	Monopterus_albus
ENSSTOG00000014635	SNRNP48	100	90.855	MGP_CAROLIEiJ_G0018441	Snrnp48	100	89.971	Mus_caroli
ENSSTOG00000014635	SNRNP48	100	90.265	ENSMUSG00000021431	Snrnp48	100	89.381	Mus_musculus
ENSSTOG00000014635	SNRNP48	100	90.560	MGP_PahariEiJ_G0019509	Snrnp48	100	89.676	Mus_pahari
ENSSTOG00000014635	SNRNP48	100	89.676	MGP_SPRETEiJ_G0019321	Snrnp48	100	88.791	Mus_spretus
ENSSTOG00000014635	SNRNP48	99	90.909	ENSNGAG00000004849	Snrnp48	99	89.941	Nannospalax_galili
ENSSTOG00000014635	SNRNP48	76	47.893	ENSNBRG00000012127	snrnp48	84	45.918	Neolamprologus_brichardi
ENSSTOG00000014635	SNRNP48	100	97.000	ENSNLEG00000011667	SNRNP48	100	94.690	Nomascus_leucogenys
ENSSTOG00000014635	SNRNP48	95	80.805	ENSOPRG00000015471	SNRNP48	100	80.495	Ochotona_princeps
ENSSTOG00000014635	SNRNP48	50	77.027	ENSODEG00000005816	-	95	77.027	Octodon_degus
ENSSTOG00000014635	SNRNP48	76	47.893	ENSONIG00000001520	snrnp48	84	45.918	Oreochromis_niloticus
ENSSTOG00000014635	SNRNP48	61	61.453	ENSOANG00000019888	-	100	64.904	Ornithorhynchus_anatinus
ENSSTOG00000014635	SNRNP48	84	90.909	ENSOCUG00000005168	SNRNP48	100	90.461	Oryctolagus_cuniculus
ENSSTOG00000014635	SNRNP48	88	47.078	ENSORLG00000015654	snrnp48	82	47.931	Oryzias_latipes
ENSSTOG00000014635	SNRNP48	88	46.104	ENSORLG00020015976	snrnp48	70	46.897	Oryzias_latipes_hni
ENSSTOG00000014635	SNRNP48	88	47.078	ENSORLG00015022379	snrnp48	71	47.931	Oryzias_latipes_hsok
ENSSTOG00000014635	SNRNP48	82	47.535	ENSOMEG00000022007	snrnp48	82	47.917	Oryzias_melastigma
ENSSTOG00000014635	SNRNP48	92	91.640	ENSOGAG00000005275	SNRNP48	96	91.798	Otolemur_garnettii
ENSSTOG00000014635	SNRNP48	85	88.850	ENSOARG00000017319	SNRNP48	100	88.850	Ovis_aries
ENSSTOG00000014635	SNRNP48	100	97.000	ENSPPAG00000032873	SNRNP48	100	94.690	Pan_paniscus
ENSSTOG00000014635	SNRNP48	100	93.510	ENSPPRG00000004283	SNRNP48	100	93.510	Panthera_pardus
ENSSTOG00000014635	SNRNP48	85	94.077	ENSPTIG00000013502	SNRNP48	100	94.077	Panthera_tigris_altaica
ENSSTOG00000014635	SNRNP48	100	97.000	ENSPTRG00000017703	SNRNP48	100	94.690	Pan_troglodytes
ENSSTOG00000014635	SNRNP48	100	97.000	ENSPANG00000000771	SNRNP48	100	94.690	Papio_anubis
ENSSTOG00000014635	SNRNP48	94	46.291	ENSPKIG00000013703	snrnp48	59	50.000	Paramormyrops_kingsleyae
ENSSTOG00000014635	SNRNP48	88	61.709	ENSPSIG00000002213	SNRNP48	97	61.709	Pelodiscus_sinensis
ENSSTOG00000014635	SNRNP48	72	48.980	ENSPMGG00000008120	snrnp48	86	48.980	Periophthalmus_magnuspinnatus
ENSSTOG00000014635	SNRNP48	100	92.330	ENSPEMG00000008872	Snrnp48	100	91.445	Peromyscus_maniculatus_bairdii
ENSSTOG00000014635	SNRNP48	95	44.817	ENSPFOG00000003578	snrnp48	93	45.266	Poecilia_formosa
