EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSTOG00000014640 (Gene tree)
Gene ID: 101973009
Gene Symbol: SRRM1
Alias: MGC39488|POP101|SRM160
Full Name: serine and arginine repetitive matrix 1
Gene Type: protein_coding
Species: Ictidomys_tridecemlineatus
Status: putative
Strand: Plus strand
Length: 29256 bases
Position: chrJH393284.1:9572974-9602229
Accession: 101973009
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSTOP00000015320	PWI	PF01480.17	5.7e-30	1	1
ENSSTOP00000015123	PWI	PF01480.17	5.8e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSTOT00000021846	SRRM1-202	4000	XM_005317616	ENSSTOP00000015123	918 (aa)	XP_005317673	I3MSM8
ENSSTOT00000027671	SRRM1-201	3967	XM_005317619	ENSSTOP00000015320	904 (aa)	XP_005317676	I3MT75

Gene Model

Click here to download ENSSTOG00000014640's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSTOG00000014640's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSTOG00000014640	SRRM1	100	98.562	ENSG00000133226	SRRM1	100	100.000	Homo_sapiens
ENSSTOG00000014640	SRRM1	100	97.495	ENSAMEG00000010075	SRRM1	100	97.495	Ailuropoda_melanoleuca
ENSSTOG00000014640	SRRM1	60	65.320	ENSAPLG00000002066	SRRM1	59	76.868	Anas_platyrhynchos
ENSSTOG00000014640	SRRM1	100	97.821	ENSANAG00000035606	SRRM1	100	97.821	Aotus_nancymaae
ENSSTOG00000014640	SRRM1	100	97.456	ENSBTAG00000013772	SRRM1	100	97.456	Bos_taurus
ENSSTOG00000014640	SRRM1	100	96.950	ENSCJAG00000020822	SRRM1	100	97.077	Callithrix_jacchus
ENSSTOG00000014640	SRRM1	89	88.447	ENSCAFG00020000003	-	99	88.447	Canis_lupus_dingo
ENSSTOG00000014640	SRRM1	100	98.119	ENSCAFG00020020948	SRRM1	100	98.119	Canis_lupus_dingo
ENSSTOG00000014640	SRRM1	100	96.179	ENSCHIG00000014656	SRRM1	100	96.179	Capra_hircus
ENSSTOG00000014640	SRRM1	100	98.230	ENSTSYG00000006782	SRRM1	100	98.230	Carlito_syrichta
ENSSTOG00000014640	SRRM1	99	95.170	ENSCAPG00000011473	SRRM1	100	95.170	Cavia_aperea
ENSSTOG00000014640	SRRM1	100	96.078	ENSCPOG00000015594	SRRM1	100	96.078	Cavia_porcellus
ENSSTOG00000014640	SRRM1	100	97.566	ENSCCAG00000029474	SRRM1	100	97.566	Cebus_capucinus
ENSSTOG00000014640	SRRM1	100	98.119	ENSCATG00000031303	SRRM1	100	98.119	Cercocebus_atys
ENSSTOG00000014640	SRRM1	100	97.277	ENSCLAG00000014592	SRRM1	100	97.277	Chinchilla_lanigera
ENSSTOG00000014640	SRRM1	74	97.500	ENSCHOG00000000027	SRRM1	73	97.500	Choloepus_hoffmanni
ENSSTOG00000014640	SRRM1	100	98.119	ENSCANG00000028271	SRRM1	100	98.119	Colobus_angolensis_palliatus
ENSSTOG00000014640	SRRM1	96	93.326	ENSDNOG00000049141	SRRM1	98	93.326	Dasypus_novemcinctus
ENSSTOG00000014640	SRRM1	100	97.386	ENSEASG00005004270	SRRM1	100	97.386	Equus_asinus_asinus
ENSSTOG00000014640	SRRM1	100	97.566	ENSECAG00000026981	SRRM1	100	97.566	Equus_caballus
ENSSTOG00000014640	SRRM1	100	98.119	ENSFCAG00000000678	-	100	98.119	Felis_catus
ENSSTOG00000014640	SRRM1	100	97.821	ENSFDAG00000009903	SRRM1	100	97.821	Fukomys_damarensis
ENSSTOG00000014640	SRRM1	100	98.451	ENSGGOG00000005209	SRRM1	100	98.451	Gorilla_gorilla
ENSSTOG00000014640	SRRM1	100	97.930	ENSHGLG00000017105	SRRM1	100	97.930	Heterocephalus_glaber_female
