EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSTOG00000016033 (Gene tree)
Gene ID: 101961783
Gene Symbol: RC3H1
Alias: KIAA2025|RNF198|RP5-1198E17.5|roquin
Full Name: ring finger and CCCH-type domains 1
Gene Type: protein_coding
Species: Ictidomys_tridecemlineatus
Status: putative
Strand: Plus strand
Length: 47421 bases
Position: chrJH393291.1:13919257-13966677
Accession: 101961783
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSTOP00000014349	zf-CCCH	PF00642.24	0.00019	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSTOT00000016033	RC3H1-201	3592	XM_005319784	ENSSTOP00000014349	1130 (aa)	XP_005319841	I3MQT0

Gene Model

Click here to download ENSSTOG00000016033's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSTOG00000016033's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSTOG00000016033	RC3H1	92	54.296	ENSSTOG00000010655	RC3H2	87	53.846

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSTOG00000016033	RC3H1	100	96.649	ENSG00000135870	RC3H1	100	96.649	Homo_sapiens
ENSSTOG00000016033	RC3H1	100	96.028	ENSAMEG00000015657	RC3H1	100	96.028	Ailuropoda_melanoleuca
ENSSTOG00000016033	RC3H1	100	87.260	ENSAPLG00000005341	RC3H1	100	86.900	Anas_platyrhynchos
ENSSTOG00000016033	RC3H1	100	84.629	ENSACAG00000015271	RC3H1	100	84.077	Anolis_carolinensis
ENSSTOG00000016033	RC3H1	100	96.561	ENSANAG00000036716	RC3H1	100	96.561	Aotus_nancymaae
ENSSTOG00000016033	RC3H1	100	94.709	ENSBTAG00000052708	RC3H1	100	94.709	Bos_taurus
ENSSTOG00000016033	RC3H1	100	96.208	ENSCJAG00000009106	RC3H1	100	96.208	Callithrix_jacchus
ENSSTOG00000016033	RC3H1	100	96.293	ENSCAFG00000014434	RC3H1	100	96.293	Canis_familiaris
ENSSTOG00000016033	RC3H1	100	96.208	ENSCAFG00020017112	RC3H1	99	97.978	Canis_lupus_dingo
ENSSTOG00000016033	RC3H1	100	95.587	ENSCHIG00000002873	RC3H1	100	95.587	Capra_hircus
ENSSTOG00000016033	RC3H1	99	94.704	ENSTSYG00000003913	RC3H1	99	94.704	Carlito_syrichta
ENSSTOG00000016033	RC3H1	100	91.534	ENSCPOG00000004349	RC3H1	100	91.270	Cavia_porcellus
ENSSTOG00000016033	RC3H1	100	93.739	ENSCCAG00000025652	RC3H1	100	93.739	Cebus_capucinus
ENSSTOG00000016033	RC3H1	100	96.649	ENSCATG00000033497	RC3H1	100	96.649	Cercocebus_atys
ENSSTOG00000016033	RC3H1	100	94.533	ENSCLAG00000011267	RC3H1	100	94.533	Chinchilla_lanigera
ENSSTOG00000016033	RC3H1	96	96.412	ENSCSAG00000011823	RC3H1	85	96.412	Chlorocebus_sabaeus
ENSSTOG00000016033	RC3H1	100	89.025	ENSCPBG00000014670	RC3H1	100	87.972	Chrysemys_picta_bellii
ENSSTOG00000016033	RC3H1	100	96.652	ENSCANG00000032120	RC3H1	100	96.652	Colobus_angolensis_palliatus
ENSSTOG00000016033	RC3H1	100	94.523	ENSCGRG00001020812	Rc3h1	100	93.993	Cricetulus_griseus_chok1gshd
ENSSTOG00000016033	RC3H1	100	94.523	ENSCGRG00000011952	Rc3h1	100	93.993	Cricetulus_griseus_crigri
ENSSTOG00000016033	RC3H1	55	93.098	ENSDNOG00000011494	RC3H1	99	93.098	Dasypus_novemcinctus
ENSSTOG00000016033	RC3H1	100	95.760	ENSDORG00000004855	Rc3h1	100	95.318	Dipodomys_ordii