ENSSTOG00000014635	SNRNP48	68	50.000	ENSPLAG00000002290	snrnp48	79	50.000	Poecilia_latipinna
ENSSTOG00000014635	SNRNP48	95	44.207	ENSPMEG00000018033	snrnp48	93	44.675	Poecilia_mexicana
ENSSTOG00000014635	SNRNP48	73	50.199	ENSPREG00000018541	snrnp48	80	48.936	Poecilia_reticulata
ENSSTOG00000014635	SNRNP48	100	96.000	ENSPPYG00000016209	SNRNP48	100	93.215	Pongo_abelii
ENSSTOG00000014635	SNRNP48	73	85.714	ENSPCAG00000011991	SNRNP48	99	71.910	Procavia_capensis
ENSSTOG00000014635	SNRNP48	100	93.000	ENSPVAG00000002854	SNRNP48	100	90.855	Pteropus_vampyrus
ENSSTOG00000014635	SNRNP48	76	48.659	ENSPNYG00000015399	snrnp48	92	46.599	Pundamilia_nyererei
ENSSTOG00000014635	SNRNP48	100	91.000	ENSRNOG00000013756	Snrnp48	100	89.971	Rattus_norvegicus
ENSSTOG00000014635	SNRNP48	91	93.871	ENSRBIG00000043856	SNRNP48	97	94.408	Rhinopithecus_bieti
ENSSTOG00000014635	SNRNP48	100	97.000	ENSRROG00000043229	SNRNP48	100	94.395	Rhinopithecus_roxellana
ENSSTOG00000014635	SNRNP48	100	96.000	ENSSBOG00000019486	SNRNP48	100	93.805	Saimiri_boliviensis_boliviensis
ENSSTOG00000014635	SNRNP48	98	71.512	ENSSHAG00000014483	SNRNP48	99	71.512	Sarcophilus_harrisii
ENSSTOG00000014635	SNRNP48	74	50.787	ENSSFOG00015006610	snrnp48	70	48.822	Scleropages_formosus
ENSSTOG00000014635	SNRNP48	84	46.528	ENSSDUG00000014953	snrnp48	92	43.027	Seriola_dumerili
ENSSTOG00000014635	SNRNP48	84	47.811	ENSSLDG00000005989	snrnp48	92	43.323	Seriola_lalandi_dorsalis
ENSSTOG00000014635	SNRNP48	98	58.739	ENSSPUG00000006257	SNRNP48	85	64.765	Sphenodon_punctatus
ENSSTOG00000014635	SNRNP48	78	48.540	ENSSPAG00000006454	snrnp48	80	48.214	Stegastes_partitus
ENSSTOG00000014635	SNRNP48	83	64.261	ENSTGUG00000007575	SNRNP48	93	64.261	Taeniopygia_guttata
ENSSTOG00000014635	SNRNP48	71	51.029	ENSTRUG00000007031	snrnp48	80	49.635	Takifugu_rubripes
ENSSTOG00000014635	SNRNP48	91	42.308	ENSTNIG00000012977	-	76	46.094	Tetraodon_nigroviridis
ENSSTOG00000014635	SNRNP48	100	89.349	ENSTBEG00000015620	SNRNP48	100	76.401	Tupaia_belangeri
ENSSTOG00000014635	SNRNP48	100	90.265	ENSTTRG00000016715	SNRNP48	100	90.265	Tursiops_truncatus
ENSSTOG00000014635	SNRNP48	100	92.330	ENSUAMG00000003690	SNRNP48	100	92.330	Ursus_americanus
ENSSTOG00000014635	SNRNP48	85	88.153	ENSVPAG00000003557	SNRNP48	100	88.153	Vicugna_pacos
ENSSTOG00000014635	SNRNP48	99	93.452	ENSVVUG00000004996	SNRNP48	99	93.452	Vulpes_vulpes
ENSSTOG00000014635	SNRNP48	86	52.824	ENSXETG00000020447	snrnp48	97	49.853	Xenopus_tropicalis
ENSSTOG00000014635	SNRNP48	69	49.787	ENSXCOG00000004478	snrnp48	69	51.304	Xiphophorus_couchianus
ENSSTOG00000014635	SNRNP48	83	48.239	ENSXMAG00000013595	snrnp48	81	44.785	Xiphophorus_maculatus