ENSSTOG00000014640	SRRM1	99	97.444	ENSHGLG00100016772	SRRM1	99	97.444	Heterocephalus_glaber_male
ENSSTOG00000014640	SRRM1	100	94.698	ENSLAFG00000013830	SRRM1	100	94.698	Loxodonta_africana
ENSSTOG00000014640	SRRM1	86	77.963	ENSMFAG00000038841	-	61	78.873	Macaca_fascicularis
ENSSTOG00000014640	SRRM1	100	98.257	ENSMFAG00000025726	SRRM1	100	98.257	Macaca_fascicularis
ENSSTOG00000014640	SRRM1	100	98.119	ENSMMUG00000006645	SRRM1	100	98.119	Macaca_mulatta
ENSSTOG00000014640	SRRM1	55	79.276	ENSMMUG00000039269	-	59	78.672	Macaca_mulatta
ENSSTOG00000014640	SRRM1	100	98.230	ENSMNEG00000039415	SRRM1	100	98.230	Macaca_nemestrina
ENSSTOG00000014640	SRRM1	59	69.216	ENSMLEG00000032221	-	61	71.863	Mandrillus_leucophaeus
ENSSTOG00000014640	SRRM1	72	100.000	ENSMLEG00000038030	-	100	90.632	Mandrillus_leucophaeus
ENSSTOG00000014640	SRRM1	100	98.475	ENSMICG00000006553	SRRM1	100	98.475	Microcebus_murinus
ENSSTOG00000014640	SRRM1	100	94.378	ENSNGAG00000014562	Srrm1	100	95.892	Nannospalax_galili
ENSSTOG00000014640	SRRM1	100	98.562	ENSNLEG00000008966	SRRM1	100	98.562	Nomascus_leucogenys
ENSSTOG00000014640	SRRM1	75	81.641	ENSMEUG00000014704	SRRM1	60	88.624	Notamacropus_eugenii
ENSSTOG00000014640	SRRM1	100	96.526	ENSOCUG00000008438	SRRM1	100	96.526	Oryctolagus_cuniculus
ENSSTOG00000014640	SRRM1	100	97.712	ENSOGAG00000010210	SRRM1	100	97.712	Otolemur_garnettii
ENSSTOG00000014640	SRRM1	92	97.759	ENSOARG00000006453	SRRM1	99	97.759	Ovis_aries
ENSSTOG00000014640	SRRM1	100	98.451	ENSPPAG00000043918	SRRM1	100	98.451	Pan_paniscus
ENSSTOG00000014640	SRRM1	100	98.119	ENSPPRG00000002509	SRRM1	100	98.119	Panthera_pardus
ENSSTOG00000014640	SRRM1	100	90.761	ENSPTIG00000008778	-	100	90.761	Panthera_tigris_altaica
ENSSTOG00000014640	SRRM1	100	98.584	ENSPTRG00000000349	SRRM1	100	98.584	Pan_troglodytes
ENSSTOG00000014640	SRRM1	100	97.473	ENSPANG00000010194	SRRM1	100	97.473	Papio_anubis
ENSSTOG00000014640	SRRM1	55	77.621	ENSPANG00000035568	-	59	76.613	Papio_anubis
ENSSTOG00000014640	SRRM1	100	97.715	ENSPPYG00000001716	SRRM1	100	97.715	Pongo_abelii
ENSSTOG00000014640	SRRM1	100	98.041	ENSPCOG00000021311	SRRM1	100	98.041	Propithecus_coquereli
ENSSTOG00000014640	SRRM1	100	97.712	ENSPVAG00000005836	SRRM1	100	97.712	Pteropus_vampyrus
ENSSTOG00000014640	SRRM1	100	98.230	ENSRROG00000035151	SRRM1	100	98.230	Rhinopithecus_roxellana
ENSSTOG00000014640	SRRM1	100	96.187	ENSSBOG00000019884	SRRM1	99	100.000	Saimiri_boliviensis_boliviensis
ENSSTOG00000014640	SRRM1	61	95.410	ENSSARG00000013718	SRRM1	60	95.410	Sorex_araneus
ENSSTOG00000014640	SRRM1	60	71.184	ENSSPUG00000015890	SRRM1	57	82.472	Sphenodon_punctatus
ENSSTOG00000014640	SRRM1	99	97.695	ENSSSCG00000032947	SRRM1	100	97.611	Sus_scrofa
ENSSTOG00000014640	SRRM1	100	97.495	ENSTBEG00000000100	SRRM1	100	97.495	Tupaia_belangeri
ENSSTOG00000014640	SRRM1	99	97.036	ENSTTRG00000009365	SRRM1	100	97.036	Tursiops_truncatus
ENSSTOG00000014640	SRRM1	88	98.747	ENSUMAG00000013121	SRRM1	95	98.747	Ursus_maritimus
ENSSTOG00000014640	SRRM1	96	93.764	ENSVPAG00000007698	SRRM1	100	93.764	Vicugna_pacos
ENSSTOG00000014640	SRRM1	99	95.307	ENSVVUG00000026966	SRRM1	97	95.307	Vulpes_vulpes