ENSSTOG00000016033	RC3H1	82	95.694	ENSETEG00000012064	RC3H1	87	95.096	Echinops_telfairi
ENSSTOG00000016033	RC3H1	100	94.704	ENSEASG00005017000	RC3H1	100	94.704	Equus_asinus_asinus
ENSSTOG00000016033	RC3H1	100	94.528	ENSECAG00000021208	RC3H1	100	94.528	Equus_caballus
ENSSTOG00000016033	RC3H1	83	96.218	ENSEEUG00000014861	RC3H1	88	85.274	Erinaceus_europaeus
ENSSTOG00000016033	RC3H1	100	96.737	ENSFCAG00000014924	RC3H1	100	96.737	Felis_catus
ENSSTOG00000016033	RC3H1	100	86.626	ENSFALG00000002947	RC3H1	100	85.989	Ficedula_albicollis
ENSSTOG00000016033	RC3H1	100	94.797	ENSFDAG00000013303	RC3H1	100	94.885	Fukomys_damarensis
ENSSTOG00000016033	RC3H1	100	86.404	ENSGALG00000004587	RC3H1	100	86.040	Gallus_gallus
ENSSTOG00000016033	RC3H1	100	87.357	ENSGAGG00000018194	RC3H1	100	86.831	Gopherus_agassizii
ENSSTOG00000016033	RC3H1	100	89.807	ENSGGOG00000005735	RC3H1	100	89.807	Gorilla_gorilla
ENSSTOG00000016033	RC3H1	88	88.633	ENSHGLG00000004183	-	99	88.587	Heterocephalus_glaber_female
ENSSTOG00000016033	RC3H1	100	93.651	ENSHGLG00100008577	RC3H1	100	93.739	Heterocephalus_glaber_male
ENSSTOG00000016033	RC3H1	100	95.495	ENSJJAG00000018915	Rc3h1	100	95.141	Jaculus_jaculus
ENSSTOG00000016033	RC3H1	100	75.196	ENSLACG00000016186	RC3H1	100	77.358	Latimeria_chalumnae
ENSSTOG00000016033	RC3H1	97	96.539	ENSLAFG00000004367	RC3H1	100	96.539	Loxodonta_africana
ENSSTOG00000016033	RC3H1	100	96.561	ENSMFAG00000033725	RC3H1	100	96.561	Macaca_fascicularis
ENSSTOG00000016033	RC3H1	100	96.561	ENSMMUG00000000630	RC3H1	100	96.561	Macaca_mulatta
ENSSTOG00000016033	RC3H1	100	96.649	ENSMNEG00000035968	RC3H1	100	96.649	Macaca_nemestrina
ENSSTOG00000016033	RC3H1	100	96.561	ENSMLEG00000037455	RC3H1	100	96.561	Mandrillus_leucophaeus
ENSSTOG00000016033	RC3H1	88	94.657	ENSMAUG00000020864	Rc3h1	93	94.052	Mesocricetus_auratus
ENSSTOG00000016033	RC3H1	100	96.734	ENSMICG00000003000	RC3H1	100	96.734	Microcebus_murinus
ENSSTOG00000016033	RC3H1	93	93.649	ENSMOCG00000016587	Rc3h1	98	92.986	Microtus_ochrogaster
ENSSTOG00000016033	RC3H1	100	92.070	ENSMODG00000004289	RC3H1	100	91.806	Monodelphis_domestica
ENSSTOG00000016033	RC3H1	100	93.551	MGP_CAROLIEiJ_G0014756	Rc3h1	100	93.021	Mus_caroli
ENSSTOG00000016033	RC3H1	100	93.286	ENSMUSG00000040423	Rc3h1	100	92.845	Mus_musculus
ENSSTOG00000016033	RC3H1	100	93.198	MGP_PahariEiJ_G0027992	Rc3h1	100	92.668	Mus_pahari
ENSSTOG00000016033	RC3H1	100	93.110	MGP_SPRETEiJ_G0015563	Rc3h1	100	92.668	Mus_spretus
ENSSTOG00000016033	RC3H1	100	96.201	ENSMPUG00000004747	RC3H1	100	96.201	Mustela_putorius_furo
ENSSTOG00000016033	RC3H1	100	94.876	ENSMLUG00000011127	RC3H1	100	94.876	Myotis_lucifugus
ENSSTOG00000016033	RC3H1	100	95.848	ENSNGAG00000011135	Rc3h1	100	95.406	Nannospalax_galili
ENSSTOG00000016033	RC3H1	100	96.649	ENSNLEG00000015327	RC3H1	100	96.649	Nomascus_leucogenys
ENSSTOG00000016033	RC3H1	99	82.478	ENSOPRG00000013068	RC3H1	99	82.478	Ochotona_princeps
ENSSTOG00000016033	RC3H1	100	94.092	ENSODEG00000014185	RC3H1	100	94.004	Octodon_degus
ENSSTOG00000016033	RC3H1	100	90.750	ENSOANG00000000924	RC3H1	100	90.401	Ornithorhynchus_anatinus
ENSSTOG00000016033	RC3H1	99	94.897	ENSOCUG00000004930	RC3H1	98	94.987	Oryctolagus_cuniculus
ENSSTOG00000016033	RC3H1	100	89.339	ENSOGAG00000004044	RC3H1	100	89.075	Otolemur_garnettii
ENSSTOG00000016033	RC3H1	100	95.706	ENSOARG00000013011	RC3H1	100	95.706	Ovis_aries
ENSSTOG00000016033	RC3H1	100	96.652	ENSPPAG00000039253	RC3H1	100	96.652	Pan_paniscus
ENSSTOG00000016033	RC3H1	100	95.940	ENSPPRG00000009007	RC3H1	100	95.940	Panthera_pardus
ENSSTOG00000016033	RC3H1	100	96.309	ENSPTIG00000015326	RC3H1	100	96.309	Panthera_tigris_altaica
ENSSTOG00000016033	RC3H1	100	96.652	ENSPTRG00000001702	RC3H1	100	96.652	Pan_troglodytes
ENSSTOG00000016033	RC3H1	100	96.649	ENSPANG00000008886	RC3H1	100	96.649	Papio_anubis
ENSSTOG00000016033	RC3H1	100	88.431	ENSPSIG00000016181	RC3H1	100	88.344	Pelodiscus_sinensis
ENSSTOG00000016033	RC3H1	100	94.346	ENSPEMG00000011966	Rc3h1	100	93.816	Peromyscus_maniculatus_bairdii
ENSSTOG00000016033	RC3H1	70	93.932	ENSPCIG00000002058	RC3H1	95	98.655	Phascolarctos_cinereus
ENSSTOG00000016033	RC3H1	100	93.298	ENSPPYG00000000490	RC3H1	98	95.698	Pongo_abelii
ENSSTOG00000016033	RC3H1	81	100.000	ENSPCAG00000010775	RC3H1	87	100.000	Procavia_capensis
ENSSTOG00000016033	RC3H1	83	96.047	ENSPCOG00000021795	RC3H1	96	96.047	Propithecus_coquereli
ENSSTOG00000016033	RC3H1	94	100.000	ENSPVAG00000007593	RC3H1	100	87.026	Pteropus_vampyrus
ENSSTOG00000016033	RC3H1	97	61.695	ENSPNAG00000023439	rc3h1a	95	90.991	Pygocentrus_nattereri
ENSSTOG00000016033	RC3H1	100	96.564	ENSRBIG00000037743	RC3H1	100	96.564	Rhinopithecus_bieti
ENSSTOG00000016033	RC3H1	100	96.473	ENSRROG00000036546	RC3H1	100	96.473	Rhinopithecus_roxellana
ENSSTOG00000016033	RC3H1	93	86.850	ENSSBOG00000010664	RC3H1	100	89.773	Saimiri_boliviensis_boliviensis
ENSSTOG00000016033	RC3H1	100	91.021	ENSSHAG00000007589	RC3H1	100	90.669	Sarcophilus_harrisii
ENSSTOG00000016033	RC3H1	87	86.486	ENSSARG00000004660	RC3H1	86	86.486	Sorex_araneus
ENSSTOG00000016033	RC3H1	100	83.699	ENSSPUG00000018472	RC3H1	100	83.509	Sphenodon_punctatus
ENSSTOG00000016033	RC3H1	100	96.734	ENSSSCG00000015498	RC3H1	100	96.734	Sus_scrofa
ENSSTOG00000016033	RC3H1	100	87.445	ENSTGUG00000004090	RC3H1	100	87.170	Taeniopygia_guttata
ENSSTOG00000016033	RC3H1	88	96.594	ENSTBEG00000005015	RC3H1	89	96.594	Tupaia_belangeri
ENSSTOG00000016033	RC3H1	100	95.070	ENSTTRG00000008572	RC3H1	100	95.070	Tursiops_truncatus
ENSSTOG00000016033	RC3H1	100	95.410	ENSUAMG00000019525	RC3H1	100	94.969	Ursus_americanus
ENSSTOG00000016033	RC3H1	100	95.944	ENSUMAG00000020087	RC3H1	100	95.944	Ursus_maritimus
ENSSTOG00000016033	RC3H1	91	98.423	ENSVPAG00000002591	RC3H1	92	98.423	Vicugna_pacos
ENSSTOG00000016033	RC3H1	100	95.866	ENSVVUG00000014201	RC3H1	100	95.866	Vulpes_vulpes
ENSSTOG00000016033	RC3H1	100	78.590	ENSXETG00000020030	rc3h1	100	78.136	Xenopus_tropicalis